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Items: 11

Select item 102387391.

Interaction with single-stranded DNA-binding protein modulates Escherichia coli RadD DNA repair activities

Miguel A. Osorio Garcia, Elizabeth A. Wood, James L. Keck, Michael M. Cox

J Biol Chem. 2023 Jun; 299(6): 104773. Published online 2023 May 2. doi: 10.1016/j.jbc.2023.104773

PMCID:: PMC10238739

Abstract Article PDF–2.6M

Select item 98211082.

Biochemical and Structural Analyses Shed Light on the Mechanisms of RadD DNA Binding and Its ATPase from Escherichia coli

Li-Fei Tian, Xiaolin Kuang, Ke Ding, Hongwei Gao, Qun Tang, Xiao-Xue Yan, Wenqing Xu

Int J Mol Sci. 2023 Jan; 24(1): 741. Published online 2023 Jan 1. doi: 10.3390/ijms24010741

PMCID:: PMC9821108

Abstract Article PDF–4.5M

Select item 43395303.

Escherichia coli radD (yejH) gene: a novel function involved in radiation resistance and double-strand break repair

Stefanie H. Chen, Rose T. Byrne, Elizabeth A. Wood, Michael M. Cox

Mol Microbiol. Author manuscript; available in PMC 2016 Mar 1.

Published in final edited form as: Mol Microbiol. 2015 Mar; 95(5): 754–768. Published online 2015 Jan 16. doi: 10.1111/mmi.12885

PMCID:: PMC4339530

Abstract Article PDF–4.7M

Select item 71456544.

Frequent template switching in postreplication gaps: suppression of deleterious consequences by the Escherichia coli Uup and RadD proteins

Zachary J Romero, Thomas J Armstrong, Sarah S Henrikus, Stefanie H Chen, David J Glass, Alexander E Ferrazzoli, Elizabeth A Wood, Sindhu Chitteni-Pattu, Antoine M van Oijen, Susan T Lovett, Andrew Robinson, Michael M Cox

Nucleic Acids Res. 2020 Jan 10; 48(1): 212–230. Published online 2019 Oct 30. doi: 10.1093/nar/gkz960

PMCID:: PMC7145654

Abstract Article PDF–11M

Select item 50340665.

Escherichia coli RadD Protein Functionally Interacts with the Single-stranded DNA-binding Protein

Stefanie H. Chen, Rose T. Byrne-Nash, Michael M. Cox

J Biol Chem. 2016 Sep 23; 291(39): 20779–20786. Published online 2016 Aug 12. doi: 10.1074/jbc.M116.736223

PMCID:: PMC5034066

Abstract Article PDF–1.1M

Select item 74709586.

Resolving Toxic DNA repair intermediates in every E. coli replication cycle: critical roles for RecG, Uup and RadD

Zachary J Romero, Stefanie H Chen, Thomas Armstrong, Elizabeth A Wood, Antoine van Oijen, Andrew Robinson, Michael M Cox

Nucleic Acids Res. 2020 Sep 4; 48(15): 8445–8460. Published online 2020 Jul 9. doi: 10.1093/nar/gkaa579

PMCID:: PMC7470958

Abstract Article PDF–11M

Select item 41876917.

Escherichia coli Genes and Pathways Involved in Surviving Extreme Exposure to Ionizing Radiation

Rose T. Byrne, Stefanie H. Chen, Elizabeth A. Wood, Eric L. Cabot, Michael M. Cox

J Bacteriol. 2014 Oct; 196(20): 3534–3545. doi: 10.1128/JB.01589-14

PMCID:: PMC4187691

Abstract Article PDF–1.1M

Select item 36145488.

Harnessing Single Cell Sorting to Identify Cell Division Genes and Regulators in Bacteria

Catherine Burke, Michael Liu, Warwick Britton, James A. Triccas, Torsten Thomas, Adrian L. Smith, Steven Allen, Robert Salomon, Elizabeth Harry

PLoS One. 2013; 8(4): e60964. Published online 2013 Apr 2. doi: 10.1371/journal.pone.0060964

PMCID:: PMC3614548

Abstract Article PDF–2.6M

Select item 41238559.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 168148110.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 132520011.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405