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Select item 31661721.

Genome-Wide Functional Profiling Reveals Genes Required for Tolerance to Benzene Metabolites in Yeast

Matthew North, Vickram J. Tandon, Reuben Thomas, Alex Loguinov, Inna Gerlovina, Alan E. Hubbard, Luoping Zhang, Martyn T. Smith, Chris D. Vulpe

PLoS One. 2011; 6(8): e24205. Published online 2011 Aug 30. doi: 10.1371/journal.pone.0024205

PMCID:: PMC3166172

Abstract Article PDF–908K

Select item 22685632.

A systems approach to delineate functions of paralogous transcription factors: Role of the Yap family in the DNA damage response

Kai Tan, Hoda Feizi, Colin Luo, Stephanie H. Fan, Timothy Ravasi, Trey G. Ideker

Proc Natl Acad Sci U S A. 2008 Feb 26; 105(8): 2934–2939. Published online 2008 Feb 19. doi: 10.1073/pnas.0708670105

PMCID:: PMC2268563

Abstract Article PDF–398K

Select item 2325553.

Yap, a novel family of eight bZIP proteins in Saccharomyces cerevisiae with distinct biological functions.

L Fernandes, C Rodrigues-Pousada, K Struhl

Mol Cell Biol. 1997 Dec; 17(12): 6982–6993. doi: 10.1128/mcb.17.12.6982

PMCID:: PMC232555

Summary PDF–1.9M

Select item 33707524.

A Potent Plant-Derived Antifungal Acetylenic Acid Mediates Its Activity by Interfering with Fatty Acid Homeostasis

Tao Xu, Siddharth K. Tripathi, Qin Feng, Michael C. Lorenz, Marsha A. Wright, Melissa R. Jacob, Melanie M. Mask, Scott R. Baerson, Xing-Cong Li, Alice M. Clark, Ameeta K. Agarwal

Antimicrob Agents Chemother. 2012 Jun; 56(6): 2894–2907. doi: 10.1128/AAC.05663-11

PMCID:: PMC3370752

Abstract Article PDF–2.7M

Select item 70083625.

The mitochondrial iron exporter genes MMT1 and MMT2 in yeast are transcriptionally regulated by Aft1 and Yap1

Liangtao Li, Sophie Bertram, Jerry Kaplan, Xuan Jia, Diane M. Ward

J Biol Chem. 2020 Feb 7; 295(6): 1716–1726. Published online 2020 Jan 2. doi: 10.1074/jbc.RA119.011154

PMCID:: PMC7008362

Abstract Article PDF–2.9M

Select item 27903426.

A Phenotypic Profile of the Candida albicans Regulatory Network

Oliver R. Homann, Jeanselle Dea, Suzanne M. Noble, Alexander D. Johnson

PLoS Genet. 2009 Dec; 5(12): e1000783. Published online 2009 Dec 24. doi: 10.1371/journal.pgen.1000783

PMCID:: PMC2790342

Abstract Article PDF–1.9M

Select item 21745317.

Yeast Screens Identify the RNA Polymerase II CTD and SPT5 as Relevant Targets of BRCA1 Interaction

Craig B. Bennett, Tammy J. Westmoreland, Carmel S. Verrier, Carrie A. B. Blanchette, Tiffany L. Sabin, Hemali P. Phatnani, Yuliya V. Mishina, Gudrun Huper, Alice L. Selim, Ernest R. Madison, Dominique D. Bailey, Adebola I. Falae, Alvaro Galli, John A. Olson, Jr, Arno L. Greenleaf, Jeffrey R. Marks

PLoS One. 2008; 3(1): e1448. Published online 2008 Jan 16. doi: 10.1371/journal.pone.0001448

PMCID:: PMC2174531

Abstract Article PDF–1.0M

Select item 27437308.

A new library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters

Gwenael Badis, Esther T. Chan, Harm van Bakel, Lourdes Pena-Castillo, Desiree Tillo, Kyle Tsui, Clayton D. Carlson, Andrea J. Gossett, Michael J. Hasinoff, Christopher L. Warren, Marinella Gebbia, Shaheynoor Talukder, Ally Yang, Sanie Mnaimneh, Dimitri Terterov, David Coburn, Ai Li Yeo, Zhen Xuan Yeo, Neil D. Clarke, Jason D. Lieb, Aseem Z. Ansari, Corey Nislow, Timothy R. Hughes

Mol Cell. Author manuscript; available in PMC 2009 Dec 26.

Published in final edited form as: Mol Cell. 2008 Dec 26; 32(6): 878–887. doi: 10.1016/j.molcel.2008.11.020

PMCID:: PMC2743730

Abstract Article PDF–4.9M

Select item 53457219.

Functional Analysis of Kinases and Transcription Factors in Saccharomyces cerevisiae Using an Integrated Overexpression Library

Ji-Young Youn, Helena Friesen, Alex N. Nguyen Ba, Wendy Liang, Vincent Messier, Mike J. Cox, Alan M. Moses, Brenda Andrews

G3 (Bethesda) 2017 Mar; 7(3): 911–921. Published online 2017 Jan 22. doi: 10.1534/g3.116.038471

PMCID:: PMC5345721

Abstract Article PDF–1.6M

Select item 1052113710.

Checkpoint kinase interaction with DNA polymerase alpha regulates replication progression during stress

Andreas Hadjicharalambous, Alex J. Whale, Geylani Can, J. Mark Skehel, Jonathan M. Houseley, Philip Zegerman

Version 1. Wellcome Open Res. 2023; 8: 327. Published online 2023 Jul 26. doi: 10.12688/wellcomeopenres.19617.1

PMCID:: PMC10521137

Abstract Article PDF–4.0M

Select item 199573511.

A Protein Interaction Map of the Mitotic Spindle

Jonathan Wong, Yuko Nakajima, Stefan Westermann, Ching Shang, Jung-seog Kang, Crystal Goodner, Pantea Houshmand, Stanley Fields, Clarence S.M. Chan, David Drubin, Georjana Barnes, Tony Hazbun

Mol Biol Cell. 2007 Oct; 18(10): 3800–3809. doi: 10.1091/mbc.E07-06-0536

PMCID:: PMC1995735

Abstract Article PDF–796K

Select item 300618712.

Rewiring of Genetic Networks in Response to DNA Damage

Sourav Bandyopadhyay, Monika Mehta, Dwight Kuo, Min-Kyung Sung, Ryan Chuang, Eric J. Jaehnig, Bernd Bodenmiller, Katherine Licon, Wilbert Copeland, Michael Shales, Dorothea Fiedler, Janusz Dutkowski, Aude Guénolé, Haico van Attikum, Kevan M. Shokat, Richard D. Kolodner, Won-Ki Huh, Ruedi Aebersold, Michael-Christopher Keogh, Nevan J. Krogan, Trey Ideker

Science. Author manuscript; available in PMC 2010 Dec 21.

Published in final edited form as: Science. 2010 Dec 3; 330(6009): 1385–1389. doi: 10.1126/science.1195618

Correction in:: volume 331 on page 284

PMCID:: PMC3006187

Abstract Article PDF–1.9M

Select item 307093813.

Diverse protein kinase interactions identified by protein microarrays reveal novel connections between cellular processes

Joseph Fasolo, Andrea Sboner, Mark G.F. Sun, Haiyuan Yu, Rui Chen, Donald Sharon, Philip M. Kim, Mark Gerstein, Michael Snyder

Genes Dev. 2011 Apr; 25(7): 767–778. doi: 10.1101/gad.1998811

PMCID:: PMC3070938

Abstract Article PDF–1.2M

Select item 271086214.

An atlas of chaperone–protein interactions in Saccharomyces cerevisiae: implications to protein folding pathways in the cell

Yunchen Gong, Yoshito Kakihara, Nevan Krogan, Jack Greenblatt, Andrew Emili, Zhaolei Zhang, Walid A Houry

Mol Syst Biol. 2009; 5: 275. Published online 2009 Jun 16. doi: 10.1038/msb.2009.26

PMCID:: PMC2710862

Abstract Article PDF–3.2M

Select item 756021615.

AP‐3 vesicle uncoating occurs after HOPS‐dependent vacuole tethering

Jannis Schoppe, Muriel Mari, Erdal Yavavli, Kathrin Auffarth, Margarita Cabrera, Stefan Walter, Florian Fröhlich, Christian Ungermann

EMBO J. 2020 Oct 15; 39(20): e105117. Published online 2020 Aug 25. doi: 10.15252/embj.2020105117

PMCID:: PMC7560216

Abstract Article PDF–3.6M

Select item 1110948316.

K48- and K63-linked ubiquitin chain interactome reveals branch- and length-specific ubiquitin interactors

Anita Waltho, Oliver Popp, Christopher Lenz, Lukas Pluska, Mahil Lambert, Volker Dötsch, Philipp Mertins, Thomas Sommer

Life Sci Alliance. 2024 Aug; 7(8): e202402740. Published online 2024 May 21. doi: 10.26508/lsa.202402740

PMCID:: PMC11109483

Abstract Article PDF–2.9M

Select item 274675317.

High Quality Binary Protein Interaction Map of the Yeast Interactome Network

Haiyuan Yu, Pascal Braun, Muhammed A. Yildirim, Irma Lemmens, Kavitha Venkatesan, Julie Sahalie, Tomoko Hirozane-Kishikawa, Fana Gebreab, Na Li, Nicolas Simonis, Tong Hao, Jean-Francois Rual, Amélie Dricot, Alexei Vazquez, Ryan R. Murray, Christophe Simon, Leah Tardivo, Stanley Tam, Nenad Svrzikapa, Changyu Fan, Anne-Sophie de Smet, Adriana Motyl, Michael E. Hudson, Juyong Park, Xiaofeng Xin, Michael E. Cusick, Troy Moore, Charlie Boone, Michael Snyder, Frederick P. Roth, Albert-László Barabási, Jan Tavernier, David E. Hill, Marc Vidal

Science. Author manuscript; available in PMC 2009 Sep 18.

Published in final edited form as: Science. 2008 Oct 3; 322(5898): 104–110. Published online 2008 Aug 21. doi: 10.1126/science.1158684

PMCID:: PMC2746753

Abstract Article PDF–2.2M

Select item 983634818.

A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast

Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger

G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296

PMCID:: PMC9836348

Abstract Article PDF–857K

Select item 331716019.

Functional wiring of the yeast kinome revealed by global analysis of genetic network motifs

Sara Sharifpoor, Dewald van Dyk, Michael Costanzo, Anastasia Baryshnikova, Helena Friesen, Alison C. Douglas, Ji-Young Youn, Benjamin VanderSluis, Chad L. Myers, Balázs Papp, Charles Boone, Brenda J. Andrews

Genome Res. 2012 Apr; 22(4): 791–801. doi: 10.1101/gr.129213.111

PMCID:: PMC3317160

Abstract Article PDF–998K

Select item 278735320.

Purification of Nuclear Poly(A)-binding Protein Nab2 Reveals Association with the Yeast Transcriptome and a Messenger Ribonucleoprotein Core Structure

Julien Batisse, Claire Batisse, Aidan Budd, Bettina Böttcher, Ed Hurt

J Biol Chem. 2009 Dec 11; 284(50): 34911–34917. Published online 2009 Oct 19. doi: 10.1074/jbc.M109.062034

PMCID:: PMC2787353

Abstract Article PDF–3.8M

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