PMC Links for Gene (Select 946364) - PMC

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Items: 14

Select item 17644381.

Large-Scale Mapping and Validation of Escherichia coli Transcriptional Regulation from a Compendium of Expression Profiles

Jeremiah J Faith, Boris Hayete, Joshua T Thaden, Ilaria Mogno, Jamey Wierzbowski, Guillaume Cottarel, Simon Kasif, James J Collins, Timothy S Gardner

PLoS Biol. 2007 Jan; 5(1): e8. Published online 2007 Jan 9. doi: 10.1371/journal.pbio.0050008

PMCID:: PMC1764438

Abstract Article PDF–1.3M

Select item 888112.

Evaluation of thresholds for the detection of binding sites for regulatory proteins in Escherichia coli K12 DNA

Esperanza Benítez-Bellón, Gabriel Moreno-Hagelsieb, Julio Collado-Vides

Genome Biol. 2002; 3(3): research0013.1–research0013.16. Published online 2002 Feb 21. doi: 10.1186/gb-2002-3-3-research0013

PMCID:: PMC88811

Abstract Article PDF–208K

Select item 301763.

A genomic approach to gene fusion technology

Tina K. Van Dyk, Yan Wei, Michael K. Hanafey, Maureen Dolan, Mary Jane G. Reeve, J. Antoni Rafalski, Lucia B. Rothman-Denes, Robert A. LaRossa

Proc Natl Acad Sci U S A. 2001 Feb 27; 98(5): 2555–2560. Published online 2001 Feb 13. doi: 10.1073/pnas.041620498

PMCID:: PMC30176

Abstract Article PDF–135K

Select item 16937074.

Reconstructing repressor protein levels from expression of gene targets in Escherichia coli

R. Khanin, V. Vinciotti, E. Wit

Proc Natl Acad Sci U S A. 2006 Dec 5; 103(49): 18592–18596. Published online 2006 Nov 22. doi: 10.1073/pnas.0603390103

PMCID:: PMC1693707

Abstract Article PDF–321K

Select item 13046875.

LexA-DNA Bond Strength by Single Molecule Force Spectroscopy

F. Kühner, L. T. Costa, P. M. Bisch, S. Thalhammer, W. M. Heckl, H. E. Gaub

Biophys J. 2004 Oct; 87(4): 2683–2690. doi: 10.1529/biophysj.104.048868

PMCID:: PMC1304687

Abstract Article PDF–234K

Select item 12767356.

Genomic analysis of LexA binding reveals the permissive nature of the Escherichia coli genome and identifies unconventional target sites

Joseph T. Wade, Nikos B. Reppas, George M. Church, Kevin Struhl

Genes Dev. 2005 Nov 1; 19(21): 2619–2630. doi: 10.1101/gad.1355605

PMCID:: PMC1276735

Abstract Article PDF–414K

Select item 12516287.

Analysis of Global Gene Expression and Double-Strand-Break Formation in DNA Adenine Methyltransferase- and Mismatch Repair-Deficient Escherichia coli

Jennifer L. Robbins-Manke, Zoran Z. Zdraveski, Martin Marinus, John M. Essigmann

J Bacteriol. 2005 Oct; 187(20): 7027–7037. doi: 10.1128/JB.187.20.7027-7037.2005

PMCID:: PMC1251628

Abstract Article PDF–336K

Select item 27835688.

Proteolysis in the SOS response and metal homeostasis in Escherichia coli

Mihaela Pruteanu, Tania A. Baker

Res Microbiol. Author manuscript; available in PMC 2010 Nov 1.

Published in final edited form as: Res Microbiol. 2009 Nov; 160(9): 677–683. Published online 2009 Sep 10. doi: 10.1016/j.resmic.2009.08.012

PMCID:: PMC2783568

Abstract Article PDF–341K

Select item 954049.

DNA Microarray-Based Identification of Genes Controlled by Autoinducer 2-Stimulated Quorum Sensing in Escherichia coli

Matthew P. DeLisa, Chi-Fang Wu, Liang Wang, James J. Valdes, William E. Bentley

J Bacteriol. 2001 Sep; 183(18): 5239–5247. doi: 10.1128/JB.183.18.5239-5247.2001

PMCID:: PMC95404

Abstract Article PDF–387K

Select item 18752810.

Factors Influencing the Identification of Transcription Factor Binding Sites by Cross-Species Comparison

Lee Ann McCue, William Thompson, C. Steven Carmack, Charles E. Lawrence

Genome Res. 2002 Oct; 12(10): 1523–1532. doi: 10.1101/gr.323602

PMCID:: PMC187528

Abstract Article PDF–192K

Select item 26210211.

A Novel Family of Escherichia coli Toxin-Antitoxin Gene Pairs

Jason M. Brown, Karen Joy Shaw

J Bacteriol. 2003 Nov; 185(22): 6600–6608. doi: 10.1128/JB.185.22.6600-6608.2003

PMCID:: PMC262102

Abstract Article PDF–848K

Select item 229217712.

Protein abundance profiling of the Escherichia coli cytosol

Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman

BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102

PMCID:: PMC2292177

Abstract Article PDF–1.0M

Select item 168148113.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 132520014.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405