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Items: 1 to 20 of 34

1.
The RNA chaperone StpA enables fast RNA refolding by destabilization of mutually exclusive base pairs within competing secondary structure elements
Katharina F Hohmann, Anja Blümler, Alexander Heckel, Boris Fürtig
Nucleic Acids Res. 2021 Nov 8; 49(19): 11337–11349. Published online 2021 Oct 6. doi: 10.1093/nar/gkab876
PMCID:
PMC8565331
AbstractArticlePDF–4.1M
2.
Gene silencing H-NS paralogue StpA forms a rigid protein filament along DNA that blocks DNA accessibility
Ci Ji Lim, Yixun R. Whang, Linda J. Kenney, Jie Yan
Nucleic Acids Res. 2012 Apr; 40(8): 3316–3328. Published online 2011 Dec 23. doi: 10.1093/nar/gkr1247
PMCID:
PMC3333869
AbstractArticlePDF–6.7M
3.
RNA chaperone activity and RNA-binding properties of the E. coli protein StpA
Oliver Mayer, Lukas Rajkowitsch, Christina Lorenz, Robert Konrat, Renée Schroeder
Nucleic Acids Res. 2007 Feb; 35(4): 1257–1269. Published online 2007 Jan 31. doi: 10.1093/nar/gkl1143
PMCID:
PMC1851640
AbstractArticlePDF–2.6M
4.
Escherichia coli protein StpA stimulates self-splicing by promoting RNA assembly in vitro.
A Zhang, V Derbyshire, J L Salvo, M Belfort
RNA. 1995 Oct; 1(8): 783–793.
PMCID:
PMC1369319
SummaryPDF–15M
5.
StpA protein from Escherichia coli condenses supercoiled DNA in preference to linear DNA and protects it from digestion by DNase I and EcoKI
S. A. Keatch, P. G. Leonard, J. E. Ladbury, D. T. F. Dryden
Nucleic Acids Res. 2005; 33(20): 6540–6546. Published online 2005 Nov 18. doi: 10.1093/nar/gki951
PMCID:
PMC1289078
AbstractArticlePDF–278K
6.
Influence of RNA structural stability on the RNA chaperone activity of the Escherichia coli protein StpA
Rupert Grossberger, Oliver Mayer, Christina Waldsich, Katharina Semrad, Sandra Urschitz, Renée Schroeder
Nucleic Acids Res. 2005; 33(7): 2280–2289. Published online 2005 Apr 22. doi: 10.1093/nar/gki515
PMCID:
PMC1084320
AbstractArticlePDF–518K
7.
RNA chaperone StpA loosens interactions of the tertiary structure in the td group I intron in vivo
Christina Waldsich, Rupert Grossberger, Renée Schroeder
Genes Dev. 2002 Sep 1; 16(17): 2300–2312. doi: 10.1101/gad.231302
PMCID:
PMC186668
AbstractArticlePDF–826K
8.
StpA and Hha stimulate pausing by RNA polymerase by promoting DNA–DNA bridging of H-NS filaments
Beth A Boudreau, Daniel R Hron, Liang Qin, Ramon A van der Valk, Matthew V Kotlajich, Remus T Dame, Robert Landick
Nucleic Acids Res. 2018 Jun 20; 46(11): 5525–5546. Published online 2018 Apr 30. doi: 10.1093/nar/gky265
PMCID:
PMC6009659
AbstractArticlePDF–9.9M
9.
Differential Binding Profiles of StpA in Wild-Type and hns Mutant Cells: a Comparative Analysis of Cooperative Partners by Chromatin Immunoprecipitation-Microarray Analysis
Ebru Uyar, Ken Kurokawa, Mika Yoshimura, Shu Ishikawa, Naotake Ogasawara, Taku Oshima
J Bacteriol. 2009 Apr; 191(7): 2388–2391. Published online 2009 Jan 16. doi: 10.1128/JB.01594-08
PMCID:
PMC2655504
AbstractArticlePDF–278K
10.
Differential Dependence of StpA on H-NS in Autoregulation of stpA and in Regulation of bgl
Tinka Wolf, Wiebke Janzen, Corinna Blum, Karin Schnetz
J Bacteriol. 2006 Oct; 188(19): 6728–6738. doi: 10.1128/JB.00586-06
PMCID:
PMC1595503
AbstractArticlePDF–432K
11.
Role of Histone-Like Proteins H-NS and StpA in Expression of Virulence Determinants of Uropathogenic Escherichia coli
Claudia M. Müller, Ulrich Dobrindt, Gábor Nagy, Levente Emödy, Bernt Eric Uhlin, Jörg Hacker
J Bacteriol. 2006 Aug; 188(15): 5428–5438. doi: 10.1128/JB.01956-05
PMCID:
PMC1540026
AbstractArticlePDF–256K
12.
Assaying RNA chaperone activity in vivo using a novel RNA folding trap.
E Clodi, K Semrad, R Schroeder
EMBO J. 1999 Jul 1; 18(13): 3776–3782. doi: 10.1093/emboj/18.13.3776
PMCID:
PMC1171454
SummaryPDF–258K
13.
Escherichia coli protein analogs StpA and H-NS: regulatory loops, similar and disparate effects on nucleic acid dynamics.
A Zhang, S Rimsky, M E Reaban, H Buc, M Belfort
EMBO J. 1996 Mar 15; 15(6): 1340–1349.
PMCID:
PMC450038
SummaryPage BrowsePDF–2.3M
14.
Probing the structure, function, and interactions of the Escherichia coli H-NS and StpA proteins by using dominant negative derivatives.
R M Williams, S Rimsky, H Buc
J Bacteriol. 1996 Aug; 178(15): 4335–4343. doi: 10.1128/jb.178.15.4335-4343.1996
PMCID:
PMC178199
SummaryPDF–307K
15.
Heteromeric Interactions among Nucleoid-Associated Bacterial Proteins: Localization of StpA-Stabilizing Regions in H-NS of Escherichia coli
Jörgen Johansson, Sven Eriksson, Berit Sondén, Sun Nyunt Wai, Bernt Eric Uhlin
J Bacteriol. 2001 Apr; 183(7): 2343–2347. doi: 10.1128/JB.183.7.2343-2347.2001
PMCID:
PMC95143
AbstractArticlePDF–1.1M
16.
RfaH Counter-Silences Inhibition of Transcript Elongation by H-NS–StpA Nucleoprotein Filaments in Pathogenic Escherichiacoli
Christine M. Hustmyer, Michael B. Wolfe, Rodney A. Welch, Robert Landick
mBio. 2022 Nov-Dec; 13(6): e02662-22. Published online 2022 Oct 20. doi: 10.1128/mbio.02662-22
PMCID:
PMC9765446
AbstractArticlePDF–4.9M
17.
The ygaVP Genes of Escherichia coli Form a Tributyltin-Inducible Operon
Hervé Gueuné, Marie-José Durand, Gérald Thouand, Michael S. DuBow
Appl Environ Microbiol. 2008 Mar; 74(6): 1954–1958. Published online 2008 Feb 1. doi: 10.1128/AEM.02294-07
PMCID:
PMC2268312
AbstractArticlePDF–669K
18.
Dissecting RNA chaperone activity
Lukas Rajkowitsch, Renée Schroeder
RNA. 2007 Dec; 13(12): 2053–2060. doi: 10.1261/rna.671807
PMCID:
PMC2080586
AbstractArticlePDF–408K
19.
Nucleotide sequence of a newly-identified Escherichia coli gene, stpA, encoding an H-NS-like protein.
A Zhang, M Belfort
Nucleic Acids Res. 1992 Dec 25; 20(24): 6735. doi: 10.1093/nar/20.24.6735
PMCID:
PMC334595
SummaryPage BrowsePDF–135K
20.
The Escherichia coli stpA gene is transiently expressed during growth in rich medium and is induced in minimal medium and by stress conditions.
A Free, C J Dorman
J Bacteriol. 1997 Feb; 179(3): 909–918. doi: 10.1128/jb.179.3.909-918.1997
PMCID:
PMC178776
SummaryPDF–3.3M

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