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Items: 1 to 20 of 22

1.
Activation of endoplasmic reticulum stress response during the development of ischemic heart disease
Asim Azfer, Jianli Niu, Linda M. Rogers, Frances M. Adamski, Pappachan E. Kolattukudy
Am J Physiol Heart Circ Physiol. Author manuscript; available in PMC 2007 Sep 1.
Published in final edited form as: Am J Physiol Heart Circ Physiol. 2006 Sep; 291(3): H1411–H1420. Published online 2006 Apr 14. doi: 10.1152/ajpheart.01378.2005
PMCID:
PMC1575464
AbstractArticlePDF–1.1M
2.
Screening UFMylation-associated genes in heart tissues of Ufm1-transgenic mice
Hu Jiajia, Yang Ziyao, Zheng Jiaqi, Chen Yanli, Zhao Xiaotao, Su Ming
BMC Cardiovasc Disord. 2023; 23: 567. Published online 2023 Nov 18. doi: 10.1186/s12872-023-03563-7
PMCID:
PMC10657630
AbstractArticlePDF–1.2M
3.
Ubiquitin fold modifier 1 activates NF-κB pathway by down-regulating LZAP expression in the macrophage of diabetic mouse model
Xiaolei Hu, Hengyan Zhang, Yuan Song, Langen Zhuang, Qingqing Yang, Minglin Pan, Fengling Chen
Biosci Rep. 2020 Jan 31; 40(1): BSR20191672. Published online 2020 Jan 2. doi: 10.1042/BSR20191672
PMCID:
PMC6944655
AbstractArticlePDF–1.0M
4.
Ufmylation and FATylation Pathways are Down Regulated in Human Alcoholic and Non Alcoholic Steatohepatitis, and Mice Fed DDC, where Mallory-Denk Bodies (MDBs) Form
H Liu, J Li, B Tillman, BA French, SW French
Exp Mol Pathol. Author manuscript; available in PMC 2015 Aug 1.
Published in final edited form as: Exp Mol Pathol. 2014 Aug; 97(1): 81–88. Published online 2014 Jun 2. doi: 10.1016/j.yexmp.2014.05.010
PMCID:
PMC4127344
AbstractArticlePDF–1013K
5.
UFMylation inhibits the proinflammatory capacity of interferon-γ–activated macrophages
Dale R. Balce, Ya-Ting Wang, Michael R. McAllaster, Bria F. Dunlap, Anthony Orvedahl, Barry L. Hykes, Jr, Lindsay Droit, Scott A. Handley, Craig B. Wilen, John G. Doench, Robert C. Orchard, Christina L. Stallings, Herbert W. Virgin
Proc Natl Acad Sci U S A. 2021 Jan 5; 118(1): e2011763118. Published online 2020 Dec 28. doi: 10.1073/pnas.2011763118
PMCID:
PMC7817147
AbstractArticlePDF–1.5M
6.
Biallelic Variants in UBA5 Link Dysfunctional UFM1 Ubiquitin-like Modifier Pathway to Severe Infantile-Onset Encephalopathy
Mikko Muona, Ryosuke Ishimura, Anni Laari, Yoshinobu Ichimura, Tarja Linnankivi, Riikka Keski-Filppula, Riitta Herva, Heikki Rantala, Anders Paetau, Minna Pöyhönen, Miki Obata, Takefumi Uemura, Thomas Karhu, Norihisa Bizen, Hirohide Takebayashi, Shane McKee, Michael J. Parker, Nadia Akawi, Jeremy McRae, Matthew E. Hurles, the DDD Study, Outi Kuismin, Mitja I. Kurki, Anna-Kaisa Anttonen, Keiji Tanaka, Aarno Palotie, Satoshi Waguri, Anna-Elina Lehesjoki, Masaaki Komatsu
Am J Hum Genet. 2016 Sep 1; 99(3): 683–694. Published online 2016 Aug 18. doi: 10.1016/j.ajhg.2016.06.020
PMCID:
PMC5010641
AbstractArticlePDF–1.5M
7.
The UFM1 system regulates ER-phagy through the ufmylation of CYB5R3
Ryosuke Ishimura, Afnan H. El-Gowily, Daisuke Noshiro, Satoko Komatsu-Hirota, Yasuko Ono, Mayumi Shindo, Tomohisa Hatta, Manabu Abe, Takefumi Uemura, Hyeon-Cheol Lee-Okada, Tarek M. Mohamed, Takehiko Yokomizo, Takashi Ueno, Kenji Sakimura, Tohru Natsume, Hiroyuki Sorimachi, Toshifumi Inada, Satoshi Waguri, Nobuo N. Noda, Masaaki Komatsu
Nat Commun. 2022; 13: 7857. Published online 2022 Dec 21. doi: 10.1038/s41467-022-35501-0
PMCID:
PMC9772183
AbstractArticlePDF–4.1M
8.
Ubiquitin Fold Modifier 1 (UFM1) and Its Target UFBP1 Protect Pancreatic Beta Cells from ER Stress-Induced Apoptosis
Katleen Lemaire, Rodrigo F. Moura, Mikaela Granvik, Mariana Igoillo-Esteve, Hans E. Hohmeier, Nico Hendrickx, Christopher B. Newgard, Etienne Waelkens, Miriam Cnop, Frans Schuit
PLoS One. 2011; 6(4): e18517. Published online 2011 Apr 6. doi: 10.1371/journal.pone.0018517
PMCID:
PMC3071830
AbstractArticlePDF–955K
9.
A Novel Type of E3 Ligase for the Ufm1 Conjugation System
Kanako Tatsumi, Yu-shin Sou, Norihiro Tada, Eri Nakamura, Shun-ichiro Iemura, Tohru Natsume, Sung Hwan Kang, Chin Ha Chung, Masanori Kasahara, Eiki Kominami, Masayuki Yamamoto, Keiji Tanaka, Masaaki Komatsu
J Biol Chem. 2010 Feb 19; 285(8): 5417–5427. Published online 2009 Dec 14. doi: 10.1074/jbc.M109.036814
PMCID:
PMC2820770
AbstractArticlePDF–3.5M
10.
Breakdown of the reciprocal stabilization of QBRICK/Frem1, Fras1, and Frem2 at the basement membrane provokes Fraser syndrome-like defects
Daiji Kiyozumi, Nagisa Sugimoto, Kiyotoshi Sekiguchi
Proc Natl Acad Sci U S A. 2006 Aug 8; 103(32): 11981–11986. Published online 2006 Jul 31. doi: 10.1073/pnas.0601011103
PMCID:
PMC1567684
AbstractArticlePDF–2.3M
11.
Transcriptional Regulation of the Ufm1 Conjugation System in Response to Disturbance of the Endoplasmic Reticulum Homeostasis and Inhibition of Vesicle Trafficking
Yinghua Zhang, Mingsheng Zhang, Jianchun Wu, Guohua Lei, Honglin Li
PLoS One. 2012; 7(11): e48587. Published online 2012 Nov 13. doi: 10.1371/journal.pone.0048587
PMCID:
PMC3496721
AbstractArticlePDF–963K
12.
Neddylation mediates ventricular chamber maturation through repression of Hippo signaling
Jianqiu Zou, Wenxia Ma, Jie Li, Rodney Littlejohn, Hongyi Zhou, Il-man Kim, David J. R. Fulton, Weiqin Chen, Neal L. Weintraub, Jiliang Zhou, Huabo Su
Proc Natl Acad Sci U S A. 2018 Apr 24; 115(17): E4101–E4110. Published online 2018 Apr 9. doi: 10.1073/pnas.1719309115
PMCID:
PMC5924905
AbstractArticlePDF–2.3M
13.
The sperm associated antigen 6 interactome and its role in spermatogenesis
Yunhao Liu, Ling Zhang, Wei Li, Yuhong Li, Junpin Liu, Shiyang Zhang, Guanglun Pin, Shizhen Song, Pierre F Ray, Christophe Arnoult, Chunghee Cho, Balbina Garcia-Reyes, Uwe Knippschild, Jerome F. Strauss, III, Zhibing Zhang
Reproduction. Author manuscript; available in PMC 2020 Jul 18.
Published in final edited form as: Reproduction. 2019 Aug; 158(2): 181–197. doi: 10.1530/REP-18-0522
PMCID:
PMC7368494
AbstractArticlePDF–1.8M
14.
Identification of transcripts with enriched expression in the developing and adult pancreas
Brad G Hoffman, Bogard Zavaglia, Joy Witzsche, Teresa Ruiz de Algara, Mike Beach, Pamela A Hoodless, Steven JM Jones, Marco A Marra, Cheryl D Helgason
Genome Biol. 2008; 9(6): R99. Published online 2008 Jun 14. doi: 10.1186/gb-2008-9-6-r99
PMCID:
PMC2481431
AbstractArticlePDF–2.2M
15.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
16.
Wnk1 kinase deficiency lowers blood pressure in mice: A gene-trap screen to identify potential targets for therapeutic intervention
Brian P. Zambrowicz, Alejandro Abuin, Ramiro Ramirez-Solis, Lizabeth J. Richter, James Piggott, Hector BeltrandelRio, Eric C. Buxton, Joel Edwards, Rick A. Finch, Carl J. Friddle, Anupma Gupta, Gwenn Hansen, Yi Hu, Wenhu Huang, Crystal Jaing, Billie Wayne Key, Jr., Peter Kipp, Buckley Kohlhauff, Zhi-Qing Ma, Diane Markesich, Robert Payne, David G. Potter, Ny Qian, Joseph Shaw, Jeff Schrick, Zheng-Zheng Shi, Mary Jean Sparks, Isaac Van Sligtenhorst, Peter Vogel, Wade Walke, Nianhua Xu, Qichao Zhu, Christophe Person, Arthur T. Sands
Proc Natl Acad Sci U S A. 2003 Nov 25; 100(24): 14109–14114. Published online 2003 Nov 10. doi: 10.1073/pnas.2336103100
Correction in:
Proc Natl Acad Sci U S A. 2004 Mar 23; 101(12): 4332.
PMCID:
PMC283554
AbstractArticlePDF–481K
17.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
18.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
19.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
20.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M

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