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Items: 1 to 20 of 23

1.
Genome-wide analysis of mRNA translation profiles in Saccharomycescerevisiae
Yoav Arava, Yulei Wang, John D. Storey, Chih Long Liu, Patrick O. Brown, Daniel Herschlag
Proc Natl Acad Sci U S A. 2003 Apr 1; 100(7): 3889–3894. Published online 2003 Mar 26. doi: 10.1073/pnas.0635171100
PMCID:
PMC153018
AbstractArticlePDF–292K
2.
Global and Specific Translational Regulation in the Genomic Response of Saccharomyces cerevisiae to a Rapid Transfer from a Fermentable to a Nonfermentable Carbon Source
Kenneth M. Kuhn, Joseph L. DeRisi, Patrick O. Brown, Peter Sarnow
Mol Cell Biol. 2001 Feb; 21(3): 916–927. doi: 10.1128/MCB.21.3.916-927.2001
PMCID:
PMC86682
AbstractArticlePDF–3.8M
3.
Atg41/Icy2 regulates autophagosome formation
Zhiyuan Yao, Elizabeth Delorme-Axford, Steven K Backues, Daniel J Klionsky
Autophagy. 2015 Dec; 11(12): 2288–2299. Published online 2015 Nov 13. doi: 10.1080/15548627.2015.1107692
PMCID:
PMC4835205
AbstractArticlePDF–884K
4.
An Autophagy-Independent Role for ATG41 in Sulfur Metabolism During Zinc Deficiency
Michael D. Bucci, Erin Weisenhorn, Spencer Haws, Zhiyuan Yao, Ginelle Zimmerman, Molly Gannon, Janet Taggart, Traci Lee, Daniel J. Klionsky, Jason Russell, Joshua Coon, David J. Eide
Genetics. 2018 Mar; 208(3): 1115–1130. Published online 2018 Jan 10. doi: 10.1534/genetics.117.300679
PMCID:
PMC5844326
AbstractArticlePDF–1.5M
5.
Prion Switching in Response to Environmental Stress
Jens Tyedmers, Maria Lucia Madariaga, Susan Lindquist
PLoS Biol. 2008 Nov; 6(11): e294. Published online 2008 Nov 25. doi: 10.1371/journal.pbio.0060294
PMCID:
PMC2586387
AbstractArticlePDF–487K
6.
DeepPhagy: a deep learning framework for quantitatively measuring autophagy activity in Saccharomyces cerevisiae
Ying Zhang, Yubin Xie, Wenzhong Liu, Wankun Deng, Di Peng, Chenwei Wang, Haodong Xu, Chen Ruan, Yongjie Deng, Yaping Guo, Chenjun Lu, Cong Yi, Jian Ren, Yu Xue
Autophagy. 2020; 16(4): 626–640. Published online 2019 Jun 20. doi: 10.1080/15548627.2019.1632622
PMCID:
PMC7138222
AbstractArticlePDF–8.0M
7.
A Genomic Screen for Yeast Mutants Defective in Selective Mitochondria Autophagy
Tomotake Kanki, Ke Wang, Misuzu Baba, Clinton R. Bartholomew, Melinda A. Lynch-Day, Zhou Du, Jiefei Geng, Kai Mao, Zhifen Yang, Wei-Lien Yen, Daniel J. Klionsky
Mol Biol Cell. 2009 Nov 15; 20(22): 4730–4738. doi: 10.1091/mbc.E09-03-0225
PMCID:
PMC2777103
AbstractArticlePDF–1.3M
8.
A genomic analysis of chronological longevity factors in budding yeast
Christopher R Burtner, Christopher J Murakami, Brady Olsen, Brian K Kennedy, Matt Kaeberlein
Cell Cycle. 2011 May 1; 10(9): 1385–1396. Published online 2011 May 1. doi: 10.4161/cc.10.9.15464
PMCID:
PMC3356828
AbstractArticlePDF–3.2M
9.
Yeast Ssd1 is a non-enzymatic member of the RNase II family with an alternative RNA recognition site
Rosemary A Bayne, Uma Jayachandran, Aleksandra Kasprowicz, Stefan Bresson, David Tollervey, Edward W J Wallace, Atlanta G Cook
Nucleic Acids Res. 2022 Mar 21; 50(5): 2923–2937. Published online 2021 Jul 24. doi: 10.1093/nar/gkab615
PMCID:
PMC8934651
AbstractArticlePDF–4.4M
10.
Tubulin isotypes optimize distinct spindle positioning mechanisms during yeast mitosis
Emmanuel T. Nsamba, Abesh Bera, Michael Costanzo, Charles Boone, Mohan L. Gupta, Jr.
J Cell Biol. 2021 Dec 6; 220(12): e202010155. Published online 2021 Nov 5. doi: 10.1083/jcb.202010155
PMCID:
PMC8576917
AbstractArticlePDF–7.4M
11.
Exploring the Yeast Acetylome Using Functional Genomics
Supipi Kaluarachchi Duffy, Helena Friesen, Anastasia Baryshnikova, Jean-Philippe Lambert, Yolanda T. Chong, Daniel Figeys, Brenda Andrews
Cell. Author manuscript; available in PMC 2014 Aug 30.
Published in final edited form as: Cell. 2012 May 11; 149(4): 936–948. doi: 10.1016/j.cell.2012.02.064
PMCID:
PMC4149804
AbstractArticlePDF–2.1M
12.
Mapping the Synthetic Dosage Lethality Network of CDK1/CDC28
Christine Zimmermann, Ignacio Garcia, Manja Omerzu, Pierre Chymkowitch, Beibei Zhang, Jorrit M. Enserink
G3 (Bethesda) 2017 Jun; 7(6): 1753–1766. Published online 2017 Apr 18. doi: 10.1534/g3.117.042317
Correction in:
G3 (Bethesda). 2019 Aug; 9(8): 2787.
PMCID:
PMC5473755
AbstractArticlePDF–2.7M
13.
Functional characterisation of long intergenic non-coding RNAs through genetic interaction profiling in Saccharomyces cerevisiae
Dimitris Kyriakou, Emmanouil Stavrou, Panayiota Demosthenous, Georgia Angelidou, Bryan-Joseph San Luis, Charles Boone, Vasilis J. Promponas, Antonis Kirmizis
BMC Biol. 2016; 14: 106. Published online 2016 Dec 7. doi: 10.1186/s12915-016-0325-7
PMCID:
PMC5142380
AbstractArticlePDF–1.2M
14.
La-motif–dependent mRNA association with Slf1 promotes copper detoxification in yeast
Luca Schenk, Dominik M. Meinel, Katja Strässer, André P. Gerber
RNA. 2012 Mar; 18(3): 449–461. doi: 10.1261/rna.028506.111
PMCID:
PMC3285933
AbstractArticlePDF–812K
15.
Distinct roles for Khd1p in the localization and expression of bud-localized mRNAs in yeast
Yuko Hasegawa, Kenji Irie, André P. Gerber
RNA. 2008 Nov; 14(11): 2333–2347. doi: 10.1261/rna.1016508
PMCID:
PMC2578860
AbstractArticlePDF–1.3M
16.
Functional wiring of the yeast kinome revealed by global analysis of genetic network motifs
Sara Sharifpoor, Dewald van Dyk, Michael Costanzo, Anastasia Baryshnikova, Helena Friesen, Alison C. Douglas, Ji-Young Youn, Benjamin VanderSluis, Chad L. Myers, Balázs Papp, Charles Boone, Brenda J. Andrews
Genome Res. 2012 Apr; 22(4): 791–801. doi: 10.1101/gr.129213.111
PMCID:
PMC3317160
AbstractArticlePDF–998K
17.
A novel translational control mechanism involving RNA structures within coding sequences
Jennifer Jungfleisch, Danny D. Nedialkova, Ivan Dotu, Katherine E. Sloan, Neus Martinez-Bosch, Lukas Brüning, Emanuele Raineri, Pilar Navarro, Markus T. Bohnsack, Sebastian A. Leidel, Juana Díez
Genome Res. 2017 Jan; 27(1): 95–106. doi: 10.1101/gr.209015.116
Correction in:
Genome Res. 2017 Apr; 27(4): 663.
PMCID:
PMC5204348
AbstractArticlePDF–1.3M
18.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
19.
Purification of Nuclear Poly(A)-binding Protein Nab2 Reveals Association with the Yeast Transcriptome and a Messenger Ribonucleoprotein Core Structure
Julien Batisse, Claire Batisse, Aidan Budd, Bettina Böttcher, Ed Hurt
J Biol Chem. 2009 Dec 11; 284(50): 34911–34917. Published online 2009 Oct 19. doi: 10.1074/jbc.M109.062034
PMCID:
PMC2787353
AbstractArticlePDF–3.8M
20.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M

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