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Items: 1 to 20 of 35

1.
Crystal structure, mutational analysis and RNA-dependent ATPase activity of the yeast DEAD-box pre-mRNA splicing factor Prp28
Agata Jacewicz, Beate Schwer, Paul Smith, Stewart Shuman
Nucleic Acids Res. 2014 Nov 10; 42(20): 12885–12898. Published online 2014 Oct 10. doi: 10.1093/nar/gku930
PMCID:
PMC4227776
AbstractArticlePDF–762K
2.
Effects of the U1C L13 mutation and temperature regulation of yeast commitment complex formation
Hansen Du, Daniel F. Tardiff, Melissa J. Moore, Michael Rosbash
Proc Natl Acad Sci U S A. 2004 Oct 12; 101(41): 14841–14846. Published online 2004 Oct 1. doi: 10.1073/pnas.0406319101
PMCID:
PMC522046
AbstractArticlePDF–397K
3.
PRP28, a 'DEAD-box' protein, is required for the first step of mRNA splicing in vitro.
E J Strauss, C Guthrie
Nucleic Acids Res. 1994 Aug 11; 22(15): 3187–3193. doi: 10.1093/nar/22.15.3187
PMCID:
PMC310295
SummaryPage BrowsePDF–1.7M
4.
Genetic interactions of conserved regions in the DEAD-box protein Prp28p.
T H Chang, L J Latus, Z Liu, J M Abbott
Nucleic Acids Res. 1997 Dec 15; 25(24): 5033–5040. doi: 10.1093/nar/25.24.5033
PMCID:
PMC147153
SummaryPDF–186K
5.
Splicing proofreading at 5′ splice sites by ATPase Prp28p
Fei Yang, Xiu-Ye Wang, Zhi-Min Zhang, Jia Pu, Yu-Jie Fan, Jiahai Zhou, Charles C. Query, Yong-Zhen Xu
Nucleic Acids Res. 2013 Apr; 41(8): 4660–4670. Published online 2013 Mar 5. doi: 10.1093/nar/gkt149
PMCID:
PMC3632134
AbstractArticlePDF–2.3M
6.
Distinct domains of splicing factor Prp8 mediate different aspects of spliceosome activation
Andreas N. Kuhn, Elizabeth M. Reichl, David A. Brow
Proc Natl Acad Sci U S A. 2002 Jul 9; 99(14): 9145–9149. Published online 2002 Jun 26. doi: 10.1073/pnas.102304299
PMCID:
PMC123108
AbstractArticlePDF–294K
7.
Activation of Prp28 ATPase by phosphorylated Npl3 at a critical step of spliceosome remodeling
Fu-Lung Yeh, Shang-Lin Chang, Golam Rizvee Ahmed, Hsin-I Liu, Luh Tung, Chung-Shu Yeh, Leah Stands Lanier, Corina Maeder, Che-Min Lin, Shu-Chun Tsai, Wan-Yi Hsiao, Wei-Hau Chang, Tien-Hsien Chang
Nat Commun. 2021; 12: 3082. Published online 2021 May 25. doi: 10.1038/s41467-021-23459-4
PMCID:
PMC8149812
AbstractArticlePDF–2.5M
8.
A Targeted Bypass Screen Identifies Ynl187p, Prp42p, Snu71p, and Cbp80p for Stable U1 snRNP/Pre-mRNA Interaction
Rosemary Hage, Luh Tung, Hansen Du, Leah Stands, Michael Rosbash, Tien-Hsien Chang
Mol Cell Biol. 2009 Jul; 29(14): 3941–3952. Published online 2009 May 18. doi: 10.1128/MCB.00384-09
PMCID:
PMC2704744
AbstractArticlePDF–1.4M
9.
The human U5-200kD DEXH-box protein unwinds U4/U6 RNA duplices in vitro
Bernhard Laggerbauer, Tilmann Achsel, Reinhard Lührmann
Proc Natl Acad Sci U S A. 1998 Apr 14; 95(8): 4188–4192. doi: 10.1073/pnas.95.8.4188
PMCID:
PMC22463
AbstractArticlePDF–288K
10.
Structure-function analysis of the Yhc1 subunit of yeast U1 snRNP and genetic interactions of Yhc1 with Mud2, Nam8, Mud1, Tgs1, U1 snRNA, SmD3 and Prp28
Beate Schwer, Stewart Shuman
Nucleic Acids Res. 2014 Apr; 42(7): 4697–4711. Published online 2014 Jan 31. doi: 10.1093/nar/gku097
PMCID:
PMC3985668
AbstractArticlePDF–10M
11.
Structure–function analysis and genetic interactions of the Luc7 subunit of the Saccharomyces cerevisiae U1 snRNP
Radhika Agarwal, Beate Schwer, Stewart Shuman
RNA. 2016 Sep; 22(9): 1302–1310. doi: 10.1261/rna.056911.116
PMCID:
PMC4986886
AbstractArticlePDF–1.0M
12.
An unanticipated early function of DEAD-box ATPase Prp28 during commitment to splicing is modulated by U5 snRNP protein Prp8
Argenta M. Price, Janina Görnemann, Christine Guthrie, David A. Brow
RNA. 2014 Jan; 20(1): 46–60. doi: 10.1261/rna.041970.113
PMCID:
PMC3866644
AbstractArticlePDF–536K
13.
Structure–function analysis and genetic interactions of the Yhc1, SmD3, SmB, and Snp1 subunits of yeast U1 snRNP and genetic interactions of SmD3 with U2 snRNP subunit Lea1
Beate Schwer, Stewart Shuman
RNA. 2015 Jun; 21(6): 1173–1186. doi: 10.1261/rna.050583.115
PMCID:
PMC4436669
AbstractArticlePDF–885K
14.
Structure-function analysis of the 5′ end of yeast U1 snRNA highlights genetic interactions with the Msl5•Mud2 branchpoint-binding complex and other spliceosome assembly factors
Beate Schwer, Jonathan Chang, Stewart Shuman
Nucleic Acids Res. 2013 Aug; 41(15): 7485–7500. Published online 2013 Jun 10. doi: 10.1093/nar/gkt490
PMCID:
PMC3753624
AbstractArticlePDF–7.4M
15.
Genetic Analysis Reveals a Role for the C Terminus of the Saccharomyces cerevisiae GTPase Snu114 During Spliceosome Activation
Tamara J. Brenner, Christine Guthrie
Genetics. 2005 Jul; 170(3): 1063–1080. doi: 10.1534/genetics.105.042044
PMCID:
PMC1451163
AbstractArticlePDF–983K
16.
Biochemical and genetic analyses of the U5, U6, and U4/U6 x U5 small nuclear ribonucleoproteins from Saccharomyces cerevisiae.
S W Stevens, I Barta, H Y Ge, R E Moore, M K Young, T D Lee, J Abelson
RNA. 2001 Nov; 7(11): 1543–1553.
PMCID:
PMC1370197
SummaryPDF–755K
17.
Phylogenetic Comparison and Splicing Analysis of the U1 snRNP-specific Protein U1C in Eukaryotes
Kai-Lu Zhang, Jian-Li Zhou, Jing-Fang Yang, Yu-Zhen Zhao, Debatosh Das, Ge-Fei Hao, Caie Wu, Jianhua Zhang, Fu-Yuan Zhu, Mo-Xian Chen, Shao-Ming Zhou
Front Mol Biosci. 2021; 8: 696319. Published online 2021 Sep 9. doi: 10.3389/fmolb.2021.696319
PMCID:
PMC8458698
AbstractArticlePDF–4.4M
18.
Systematic analysis of bypass suppression of essential genes
Jolanda van Leeuwen, Carles Pons, Guihong Tan, Zi Yang Wang, Jing Hou, Jochen Weile, Marinella Gebbia, Wendy Liang, Ermira Shuteriqi, Zhijian Li, Maykel Lopes, Matej Ušaj, Andreia Dos Santos Lopes, Natascha van Lieshout, Chad L Myers, Frederick P Roth, Patrick Aloy, Brenda J Andrews, Charles Boone
Mol Syst Biol. 2020 Sep; 16(9): e9828. Published online 2020 Sep 17. doi: 10.15252/msb.20209828
PMCID:
PMC7507402
AbstractArticlePDF–1.9M
19.
Whi3, a Developmental Regulator of Budding Yeast, Binds a Large Set of mRNAs Functionally Related to the Endoplasmic Reticulum
Neus Colomina, Francisco Ferrezuelo, Hongyin Wang, Martí Aldea, Eloi Garí
J Biol Chem. 2008 Oct 17; 283(42): 28670–28679. doi: 10.1074/jbc.M804604200
PMCID:
PMC2661415
AbstractArticlePDF–680K
20.
The histone chaperone Spt6 is required for normal recruitment of the capping enzyme Abd1 to transcribed regions
Rajaraman Gopalakrishnan, Fred Winston
J Biol Chem. 2021 Oct; 297(4): 101205. Published online 2021 Sep 17. doi: 10.1016/j.jbc.2021.101205
PMCID:
PMC8511950
AbstractArticlePDF–3.1M

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