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Items: 1 to 20 of 70

1.
Influence of the relA gene on ribosome frameshifting
J. Masucci, J. Gallant, D. Lindsley, J. Atkinson
Mol Genet Genomics. 2002; 268(1): 81–86. Published online 2002 Jul 17. doi: 10.1007/s00438-002-0725-y
PMCID:
PMC7087913
AbstractArticlePDF–119K
2.
The ribosomal A-site finger is crucial for binding and activation of the stringent factor RelA
Pavel Kudrin, Ievgen Dzhygyr, Kensuke Ishiguro, Jelena Beljantseva, Elena Maksimova, Sofia Raquel Alves Oliveira, Vallo Varik, Roshani Payoe, Andrey L Konevega, Tanel Tenson, Tsutomu Suzuki, Vasili Hauryliuk
Nucleic Acids Res. 2018 Feb 28; 46(4): 1973–1983. Published online 2018 Jan 30. doi: 10.1093/nar/gky023
PMCID:
PMC5829649
AbstractArticlePDF–2.3M
3.
The stringent factor RelA adopts an open conformation on the ribosome to stimulate ppGpp synthesis
Stefan Arenz, Maha Abdelshahid, Daniel Sohmen, Roshani Payoe, Agata L. Starosta, Otto Berninghausen, Vasili Hauryliuk, Roland Beckmann, Daniel N. Wilson
Nucleic Acids Res. 2016 Jul 27; 44(13): 6471–6481. Published online 2016 May 25. doi: 10.1093/nar/gkw470
PMCID:
PMC5291266
AbstractArticlePDF–3.7M
4.
Ribosome•RelA structures reveal the mechanism of stringent response activation
Anna B Loveland, Eugene Bah, Rohini Madireddy, Ying Zhang, Axel F Brilot, Nikolaus Grigorieff, Andrei A Korostelev
eLife. 2016; 5: e17029. Published online 2016 Jul 19. doi: 10.7554/eLife.17029
PMCID:
PMC4974054
AbstractArticlePDF–4.9M
5.
Effects of amino acid starvation on RelA diffusive behavior in live Escherichia coli
Wenting Li, Emmanuelle Bouveret, Yan Zhang, Kuanqing Liu, Jue D. Wang, James C. Weisshaar
Mol Microbiol. Author manuscript; available in PMC 2016 Jul 27.
Published in final edited form as: Mol Microbiol. 2016 Feb; 99(3): 571–585. Published online 2015 Nov 10. doi: 10.1111/mmi.13252
PMCID:
PMC4962531
AbstractArticlePDF–2.2M
6.
Positive allosteric feedback regulation of the stringent response enzyme RelA by its product
Viktoriya Shyp, Stoyan Tankov, Andrey Ermakov, Pavel Kudrin, Brian P English, Måns Ehrenberg, Tanel Tenson, Johan Elf, Vasili Hauryliuk
EMBO Rep. 2012 Sep; 13(9): 835–839. Published online 2012 Jul 20. doi: 10.1038/embor.2012.106
PMCID:
PMC3432798
AbstractArticlePDF–507K
7.
Single-molecule investigations of the stringent response machinery in living bacterial cells
Brian P. English, Vasili Hauryliuk, Arash Sanamrad, Stoyan Tankov, Nynke H. Dekker, Johan Elf
Proc Natl Acad Sci U S A. 2011 Aug 2; 108(31): E365-E373. Published online 2011 Jul 5. doi: 10.1073/pnas.1102255108
PMCID:
PMC3150888
AbstractArticlePDF–1.2M
8.
Unbiased Quantitation of Escherichia coli Membrane Proteome Using Phase Transfer Surfactants
Takeshi Masuda, Natsumi Saito, Masaru Tomita, Yasushi Ishihama
Mol Cell Proteomics. 2009 Dec; 8(12): 2770–2777. Published online 2009 Sep 18. doi: 10.1074/mcp.M900240-MCP200
PMCID:
PMC2816013
AbstractArticlePDF–383K
9.
Cell cycle synchronization of E. coli using the stringent response, with fluorescence labeling assays for DNA content and replication
Daniel J. Ferullo, Deani L. Cooper, Hayley R. Moore, Susan T. Lovett
Methods. Author manuscript; available in PMC 2010 May 1.
Published in final edited form as: Methods. 2009 May; 48(1): 8–13. Published online 2009 Feb 24. doi: 10.1016/j.ymeth.2009.02.010
PMCID:
PMC2746677
AbstractArticlePDF–444K
10.
Genetic Analysis of the Invariant Residue G791 in Escherichia coli 16S rRNA Implicates RelA in Ribosome Function
Hong-Man Kim, Sang-Mi Ryou, Woo-Seok Song, Se-Hoon Sim, Chang-Jun Cha, Seung Hyun Han, Nam-Chul Ha, Jae-Hong Kim, Jeehyeon Bae, Philip R. Cunningham, Kangseok Lee
J Bacteriol. 2009 Apr; 191(7): 2042–2050. Published online 2009 Jan 23. doi: 10.1128/JB.00904-08
PMCID:
PMC2655507
AbstractArticlePDF–804K
11.
Transcription Profiling of the Stringent Response in Escherichia coli
Tim Durfee, Anne-Marie Hansen, Huijun Zhi, Frederick R. Blattner, Ding Jun Jin
J Bacteriol. 2008 Feb; 190(3): 1084–1096. Published online 2007 Nov 26. doi: 10.1128/JB.01092-07
PMCID:
PMC2223561
AbstractArticlePDF–798K
12.
Reversibility of the Pyrophosphoryl Transfer from ATP to GTP by Escherichia coli Stringent Factor
Jose Sy
Proc Natl Acad Sci U S A. 1974 Sep; 71(9): 3470–3473. doi: 10.1073/pnas.71.9.3470
PMCID:
PMC433795
SummaryPage BrowsePDF–721K
13.
Nonribosomal Synthesis of Guanosine 5′,3′-Polyphosphates by the Ribosomal Wash of Stringent Escherichia coli
Jose Sy, Yasuo Ogawa, Fritz Lipmann
Proc Natl Acad Sci U S A. 1973 Jul; 70(7): 2145–2148. doi: 10.1073/pnas.70.7.2145
PMCID:
PMC433684
SummaryPage BrowsePDF–583K
14.
Synthesis of Guanosine Tetra- and Pentaphosphate Requires the Presence of a Codon-Specific, Uncharged Transfer Ribonucleic Acid in the Acceptor Site of Ribosomes
William A. Haseltine, Ricardo Block
Proc Natl Acad Sci U S A. 1973 May; 70(5): 1564–1568. doi: 10.1073/pnas.70.5.1564
PMCID:
PMC433543
SummaryPage BrowsePDF–982K
15.
Identification of the Synthesis of Guanosine Tetraphosphate (MS I) as Insertion of a Pyrophosphoryl Group into the 3′-Position in Guanosine 5′-Diphosphate
Jose Sy, Fritz Lipmann
Proc Natl Acad Sci U S A. 1973 Feb; 70(2): 306–309. doi: 10.1073/pnas.70.2.306
PMCID:
PMC433245
SummaryPage BrowsePDF–748K
16.
Isolation of "relaxed" mutants of Escherichia coli.
N Fiil, J D Friesen
J Bacteriol. 1968 Feb; 95(2): 729–731. doi: 10.1128/jb.95.2.729-731.1968
PMCID:
PMC252079
SummaryPage BrowsePDF–321K
17.
Effect of the relA gene on derepression of amino acid biosynthetic enzymes in growing Escherichia coli depends on the pathway being derepressed.
A V Furano, F P Wittel
J Bacteriol. 1977 Oct; 132(1): 352–355. doi: 10.1128/jb.132.1.352-355.1977
PMCID:
PMC221864
SummaryPage BrowsePDF–618K
18.
Regulation of Escherichia coli RelA Requires Oligomerization of the C-Terminal Domain
Michal Gropp, Yael Strausz, Miriam Gross, Gad Glaser
J Bacteriol. 2001 Jan; 183(2): 570–579. doi: 10.1128/JB.183.2.570-579.2001
PMCID:
PMC94912
AbstractArticlePDF–1.7M
19.
RNA binding of Hfq monomers promotes RelA-mediated hexamerization in a limiting Hfq environment
Pallabi Basu, Maya Elgrably-Weiss, Fouad Hassouna, Manoj Kumar, Reuven Wiener, Shoshy Altuvia
Nat Commun. 2021; 12: 2249. Published online 2021 Apr 21. doi: 10.1038/s41467-021-22553-x
PMCID:
PMC8060364
AbstractArticlePDF–2.6M
20.
Nitrogen Starvation Induces Persister Cell Formation in Escherichia coli
Daniel R. Brown
J Bacteriol. 2019 Feb 1; 201(3): e00622-18. Prepublished online 2018 Nov 12. Published online 2019 Jan 11. doi: 10.1128/JB.00622-18
PMCID:
PMC6349093
AbstractArticlePDF–407K

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