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Select item 54417801.

Different phosphoisoforms of RNA polymerase II engage the Rtt103 termination factor in a structurally analogous manner

Corey M. Nemec, Fan Yang, Joshua M. Gilmore, Corinna Hintermair, Yi-Hsuan Ho, Sandra C. Tseng, Martin Heidemann, Ying Zhang, Laurence Florens, Audrey P. Gasch, Dirk Eick, Michael P. Washburn, Gabriele Varani, Aseem Z. Ansari

Proc Natl Acad Sci U S A. 2017 May 16; 114(20): E3944–E3953. Published online 2017 May 2. doi: 10.1073/pnas.1700128114

PMCID:: PMC5441780

Abstract Article PDF–1.7M

Select item 68474302.

Structure of tRNA methyltransferase complex of Trm7 and Trm734 reveals a novel binding interface for tRNA recognition

Akira Hirata, Keisuke Okada, Kazuaki Yoshii, Hiroyuki Shiraishi, Shinya Saijo, Kento Yonezawa, Nobutaka Shimizu, Hiroyuki Hori

Nucleic Acids Res. 2019 Nov 18; 47(20): 10942–10955. Published online 2019 Oct 5. doi: 10.1093/nar/gkz856

PMCID:: PMC6847430

Abstract Article PDF–4.4M

Select item 42881503.

The conserved histone deacetylase Rpd3 and its DNA binding subunit Ume6 control dynamic transcript architecture during mitotic growth and meiotic development

Aurélie Lardenois, Igor Stuparevic, Yuchen Liu, Michael J. Law, Emmanuelle Becker, Fatima Smagulova, Karl Waern, Marie-Hélène Guilleux, Joe Horecka, Angela Chu, Christine Kervarrec, Randy Strich, Mike Snyder, Ronald W. Davis, Lars M. Steinmetz, Michael Primig

Nucleic Acids Res. 2015 Jan 9; 43(1): 115–128. Published online 2014 Dec 3. doi: 10.1093/nar/gku1185

PMCID:: PMC4288150

Abstract Article PDF–3.1M

Select item 32040714.

Two novel WD40 domain–containing proteins, Ere1 and Ere2, function in the retromer-mediated endosomal recycling pathway

Yufeng Shi, Christopher J. Stefan, Sarah M. Rue, David Teis, Scott D. Emr

Mol Biol Cell. 2011 Nov 1; 22(21): 4093–4107. doi: 10.1091/mbc.E11-05-0440

PMCID:: PMC3204071

Abstract Article PDF–4.3M

Select item 22060715.

Chromatin-Associated Genes Protect the Yeast Genome From Ty1 Insertional Mutagenesis

Katherine M. Nyswaner, Mary Ann Checkley, Ming Yi, Robert M. Stephens, David J. Garfinkel

Genetics. 2008 Jan; 178(1): 197–214. doi: 10.1534/genetics.107.082602

PMCID:: PMC2206071

Abstract Article PDF–1.2M

Select item 42746386.

Conservation of an intricate circuit for crucial modifications of the tRNA^Phe anticodon loop in eukaryotes

Michael P. Guy, Eric M. Phizicky

RNA. 2015 Jan; 21(1): 61–74. doi: 10.1261/rna.047639.114

PMCID:: PMC4274638

Abstract Article PDF–1.1M

Select item 58929437.

Lack of 2'-O-methylation in the tRNA anticodon loop of two phylogenetically distant yeast species activates the general amino acid control pathway

Lu Han, Michael P. Guy, Yoshiko Kon, Eric M. Phizicky

PLoS Genet. 2018 Mar; 14(3): e1007288. Published online 2018 Mar 29. doi: 10.1371/journal.pgen.1007288

PMCID:: PMC5892943

Abstract Article PDF–6.6M

Select item 34467148.

Yeast Trm7 interacts with distinct proteins for critical modifications of the tRNA^Phe anticodon loop

Michael P. Guy, Brandon M. Podyma, Melanie A. Preston, Hussam H. Shaheen, Kady L. Krivos, Patrick A. Limbach, Anita K. Hopper, Eric M. Phizicky

RNA. 2012 Oct; 18(10): 1921–1933. doi: 10.1261/rna.035287.112

PMCID:: PMC3446714

Abstract Article PDF–819K

Select item 57286829.

Transcriptome-wide analysis of roles for tRNA modifications in translational regulation

Hsin-Jung Chou, Elisa Donnard, H. Tobias Gustafsson, Manuel Garber, Oliver J. Rando

Mol Cell. Author manuscript; available in PMC 2018 Dec 7.

Published in final edited form as: Mol Cell. 2017 Dec 7; 68(5): 978–992.e4. Published online 2017 Nov 30. doi: 10.1016/j.molcel.2017.11.002

PMCID:: PMC5728682

Abstract Article PDF–3.0M

Select item 770806310.

The catalytic activity of the translation termination factor methyltransferase Mtq2-Trm112 complex is required for large ribosomal subunit biogenesis

Caroline Lacoux, Ludivine Wacheul, Kritika Saraf, Nicolas Pythoud, Emmeline Huvelle, Sabine Figaro, Marc Graille, Christine Carapito, Denis L J Lafontaine, Valérie Heurgué-Hamard

Nucleic Acids Res. 2020 Dec 2; 48(21): 12310–12325. Published online 2020 Nov 9. doi: 10.1093/nar/gkaa972

PMCID:: PMC7708063

Abstract Article PDF–4.8M

Select item 295043611.

Sulfate Assimilation Mediates Tellurite Reduction and Toxicity in Saccharomyces cerevisiae

Lars-Göran Ottosson, Katarina Logg, Sebastian Ibstedt, Per Sunnerhagen, Mikael Käll, Anders Blomberg, Jonas Warringer

Eukaryot Cell. 2010 Oct; 9(10): 1635–1647. doi: 10.1128/EC.00078-10

PMCID:: PMC2950436

Abstract Article PDF–3.2M

Select item 290335512.

J Domain Co-chaperone Specificity Defines the Role of BiP during Protein Translocation

Shruthi S. Vembar, Martin C. Jonikas, Linda M. Hendershot, Jonathan S. Weissman, Jeffrey L. Brodsky

J Biol Chem. 2010 Jul 16; 285(29): 22484–22494. Published online 2010 Apr 29. doi: 10.1074/jbc.M110.102186

PMCID:: PMC2903355

Abstract Article PDF–1.9M

Select item 842120413.

Investigation of RNA metabolism through large-scale genetic interaction profiling in yeast

Laurence Decourty, Christophe Malabat, Emmanuel Frachon, Alain Jacquier, Cosmin Saveanu

Nucleic Acids Res. 2021 Sep 7; 49(15): 8535–8555. Published online 2021 Aug 6. doi: 10.1093/nar/gkab680

PMCID:: PMC8421204

Abstract Article PDF–2.9M

Select item 459300014.

Genetic Networks Required to Coordinate Chromosome Replication by DNA Polymerases α, δ, and ε in Saccharomyces cerevisiae

Marion Dubarry, Conor Lawless, A. Peter Banks, Simon Cockell, David Lydall

G3 (Bethesda) 2015 Oct; 5(10): 2187–2197. Published online 2015 Aug 21. doi: 10.1534/g3.115.021493

PMCID:: PMC4593000

Abstract Article PDF–1.8M

Select item 514238015.

Functional characterisation of long intergenic non-coding RNAs through genetic interaction profiling in Saccharomyces cerevisiae

Dimitris Kyriakou, Emmanouil Stavrou, Panayiota Demosthenous, Georgia Angelidou, Bryan-Joseph San Luis, Charles Boone, Vasilis J. Promponas, Antonis Kirmizis

BMC Biol. 2016; 14: 106. Published online 2016 Dec 7. doi: 10.1186/s12915-016-0325-7

PMCID:: PMC5142380

Abstract Article PDF–1.2M

Select item 611694916.

A Genome-Wide Screen Reveals a Role for the HIR Histone Chaperone Complex in Preventing Mislocalization of Budding Yeast CENP-A

Sultan Ciftci-Yilmaz, Wei-Chun Au, Prashant K. Mishra, Jessica R. Eisenstatt, Joy Chang, Anthony R. Dawson, Iris Zhu, Mahfuzur Rahman, Sven Bilke, Michael Costanzo, Anastasia Baryshnikova, Chad L. Myers, Paul S. Meltzer, David Landsman, Richard E. Baker, Charles Boone, Munira A. Basrai

Genetics. 2018 Sep; 210(1): 203–218. Published online 2018 Jul 16. doi: 10.1534/genetics.118.301305

PMCID:: PMC6116949

Abstract Article PDF–2.1M

Select item 271086217.

An atlas of chaperone–protein interactions in Saccharomyces cerevisiae: implications to protein folding pathways in the cell

Yunchen Gong, Yoshito Kakihara, Nevan Krogan, Jack Greenblatt, Andrew Emili, Zhaolei Zhang, Walid A Houry

Mol Syst Biol. 2009; 5: 275. Published online 2009 Jun 16. doi: 10.1038/msb.2009.26

PMCID:: PMC2710862

Abstract Article PDF–3.2M

Select item 504769318.

Systematic identification of genes involved in metabolic acid stress resistance in yeast and their potential as cancer targets

John J. Shin, Qurratulain Aftab, Pamela Austin, Jennifer A. McQueen, Tak Poon, Shu Chen Li, Barry P. Young, Calvin D. Roskelley, Christopher J. R. Loewen

Dis Model Mech. 2016 Sep 1; 9(9): 1039–1049. doi: 10.1242/dmm.023374

PMCID:: PMC5047693

Abstract Article

Select item 928602319.

Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion

Mark Mattingly, Chris Seidel, Sofía Muñoz, Yan Hao, Ying Zhang, Zhihui Wen, Laurence Florens, Frank Uhlmann, Jennifer L. Gerton

Curr Biol. 2022 Jul 11; 32(13): 2884–2896.e6. doi: 10.1016/j.cub.2022.05.019

PMCID:: PMC9286023

Abstract Article

Select item 963098620.

A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans

Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor

Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136