PMC Links for Gene (Select 39952) - PMC

Christopher P. Caridi, Carla D’Agostino, Taehyun Ryu, Grzegorz Zapotoczny, Laetitia Delabaere, Xiao Li, Varandt Y. Khodaverdian, Nuno Amaral, Emily Lin, Alesandra Rau, Irene Chiolo

Nature. Author manuscript; available in PMC 2018 Dec 20.

Published in final edited form as: Nature. 2018 Jul; 559(7712): 54–60. Published online 2018 Jun 20. doi: 10.1038/s41586-018-0242-8

PMCID:: PMC6051730

Abstract Article PDF–4.8M

Select item 34185844.

Condensins: universal organizers of chromosomes with diverse functions

Tatsuya Hirano

Genes Dev. 2012 Aug 1; 26(15): 1659–1678. doi: 10.1101/gad.194746.112

PMCID:: PMC3418584

Abstract Article PDF–2.5M

Select item 34171435.

Double-Strand Breaks in Heterochromatin Move Outside of a Dynamic HP1a Domain to Complete Recombinational Repair

Irene Chiolo, Aki Minoda, Serafin U. Colmenares, Aris Polyzos, Sylvain V. Costes, Gary H. Karpen

Cell. Author manuscript; available in PMC 2012 Aug 12.

Published in final edited form as: Cell. 2011 Mar 4; 144(5): 732–744. Published online 2011 Feb 25. doi: 10.1016/j.cell.2011.02.012

PMCID:: PMC3417143

Abstract Article PDF–3.1M

Select item 55774696.

And yet, it moves: nuclear and chromatin dynamics of a heterochromatic double-strand break

P. Christopher Caridi, Laetitia Delabaere, Grzegorz Zapotoczny, Irene Chiolo

Philos Trans R Soc Lond B Biol Sci. 2017 Oct 5; 372(1731): 20160291. Published online 2017 Aug 28. doi: 10.1098/rstb.2016.0291

PMCID:: PMC5577469

Abstract Article PDF–913K

Select item 52853257.

Nuclear Dynamics of Heterochromatin Repair

Nuno Amaral, Taehyun Ryu, Xiao Li, Irene Chiolo

Trends Genet. Author manuscript; available in PMC 2018 Feb 1.

Published in final edited form as: Trends Genet. 2017 Feb; 33(2): 86–100. Published online 2017 Jan 16. doi: 10.1016/j.tig.2016.12.004

PMCID:: PMC5285325

Abstract Article PDF–854K

Select item 46285858.

Heterochromatic breaks move to the nuclear periphery to continue recombinational repair

Taehyun Ryu, Brett Spatola, Laetitia Delabaere, Katherine Bowlin, Hannah Hopp, Ryan Kunitake, Gary H. Karpen, Irene Chiolo

Nat Cell Biol. Author manuscript; available in PMC 2016 May 1.

Published in final edited form as: Nat Cell Biol. 2015 Nov; 17(11): 1401–1411. Published online 2015 Oct 26. doi: 10.1038/ncb3258

PMCID:: PMC4628585

Abstract Article PDF–2.5M

Select item 4036829.

Asymmetric Sequence Divergence of Duplicate Genes

Gavin C. Conant, Andreas Wagner

Genome Res. 2003 Sep; 13(9): 2052–2058. doi: 10.1101/gr.1252603

PMCID:: PMC403682

Abstract Article PDF–212K

Select item 18756610.

Retroposed New Genes Out of the X in Drosophila

Esther Betrán, Kevin Thornton, Manyuan Long

Genome Res. 2002 Dec; 12(12): 1854–1859. doi: 10.1101/gr.604902

PMCID:: PMC187566

Abstract Article PDF–162K

Select item 265782611.

Burst of Young Retrogenes and Independent Retrogene Formation in Mammals

Deng Pan, Liqing Zhang

PLoS One. 2009; 4(3): e5040. Published online 2009 Mar 27. doi: 10.1371/journal.pone.0005040

PMCID:: PMC2657826

Abstract Article PDF–235K

Select item 183913112.

Comparative genomics reveals a constant rate of origination and convergent acquisition of functional retrogenes in Drosophila

Yongsheng Bai, Claudio Casola, Cédric Feschotte, Esther Betrán

Genome Biol. 2007; 8(1): R11. Published online 2007 Jan 18. doi: 10.1186/gb-2007-8-1-r11

PMCID:: PMC1839131

Abstract Article PDF–274K

Select item 639850113.

SOD1 activity threshold and TOR signalling modulate VAP(P58S) aggregation via reactive oxygen species-induced proteasomal degradation in a Drosophila model of amyotrophic lateral sclerosis

Kriti Chaplot, Lokesh Pimpale, Balaji Ramalingam, Senthilkumar Deivasigamani, Siddhesh S. Kamat, Girish S. Ratnaparkhi

Dis Model Mech. 2019 Feb 1; 12(2): dmm033803. Published online 2019 Feb 7. doi: 10.1242/dmm.033803

PMCID:: PMC6398501

Abstract Article

Select item 696157814.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 353067715.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 570780516.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900217.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 435288718.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 282505319.

Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin

Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker

Science. Author manuscript; available in PMC 2010 Feb 19.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816

PMCID:: PMC2825053

Abstract Article PDF–858K

Select item 281928020.

The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin

Christopher D. Smith, ShengQiang Shu, Christopher J. Mungall, Gary H. Karpen

Science. Author manuscript; available in PMC 2010 Feb 10.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1586. doi: 10.1126/science.1139815

Correction in:: volume 317 on page 1325

PMCID:: PMC2819280

Abstract Article PDF–1.3M

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