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Items: 1 to 20 of 283

1.
Xrn1 influence on gene transcription results from the combination of general effects on elongating RNA pol II and gene-specific chromatin configuration
Victoria Begley, Antonio Jordán-Pla, Xenia Peñate, Ana I. Garrido-Godino, Drice Challal, Abel Cuevas-Bermúdez, Adrià Mitjavila, Mara Barucco, Gabriel Gutiérrez, Abhyudai Singh, Paula Alepuz, Francisco Navarro, Domenico Libri, José E. Pérez-Ortín, Sebastián Chávez
RNA Biol. 2021; 18(9): 1310–1323. Published online 2020 Dec 1. doi: 10.1080/15476286.2020.1845504
PMCID:
PMC8354610
AbstractArticlePDF–5.1M
2.
Biochemical Characterization of Yeast Xrn1
Conner J. Langeberg, William R. W. Welch, John V. McGuire, Alison Ashby, Alexander D. Jackson, Erich G. Chapman
Biochemistry. Author manuscript; available in PMC 2021 Apr 21.
Published in final edited form as: Biochemistry. 2020 Apr 21; 59(15): 1493–1507. Published online 2020 Apr 13. doi: 10.1021/acs.biochem.9b01035
PMCID:
PMC7780157
AbstractArticlePDF–2.5M
3.
Beet Necrotic Yellow Vein Virus Noncoding RNA Production Depends on a 5′→3′ Xrn Exoribonuclease Activity
Alyssa Flobinus, Nicolas Chevigny, Phillida A. Charley, Tanja Seissler, Elodie Klein, Claudine Bleykasten-Grosshans, Claudio Ratti, Salah Bouzoubaa, Jeffrey Wilusz, David Gilmer
Viruses. 2018 Mar; 10(3): 137. Published online 2018 Mar 19. doi: 10.3390/v10030137
PMCID:
PMC5869530
AbstractArticlePDF–9.4M
4.
Multiplexed gene control reveals rapid mRNA turnover
Antoine Baudrimont, Sylvia Voegeli, Eduardo Calero Viloria, Fabian Stritt, Marine Lenon, Takeo Wada, Vincent Jaquet, Attila Becskei
Sci Adv. 2017 Jul; 3(7): e1700006. Published online 2017 Jul 12. doi: 10.1126/sciadv.1700006
PMCID:
PMC5507631
AbstractArticlePDF–1.1M
5.
Cytoplasmic 5′-3′ exonuclease Xrn1p is also a genome-wide transcription factor in yeast
Daniel A. Medina, Antonio Jordán-Pla, Gonzalo Millán-Zambrano, Sebastián Chávez, Mordechai Choder, José E. Pérez-Ortín
Front Genet. 2014; 5: 1. Prepublished online 2013 Dec 10. Published online 2014 Feb 6. doi: 10.3389/fgene.2014.00001
PMCID:
PMC3915102
AbstractArticlePDF–1.6M
6.
20S RNA Narnavirus Defies the Antiviral Activity of SKI1/XRN1 in Saccharomyces cerevisiae
Rosa Esteban, Lorena Vega, Tsutomu Fujimura
J Biol Chem. 2008 Sep 19; 283(38): 25812–25820. doi: 10.1074/jbc.M804400200
PMCID:
PMC3258869
AbstractArticlePDF–500K
7.
Yeast Double-stranded RNA Virus L-A Deliberately Synthesizes RNA Transcripts with 5′-Diphosphate
Tsutomu Fujimura, Rosa Esteban
J Biol Chem. 2010 Jul 23; 285(30): 22911–22918. Published online 2010 May 28. doi: 10.1074/jbc.M110.138982
PMCID:
PMC2906283
AbstractArticlePDF–2.4M
8.
Real-time fluorescence detection of exoribonucleases
Flore Sinturel, Olivier Pellegrini, Song Xiang, Liang Tong, Ciarán Condon, Lionel Bénard
RNA. 2009 Nov; 15(11): 2057–2062. doi: 10.1261/rna.1670909
PMCID:
PMC2764478
AbstractArticlePDF–612K
9.
Suppression of Viral RNA Recombination by a Host Exoribonuclease
Chi-Ping Cheng, Elena Serviene, Peter D. Nagy
J Virol. 2006 Mar; 80(6): 2631–2640. doi: 10.1128/JVI.80.6.2631-2640.2006
PMCID:
PMC1395426
AbstractArticlePDF–451K
10.
Processing bodies require RNA for assembly and contain nontranslating mRNAs
DANIELA TEIXEIRA, UJWAL SHETH, MARCO A. VALENCIA-SANCHEZ, MURIEL BRENGUES, ROY PARKER
RNA. 2005 Apr; 11(4): 371–382. doi: 10.1261/rna.7258505
PMCID:
PMC1370727
AbstractArticlePDF–712K
11.
Yeast cells lacking 5'-->3' exoribonuclease 1 contain mRNA species that are poly(A) deficient and partially lack the 5' cap structure.
C L Hsu, A Stevens
Mol Cell Biol. 1993 Aug; 13(8): 4826–4835. doi: 10.1128/mcb.13.8.4826
PMCID:
PMC360109
SummaryPage BrowsePDF–2.2M
12.
Regulation and intracellular localization of Saccharomyces cerevisiae strand exchange protein 1 (Sep1/Xrn1/Kem1), a multifunctional exonuclease.
W D Heyer, A W Johnson, U Reinhart, R D Kolodner
Mol Cell Biol. 1995 May; 15(5): 2728–2736. doi: 10.1128/mcb.15.5.2728
PMCID:
PMC230503
SummaryPDF–529K
13.
Mutational analysis of exoribonuclease I from Saccharomyces cerevisiae.
A M Page, K Davis, C Molineux, R D Kolodner, A W Johnson
Nucleic Acids Res. 1998 Aug 15; 26(16): 3707–3716. doi: 10.1093/nar/26.16.3707
PMCID:
PMC147754
SummaryPDF–448K
14.
RNA Polymerase I-Promoted HIS4 Expression Yields Uncapped, Polyadenylated mRNA That Is Unstable and Inefficiently Translated in Saccharomyces cerevisiae
Hsiu-Jung Lo, Han-Kuei Huang, Thomas F. Donahue
Mol Cell Biol. 1998 Feb; 18(2): 665–675. doi: 10.1128/mcb.18.2.665
PMCID:
PMC108777
AbstractArticlePDF–1.3M
15.
Active-Site Mutations in the Xrn1p Exoribonuclease of Saccharomyces cerevisiae Reveal a Specific Role in Meiosis
Jachen A. Solinger, Donatella Pascolini, Wolf-Dietrich Heyer
Mol Cell Biol. 1999 Sep; 19(9): 5930–5942. doi: 10.1128/mcb.19.9.5930
PMCID:
PMC84450
AbstractArticlePDF–1.9M
16.
Identification and characterization of a nuclease activity specific for G4 tetrastranded DNA.
Z Liu, J D Frantz, W Gilbert, B K Tye
Proc Natl Acad Sci U S A. 1993 Apr 15; 90(8): 3157–3161. doi: 10.1073/pnas.90.8.3157
PMCID:
PMC46258
SummaryPage BrowsePDF–1.5M
17.
Gene disruption of a G4-DNA-dependent nuclease in yeast leads to cellular senescence and telomere shortening.
Z Liu, A Lee, W Gilbert
Proc Natl Acad Sci U S A. 1995 Jun 20; 92(13): 6002–6006. doi: 10.1073/pnas.92.13.6002
PMCID:
PMC41630
SummaryPage BrowsePDF–1.4M
18.
Degradation of CYC1 mRNA in the yeast Saccharomyces cerevisiae does not require translation.
D F Yun, F Sherman
Proc Natl Acad Sci U S A. 1996 Aug 20; 93(17): 8895–8900. doi: 10.1073/pnas.93.17.8895
PMCID:
PMC38565
SummaryPage BrowsePDF–1.6M
19.
Ceg1 depletion reveals mechanisms governing degradation of non-capped RNAs in Saccharomyces cerevisiae
Onofrio Zanin, Matthew Eastham, Kinga Winczura, Mark Ashe, Rocio T. Martinez-Nunez, Daniel Hebenstreit, Pawel Grzechnik
Commun Biol. 2023; 6: 1112. Published online 2023 Nov 2. doi: 10.1038/s42003-023-05495-6
PMCID:
PMC10622555
AbstractArticlePDF–2.2M
20.
Yeast Dxo1 is required for 25S rRNA maturation and acts as a transcriptome-wide distributive exonuclease
Jennifer E. Hurtig, Ambro van Hoof
RNA. 2022 May; 28(5): 657–667. doi: 10.1261/rna.078952.121
PMCID:
PMC9014881
AbstractArticlePDF–2.5M

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