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1.
Reaction mechanism of the ε subunit of E. coli DNA polymerase III: Insights into active site metal coordination and catalytically significant residues
G. Andrés Cisneros, Lalith Perera, Roel M. Schaaper, Lars C. Pedersen, Robert E. London, Lee G. Pedersen, Thomas A. Darden
J Am Chem Soc. Author manuscript; available in PMC 2010 Feb 4.
Published in final edited form as: J Am Chem Soc. 2009 Feb 4; 131(4): 1550–1556. doi: 10.1021/ja8082818
PMCID:
PMC2652123
AbstractArticlePDF–1.9M
2.
Proofreading and Secondary Structure Processing Determine the Orientation Dependence of CAG·CTG Trinucleotide Repeat Instability in Escherichia coli
Rabaab Zahra, John K. Blackwood, Jill Sales, David R. F. Leach
Genetics. 2007 May; 176(1): 27–41. doi: 10.1534/genetics.106.069724
PMCID:
PMC1893049
AbstractArticlePDF–1.2M
3.
Mutator strains of Escherichia coli, mutD and dnaQ, with defective exonucleolytic editing by DNA polymerase III holoenzyme.
H Echols, C Lu, P M Burgers
Proc Natl Acad Sci U S A. 1983 Apr; 80(8): 2189–2192. doi: 10.1073/pnas.80.8.2189
PMCID:
PMC393783
SummaryPage BrowsePDF–888K
4.
A separate editing exonuclease for DNA replication: the epsilon subunit of Escherichia coli DNA polymerase III holoenzyme.
R H Scheuermann, H Echols
Proc Natl Acad Sci U S A. 1984 Dec; 81(24): 7747–7751. doi: 10.1073/pnas.81.24.7747
PMCID:
PMC392229
SummaryPage BrowsePDF–1.0M
5.
Identification of the epsilon-subunit of Escherichia coli DNA polymerase III holoenzyme as the dnaQ gene product: a fidelity subunit for DNA replication.
R Scheuermann, S Tam, P M Burgers, C Lu, H Echols
Proc Natl Acad Sci U S A. 1983 Dec; 80(23): 7085–7089. doi: 10.1073/pnas.80.23.7085
PMCID:
PMC389997
SummaryPage BrowsePDF–1.6M
6.
Levels of epsilon, an essential replication subunit of Escherichia coli DNA polymerase III, are controlled by heat shock proteins.
P L Foster, M G Marinus
J Bacteriol. 1992 Dec; 174(23): 7509–7516. doi: 10.1128/jb.174.23.7509-7516.1992
PMCID:
PMC207460
SummaryPage BrowsePDF–1.5M
7.
Mutational analysis of the 3'-->5' proofreading exonuclease of Escherichia coli DNA polymerase III.
S A Taft-Benz, R M Schaaper
Nucleic Acids Res. 1998 Sep 1; 26(17): 4005–4011. doi: 10.1093/nar/26.17.4005
PMCID:
PMC147785
SummaryPDF–156K
8.
The C-Terminal Domain of DnaQ Contains the Polymerase Binding Site
Sharon A. Taft-Benz, Roel M. Schaaper
J Bacteriol. 1999 May; 181(9): 2963–2965. doi: 10.1128/jb.181.9.2963-2965.1999
PMCID:
PMC93745
AbstractArticlePDF–63K
9.
Mutants in the Exo I motif of Escherichia coli dnaQ: defective proofreading and inviability due to error catastrophe.
I J Fijalkowska, R M Schaaper
Proc Natl Acad Sci U S A. 1996 Apr 2; 93(7): 2856–2861. doi: 10.1073/pnas.93.7.2856
PMCID:
PMC39723
SummaryPage BrowsePDF–1.3M
10.
Single‐molecule mechanochemical characterization of E. coli pol III core catalytic activity
M. Nabuan Naufer, David A. Murison, Ioulia Rouzina, Penny J. Beuning, Mark C. Williams
Protein Sci. 2017 Jul; 26(7): 1413–1426. Published online 2017 Mar 16. doi: 10.1002/pro.3152
PMCID:
PMC5477539
AbstractArticlePDF–756K
11.
Self-correcting mismatches during high-fidelity DNA replication
Rafael Fernandez-Leiro, Julian Conrad, Ji-Chun Yang, Stefan M. V. Freund, Sjors H. W. Scheres, Meindert H. Lamers
Nat Struct Mol Biol. Author manuscript; available in PMC 2017 Aug 1.
Published in final edited form as: Nat Struct Mol Biol. 2017 Feb; 24(2): 140–143. Published online 2017 Jan 9. doi: 10.1038/nsmb.3348
PMCID:
PMC5300136
AbstractArticlePDF–1.3M
12.
The ɛ Subunit of DNA Polymerase III Is Involved in the Nalidixic Acid-Induced SOS Response in Escherichia coli
Jennifer Reineke Pohlhaus, David T. Long, Erin O'Reilly, Kenneth N. Kreuzer
J Bacteriol. 2008 Aug; 190(15): 5239–5247. Published online 2008 Jun 6. doi: 10.1128/JB.00173-08
PMCID:
PMC2493257
AbstractArticlePDF–291K
13.
Application of electrospray ionization mass spectrometry to study the hydrophobic interaction between the ɛ and θ subunits of DNA polymerase III
Rajesh Gupta, Samir M. Hamdan, Nicholas E. Dixon, Margaret M. Sheil, Jennifer L. Beck
Protein Sci. 2004 Nov; 13(11): 2878–2887. doi: 10.1110/ps.04889604
PMCID:
PMC2286593
AbstractArticlePDF–155K
14.
Structure of the Escherichia coli DNA Polymerase III ε-HOT Proofreading Complex
Thomas W. Kirby, Scott Harvey, Eugene F. DeRose, Sergey Chalov, Anna K. Chikova, Fred W. Perrino, Roel M. Schaaper, Robert E. London, Lars C. Pedersen
J Biol Chem. Author manuscript; available in PMC 2007 May 24.
Published in final edited form as: J Biol Chem. 2006 Dec 15; 281(50): 38466–38471. Published online 2006 Sep 13. doi: 10.1074/jbc.M606917200
PMCID:
PMC1876720
AbstractArticlePDF–744K
15.
Mutator and Antimutator Effects of the Bacteriophage P1 hot Gene Product
Anna K. Chikova, Roel M. Schaaper
J Bacteriol. 2006 Aug; 188(16): 5831–5838. doi: 10.1128/JB.00630-06
PMCID:
PMC1540081
AbstractArticlePDF–230K
16.
Structure of the θ Subunit of Escherichia coli DNA Polymerase III in Complex with the ɛ Subunit
Max A. Keniry, Ah Young Park, Elisabeth A. Owen, Samir M. Hamdan, Guido Pintacuda, Gottfried Otting, Nicholas E. Dixon
J Bacteriol. 2006 Jun; 188(12): 4464–4473. doi: 10.1128/JB.01992-05
PMCID:
PMC1482953
AbstractArticlePDF–583K
17.
The Bacteriophage P1 hot Gene Product Can Substitute for the Escherichia coli DNA Polymerase III θ Subunit
Anna K. Chikova, Roel M. Schaaper
J Bacteriol. 2005 Aug; 187(16): 5528–5536. doi: 10.1128/JB.187.16.5528-5536.2005
PMCID:
PMC1196078
AbstractArticlePDF–391K
18.
Induction of dnaN and dnaQ gene expression in Escherichia coli by alkylation damage to DNA.
A Quiñones, J Kaasch, M Kaasch, W Messer
EMBO J. 1989 Feb; 8(2): 587–593. doi: 10.1002/j.1460-2075.1989.tb03413.x
PMCID:
PMC400845
SummaryPage BrowsePDF–1.2M
19.
Structure and expression of the dnaQ mutator and the RNase H genes of Escherichia coli: overlap of the promoter regions.
H Maki, T Horiuchi, M Sekiguchi
Proc Natl Acad Sci U S A. 1983 Dec; 80(23): 7137–7141. doi: 10.1073/pnas.80.23.7137
PMCID:
PMC390008
SummaryPage BrowsePDF–1.2M
20.
The θ Subunit of Escherichia coli DNA Polymerase III: a Role in Stabilizing the ɛ Proofreading Subunit
Sharon A. Taft-Benz, Roel M. Schaaper
J Bacteriol. 2004 May; 186(9): 2774–2780. doi: 10.1128/JB.186.9.2774-2780.2004
PMCID:
PMC387820
AbstractArticlePDF–239K

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