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Items: 1 to 20 of 97

1.
Exon sequences at the splice junctions affect splicing fidelity and alternative splicing
Luciana B. Crotti, David S. Horowitz
Proc Natl Acad Sci U S A. 2009 Nov 10; 106(45): 18954–18959. Published online 2009 Oct 23. doi: 10.1073/pnas.0907948106
PMCID:
PMC2776460
AbstractArticlePDF–1.1M
2.
The Lsm2-8 complex determines nuclear localization of the spliceosomal U6 snRNA
Michael P. Spiller, Kum-Loong Boon, Martin A. M. Reijns, Jean D. Beggs
Nucleic Acids Res. 2007 Feb; 35(3): 923–929. Published online 2007 Jan 23. doi: 10.1093/nar/gkl1130
PMCID:
PMC1807951
AbstractArticlePDF–533K
3.
The Zymomonas mobilis regulator hfq contributes to tolerance against multiple lignocellulosic pretreatment inhibitors
Shihui Yang, Dale A Pelletier, Tse-Yuan S Lu, Steven D Brown
BMC Microbiol. 2010; 10: 135. Published online 2010 May 7. doi: 10.1186/1471-2180-10-135
PMCID:
PMC2877685
AbstractArticlePDF–822K
4.
LSm1-7 complexes bind to specific sites in viral RNA genomes and regulate their translation and replication
Rui Pedro Galão, Ashwin Chari, Isabel Alves-Rodrigues, Daniela Lobão, Antonio Mas, Christian Kambach, Utz Fischer, Juana Díez
RNA. 2010 Apr; 16(4): 817–827. doi: 10.1261/rna.1712910
PMCID:
PMC2844628
AbstractArticlePDF–784K
5.
LSM1 over-expression in Saccharomyces cerevisiae depletes U6 snRNA levels
Natalie Luhtala, Roy Parker
Nucleic Acids Res. 2009 Sep; 37(16): 5529–5536. Published online 2009 Jul 13. doi: 10.1093/nar/gkp572
PMCID:
PMC2760792
AbstractArticlePDF–5.9M
6.
Nuclear Pre-mRNA Decapping and 5′ Degradation in Yeast Require the Lsm2-8p Complex
Joanna Kufel, Cecile Bousquet-Antonelli, Jean D. Beggs, David Tollervey
Mol Cell Biol. 2004 Nov; 24(21): 9646–9657. doi: 10.1128/MCB.24.21.9646-9657.2004
PMCID:
PMC522261
AbstractArticlePDF–604K
7.
Identification of transient intermediates during spliceosome activation by single molecule fluorescence microscopy
Xingyang Fu, Harpreet Kaur, Margaret L. Rodgers, Eric J. Montemayor, Samuel E. Butcher, Aaron A. Hoskins
Proc Natl Acad Sci U S A. 2022 Nov 29; 119(48): e2206815119. Published online 2022 Nov 23. doi: 10.1073/pnas.2206815119
PMCID:
PMC9860250
AbstractArticlePDF–4.0M
8.
The Lsm1-7-Pat1 complex promotes viral RNA translation and replication by differential mechanisms
Jennifer Jungfleisch, Ashis Chowdhury, Isabel Alves-Rodrigues, Sundaresan Tharun, Juana Díez
RNA. 2015 Aug; 21(8): 1469–1479. doi: 10.1261/rna.052209.115
PMCID:
PMC4509936
AbstractArticlePDF–379K
9.
Pat1 contributes to the RNA binding activity of the Lsm1-7–Pat1 complex
Ashis Chowdhury, Swathi Kalurupalle, Sundaresan Tharun
RNA. 2014 Sep; 20(9): 1465–1475. doi: 10.1261/rna.045252.114
PMCID:
PMC4138329
AbstractArticlePDF–585K
10.
Crystal structure and biochemical analysis of the heptameric Lsm1-7 complex
Lijun Zhou, Yulin Zhou, Jing Hang, Ruixue Wan, Guifeng Lu, Chuangye Yan, Yigong Shi
Cell Res. 2014 Apr; 24(4): 497–500. Published online 2014 Feb 11. doi: 10.1038/cr.2014.18
PMCID:
PMC3975500
ArticlePDF–1.2M
11.
Lsm2 and Lsm3 bridge the interaction of the Lsm1-7 complex with Pat1 for decapping activation
Donghui Wu, Denise Muhlrad, Matthew W Bowler, Shimin Jiang, Zhou Liu, Roy Parker, Haiwei Song
Cell Res. 2014 Feb; 24(2): 233–246. Published online 2013 Nov 19. doi: 10.1038/cr.2013.152
PMCID:
PMC3915908
AbstractArticlePDF–1.1M
12.
Both Sm-domain and C-terminal extension of Lsm1 are important for the RNA-binding activity of the Lsm1–7–Pat1 complex
Ashis Chowdhury, Kalidindi K. Raju, Swathi Kalurupalle, Sundaresan Tharun
RNA. 2012 May; 18(5): 936–944. doi: 10.1261/rna.029876.111
PMCID:
PMC3334702
AbstractArticlePDF–1.2M
13.
Multiple functional interactions between components of the Lsm2-Lsm8 complex, U6 snRNA, and the yeast La protein.
B K Pannone, S D Kim, D A Noe, S L Wolin
Genetics. 2001 May; 158(1): 187–196. doi: 10.1093/genetics/158.1.187
PMCID:
PMC1461625
SummaryPDF–415K
14.
Structure of yeast U6 snRNPs: Arrangement of Prp24p and the LSm complex as revealed by electron microscopy
Ramazan Karaduman, Prakash Dube, Holger Stark, Patrizia Fabrizio, Berthold Kastner, Reinhard Lührmann
RNA. 2008 Dec; 14(12): 2528–2537. doi: 10.1261/rna.1369808
PMCID:
PMC2590955
AbstractArticlePDF–789K
15.
Requirements for nuclear localization of Lsm2-8p and competition between nuclear and cytoplasmic Lsm complexes
Michael P. Spiller, Martin A. M. Reijns, Jean D. Beggs
J Cell Sci. Author manuscript; available in PMC 2008 Nov 18.
Published in final edited form as: J Cell Sci. 2007 Dec 15; 120(Pt 24): 4310–4320. Published online 2007 Nov 20. doi: 10.1242/jcs.019943
PMCID:
PMC2584364
AbstractArticlePDF–1.2M
16.
The 5' and 3' domains of yeast U6 snRNA: Lsm proteins facilitate binding of Prp24 protein to the U6 telestem region.
Daniel E Ryan, Scott W Stevens, John Abelson
RNA. 2002 Aug; 8(8): 1011–1033. doi: 10.1017/s1355838202026092
PMCID:
PMC1370313
SummaryPDF–498K
17.
An Lsm2–Lsm7 Complex in Saccharomyces cerevisiae Associates with the Small Nucleolar RNA snR5
Cesar F. Fernandez, Barbara K. Pannone, Xinguo Chen, Gabriele Fuchs, Sandra L. Wolin
Mol Biol Cell. 2004 Jun; 15(6): 2842–2852. doi: 10.1091/mbc.E04-02-0116
PMCID:
PMC420107
AbstractArticlePDF–712K
18.
Architecture of the U6 snRNP reveals specific recognition of 3′-end processed U6 snRNA
Eric J. Montemayor, Allison L. Didychuk, Allyson D. Yake, Gurnimrat K. Sidhu, David A. Brow, Samuel E. Butcher
Nat Commun. 2018; 9: 1749. Published online 2018 May 1. doi: 10.1038/s41467-018-04145-4
PMCID:
PMC5931518
AbstractArticlePDF–2.1M
19.
Defining essential elements and genetic interactions of the yeast Lsm2–8 ring and demonstration that essentiality of Lsm2–8 is bypassed via overexpression of U6 snRNA or the U6 snRNP subunit Prp24
Allen J. Roth, Stewart Shuman, Beate Schwer
RNA. 2018 Jun; 24(6): 853–864. doi: 10.1261/rna.066175.118
PMCID:
PMC5959253
AbstractArticlePDF–7.4M
20.
lsm1 mutations impairing the ability of the Lsm1p-7p-Pat1p complex to preferentially bind to oligoadenylated RNA affect mRNA decay in vivo
Ashis Chowdhury, Sundaresan Tharun
RNA. 2008 Oct; 14(10): 2149–2158. doi: 10.1261/rna.1094208
PMCID:
PMC2553750
AbstractArticlePDF–717K

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