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Items: 1 to 20 of 43

1.
SPLICING FACTOR1 Is Important in Chloroplast Development under Cold Stress
Yajuan Zhu, Wenjuan Wu, Wei Shao, Jingli Chen, Xiaoning Shi, Xiaoyu Ma, Yong-Zhen Xu, Weihua Huang, Jirong Huang
Plant Physiol. 2020 Oct; 184(2): 973–987. Published online 2020 Jul 30. doi: 10.1104/pp.20.00706
PMCID:
PMC7536683
AbstractArticlePDF–2.1M
2.
Transposition of two amino acids changes a promiscuous RNA binding protein into a sequence-specific RNA binding protein
Stephen M. Garrey, Danielle M. Cass, Anica M. Wandler, Mary S. Scanlan, J. Andrew Berglund
RNA. 2008 Jan; 14(1): 78–88. doi: 10.1261/rna.633808
PMCID:
PMC2151040
AbstractArticlePDF–1.3M
3.
The KH domain of the branchpoint sequence binding protein determines specificity for the pre-mRNA branchpoint sequence.
J A Berglund, M L Fleming, M Rosbash
RNA. 1998 Aug; 4(8): 998–1006. doi: 10.1017/s1355838298980499
PMCID:
PMC1369676
SummaryPDF–461K
4.
Transient interaction of BBP/ScSF1 and Mud2 with the splicing machinery affects the kinetics of spliceosome assembly.
B Rutz, B Séraphin
RNA. 1999 Jun; 5(6): 819–831. doi: 10.1017/s1355838299982286
PMCID:
PMC1369807
SummaryPDF–619K
5.
A dual role for BBP/ScSF1 in nuclear pre-mRNA retention and splicing
Berthold Rutz, Bertrand Séraphin
EMBO J. 2000 Apr 17; 19(8): 1873–1886. doi: 10.1093/emboj/19.8.1873
PMCID:
PMC302019
AbstractArticlePDF–796K
6.
Structural basis for recognition of intron branchpoint RNA by yeast Msl5 and selective effects of interfacial mutations on splicing of yeast pre-mRNAs
Agata Jacewicz, Lidia Chico, Paul Smith, Beate Schwer, Stewart Shuman
RNA. 2015 Mar; 21(3): 401–414. doi: 10.1261/rna.048942.114
PMCID:
PMC4338336
AbstractArticlePDF–1.4M
7.
Domain Requirements and Genetic Interactions of the Mud1 Subunit of the Saccharomyces cerevisiae U1 snRNP
Radhika Agarwal, Beate Schwer, Stewart Shuman
G3 (Bethesda) 2019 Jan; 9(1): 145–151. Published online 2018 Nov 9. doi: 10.1534/g3.118.200781
PMCID:
PMC6325900
AbstractArticlePDF–1.3M
8.
A BBP–Mud2p heterodimer mediates branchpoint recognition and influences splicing substrate abundance in budding yeast
Qiang Wang, Li Zhang, Bert Lynn, Brian C. Rymond
Nucleic Acids Res. 2008 May; 36(8): 2787–2798. Published online 2008 Mar 29. doi: 10.1093/nar/gkn144
PMCID:
PMC2377449
AbstractArticlePDF–428K
9.
Evidence for complex dynamics during U2 snRNP selection of the intron branchpoint
Ching-Yang Kao, En-Cih Cao, Hsu Lei Wai, Soo-Chen Cheng
Nucleic Acids Res. 2021 Sep 27; 49(17): 9965–9977. Published online 2021 Aug 13. doi: 10.1093/nar/gkab695
PMCID:
PMC8464032
AbstractArticlePDF–4.3M
10.
Mer1p is a modular splicing factor whose function depends on the conserved U2 snRNP protein Snu17p
Marc Spingola, Javier Armisen, Manuel Ares, Jr
Nucleic Acids Res. 2004; 32(3): 1242–1250. Published online 2004 Feb 18. doi: 10.1093/nar/gkh281
Correction in:
Nucleic Acids Res. 2006; 34(5): 1667.
PMCID:
PMC373413
AbstractArticlePDF–228K
11.
Structure-function analysis of the 5′ end of yeast U1 snRNA highlights genetic interactions with the Msl5•Mud2 branchpoint-binding complex and other spliceosome assembly factors
Beate Schwer, Jonathan Chang, Stewart Shuman
Nucleic Acids Res. 2013 Aug; 41(15): 7485–7500. Published online 2013 Jun 10. doi: 10.1093/nar/gkt490
PMCID:
PMC3753624
AbstractArticlePDF–7.4M
12.
Genetic interactions of hypomorphic mutations in the m7G cap-binding pocket of yeast nuclear cap binding complex: An essential role for Cbc2 in meiosis via splicing of MER3 pre-mRNA
Zhicheng R. Qiu, Lidia Chico, Jonathan Chang, Stewart Shuman, Beate Schwer
RNA. 2012 Nov; 18(11): 1996–2011. doi: 10.1261/rna.033746.112
PMCID:
PMC3479390
AbstractArticlePDF–1.0M
13.
A unified mechanism for intron and exon definition and back-splicing
Xueni Li, Shiheng Liu, Lingdi Zhang, Aaron Issaian, Ryan C. Hill, Sara Espinosa, Shasha Shi, Yanxiang Cui, Kalli Kappel, Rhiju Das, Kirk C. Hansen, Z. Hong Zhou, Rui Zhao
Nature. Author manuscript; available in PMC 2020 Mar 4.
Published in final edited form as: Nature. 2019 Sep; 573(7774): 375–380. Published online 2019 Sep 4. doi: 10.1038/s41586-019-1523-6
PMCID:
PMC6939996
AbstractArticlePDF–4.8M
14.
Cotranscriptional recruitment of yeast TRAMP complex to intronic sequences promotes optimal pre-mRNA splicing
Ka-Yiu Edwin Kong, Hei-Man Vincent Tang, Kewu Pan, Zhe Huang, Tsz-Hang Jimmy Lee, Alan G. Hinnebusch, Dong-Yan Jin, Chi-Ming Wong
Nucleic Acids Res. 2014 Jan 1; 42(1): 643–660. Published online 2013 Oct 3. doi: 10.1093/nar/gkt888
PMCID:
PMC3874199
AbstractArticlePDF–13M
15.
Mud2 functions in transcription by recruiting the Prp19 and TREX complexes to transcribed genes
Rashmi Minocha, Varvara Popova, Daria Kopytova, Danny Misiak, Stefan Hüttelmaier, Sofia Georgieva, Katja Sträßer
Nucleic Acids Res. 2018 Oct 12; 46(18): 9749–9763. Published online 2018 Jul 24. doi: 10.1093/nar/gky640
Correction in:
Nucleic Acids Res. 2018 Oct 12; 46(18): 9890.
PMCID:
PMC6182176
AbstractArticlePDF–1.0M
16.
Structural insights into how Prp5 proofreads the pre-mRNA branch site
Zhenwei Zhang, Norbert Rigo, Olexandr Dybkov, Jean-Baptiste Fourmann, Cindy L. Will, Vinay Kumar, Henning Urlaub, Holger Stark, Reinhard Lührmann
Nature. 2021; 596(7871): 296–300. Published online 2021 Aug 4. doi: 10.1038/s41586-021-03789-5
PMCID:
PMC8357632
AbstractArticlePDF–16M
17.
Structure–function analysis and genetic interactions of the yeast branchpoint binding protein Msl5
Jonathan Chang, Beate Schwer, Stewart Shuman
Nucleic Acids Res. 2012 May; 40(10): 4539–4552. Published online 2012 Jan 28. doi: 10.1093/nar/gks049
PMCID:
PMC3378887
AbstractArticlePDF–6.7M
18.
Protein characterization of Saccharomyces cerevisiae RNA polymerase II after in vivo cross-linking
Daniel F. Tardiff, Katharine C. Abruzzi, Michael Rosbash
Proc Natl Acad Sci U S A. 2007 Dec 11; 104(50): 19948–19953. Published online 2007 Dec 5. doi: 10.1073/pnas.0710179104
PMCID:
PMC2148403
AbstractArticlePDF–356K
19.
Proteasome Nuclear Activity Affects Chromosome Stability by Controlling the Turnover of Mms22, a Protein Important for DNA Repair
Shay Ben-Aroya, Neta Agmon, Karen Yuen, Teresa Kwok, Kirk McManus, Martin Kupiec, Philip Hieter
PLoS Genet. 2010 Feb; 6(2): e1000852. Published online 2010 Feb 19. doi: 10.1371/journal.pgen.1000852
PMCID:
PMC2824753
AbstractArticlePDF–999K
20.
The nuclear localization of SWI/SNF proteins is subjected to oxygen regulation
Ranita Ghosh Dastidar, Jagmohan Hooda, Ajit Shah, Thai M Cao, Robert Michael Henke, Li Zhang
Cell Biosci. 2012; 2: 30. Published online 2012 Aug 29. doi: 10.1186/2045-3701-2-30
PMCID:
PMC3489556
AbstractArticlePDF–2.4M

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