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Select item 3380741.

Global Phenotypic Analysis and Transcriptional Profiling Defines the Weak Acid Stress Response Regulon in Saccharomyces cerevisiae

Christoph Schüller, Yasmine M. Mamnun, Mehdi Mollapour, Gerd Krapf, Michael Schuster, Bettina E. Bauer, Peter W. Piper, Karl Kuchler

Mol Biol Cell. 2004 Feb; 15(2): 706–720. doi: 10.1091/mbc.E03-05-0322

PMCID:: PMC338074

Abstract Article PDF–531K

Select item 38943622.

Cuz1/Ynl155w, a Zinc-dependent Ubiquitin-binding Protein, Protects Cells from Metalloid-induced Proteotoxicity

John Hanna, David Waterman, Marta Isasa, Suzanne Elsasser, Yuan Shi, Steven Gygi, Daniel Finley

J Biol Chem. 2014 Jan 17; 289(3): 1876–1885. Published online 2013 Dec 2. doi: 10.1074/jbc.M113.534032

PMCID:: PMC3894362

Abstract Article PDF–3.4M

Select item 31594523.

Unraveling networks of co-regulated genes on the sole basis of genome sequences

Sylvain Brohée, Rekin’s Janky, Fadi Abdel-Sater, Gilles Vanderstocken, Bruno André, Jacques van Helden

Nucleic Acids Res. 2011 Aug; 39(15): 6340–6358. Published online 2011 May 13. doi: 10.1093/nar/gkr264

PMCID:: PMC3159452

Abstract Article PDF–21M

Select item 49381954.

Tmc1 Is a Dynamically Regulated Effector of the Rpn4 Proteotoxic Stress Response

Angel Guerra-Moreno, John Hanna

J Biol Chem. 2016 Jul 8; 291(28): 14788–14795. Published online 2016 May 12. doi: 10.1074/jbc.M116.726398

PMCID:: PMC4938195

Abstract Article PDF–2.8M

Select item 38371145.

A Conserved Protein with AN1 Zinc Finger and Ubiquitin-like Domains Modulates Cdc48 (p97) Function in the Ubiquitin-Proteasome Pathway

Bebiana Sá-Moura, Minoru Funakoshi, Robert J. Tomko, Jr., R. Jürgen Dohmen, Zhiping Wu, Junmin Peng, Mark Hochstrasser

J Biol Chem. 2013 Nov 22; 288(47): 33682–33696. Published online 2013 Oct 11. doi: 10.1074/jbc.M113.521088

PMCID:: PMC3837114

Abstract Article PDF–4.9M

Select item 29804766.

Identification of Saccharomyces cerevisiae Spindle Pole Body Remodeling Factors

Kristen B. Greenland, Huiming Ding, Michael Costanzo, Charles Boone, Trisha N. Davis

PLoS One. 2010; 5(11): e15426. Published online 2010 Nov 12. doi: 10.1371/journal.pone.0015426

PMCID:: PMC2980476

Abstract Article PDF–2.1M

Select item 38739817.

Whi3, an S. cerevisiae RNA-Binding Protein, Is a Component of Stress Granules That Regulates Levels of Its Target mRNAs

Kristen J. Holmes, Daniel M. Klass, Evan L. Guiney, Martha S. Cyert

PLoS One. 2013; 8(12): e84060. Published online 2013 Dec 27. doi: 10.1371/journal.pone.0084060

PMCID:: PMC3873981

Abstract Article PDF–11M

Select item 71407078.

Heme, A Metabolic Sensor, Directly Regulates the Activity of the KDM4 Histone Demethylase Family and Their Interactions with Partner Proteins

Purna Chaitanya Konduri, Tianyuan Wang, Narges Salamat, Li Zhang

Cells. 2020 Mar; 9(3): 773. Published online 2020 Mar 22. doi: 10.3390/cells9030773

PMCID:: PMC7140707

Abstract Article PDF–3.2M

Select item 67117069.

A nuclear role for the DEAD-box protein Dbp5 in tRNA export

Azra Lari, Arvind Arul Nambi Rajan, Rima Sandhu, Taylor Reiter, Rachel Montpetit, Barry P Young, Chris JR Loewen, Ben Montpetit

eLife. 2019; 8: e48410. Published online 2019 Aug 27. doi: 10.7554/eLife.48410

Correction in:: eLife. 2020; 9: e63264.

PMCID:: PMC6711706

Abstract Article PDF–3.8M

Select item 390688910.

A yeast phenomic model for the gene interaction network modulating CFTR-ΔF508 protein biogenesis

Raymond J Louie, Jingyu Guo, John W Rodgers, Rick White, Najaf A Shah, Silvere Pagant, Peter Kim, Michael Livstone, Kara Dolinski, Brett A McKinney, Jeong Hong, Eric J Sorscher, Jennifer Bryan, Elizabeth A Miller, John L Hartman, IV

Genome Med. 2012; 4(12): 103. Published online 2012 Dec 27. doi: 10.1186/gm404

PMCID:: PMC3906889

Abstract Article PDF–2.5M

Select item 295043611.

Sulfate Assimilation Mediates Tellurite Reduction and Toxicity in Saccharomyces cerevisiae

Lars-Göran Ottosson, Katarina Logg, Sebastian Ibstedt, Per Sunnerhagen, Mikael Käll, Anders Blomberg, Jonas Warringer

Eukaryot Cell. 2010 Oct; 9(10): 1635–1647. doi: 10.1128/EC.00078-10

PMCID:: PMC2950436

Abstract Article PDF–3.2M

Select item 266141512.

Whi3, a Developmental Regulator of Budding Yeast, Binds a Large Set of mRNAs Functionally Related to the Endoplasmic Reticulum

Neus Colomina, Francisco Ferrezuelo, Hongyin Wang, Martí Aldea, Eloi Garí

J Biol Chem. 2008 Oct 17; 283(42): 28670–28679. doi: 10.1074/jbc.M804604200

PMCID:: PMC2661415

Abstract Article PDF–680K

Select item 396249013.

The Yeast Ess1 Prolyl Isomerase Controls Swi6 and Whi5 Nuclear Localization

David Atencio, Cassandra Barnes, Thomas M. Duncan, Ian M. Willis, Steven D. Hanes

G3 (Bethesda) 2014 Mar; 4(3): 523–537. Published online 2014 Jan 27. doi: 10.1534/g3.113.008763

PMCID:: PMC3962490

Abstract Article PDF–2.3M

Select item 504769314.

Systematic identification of genes involved in metabolic acid stress resistance in yeast and their potential as cancer targets

John J. Shin, Qurratulain Aftab, Pamela Austin, Jennifer A. McQueen, Tak Poon, Shu Chen Li, Barry P. Young, Calvin D. Roskelley, Christopher J. R. Loewen

Dis Model Mech. 2016 Sep 1; 9(9): 1039–1049. doi: 10.1242/dmm.023374

PMCID:: PMC5047693

Abstract Article

Select item 629136615.

The cellular economy of the Saccharomyces cerevisiae zinc proteome

Yirong Wang, Erin Weisenhorn, Colin MacDiarmid, Claudia Andreini, Michael Bucci, Janet Taggart, Lucia Banci, Jason Russell, Joshua J. Coon, David J. Eide

Metallomics. Author manuscript; available in PMC 2019 Dec 12.

Published in final edited form as: Metallomics. 2018 Dec 12; 10(12): 1755–1776. doi: 10.1039/c8mt00269j

PMCID:: PMC6291366

Abstract Article PDF–3.0M

Select item 343423616.

Dissecting DNA damage response pathways by analyzing protein localization and abundance changes during DNA replication stress

Johnny M. Tkach, Askar Yimit, Anna Y. Lee, Michael Riffle, Michael Costanzo, Daniel Jaschob, Jason A. Hendry, Jiongwen Ou, Jason Moffat, Charles Boone, Trisha N. Davis, Corey Nislow, Grant W. Brown

Nat Cell Biol. Author manuscript; available in PMC 2013 Mar 1.

Published in final edited form as: Nat Cell Biol. 2012 Sep; 14(9): 966–976. Published online 2012 Jul 29. doi: 10.1038/ncb2549

PMCID:: PMC3434236

Abstract Article PDF–1.5M

Select item 405396417.

Pervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiae

Mallory A Freeberg, Ting Han, James J Moresco, Andy Kong, Yu-Cheng Yang, Zhi John Lu, John R Yates, John K Kim

Genome Biol. 2013; 14(2): R13. Published online 2013 Feb 14. doi: 10.1186/gb-2013-14-2-r13

PMCID:: PMC4053964

Abstract Article PDF–1.7M

Select item 461603918.

Integrated multi-omics analyses reveal the pleiotropic nature of the control of gene expression by Puf3p

Christopher J. Kershaw, Joseph L. Costello, David Talavera, William Rowe, Lydia M. Castelli, Paul F. G. Sims, Christopher M. Grant, Mark P. Ashe, Simon J. Hubbard, Graham D. Pavitt

Sci Rep. 2015; 5: 15518. Published online 2015 Oct 23. doi: 10.1038/srep15518