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Items: 1 to 20 of 49

1.
Structural basis of three different transcription activation strategies adopted by a single regulator SoxS
Jing Shi, Lu Wang, Aijia Wen, Fulin Wang, Yuqiong Zhang, Libing Yu, Fangfang Li, Yuanling Jin, Zhenzhen Feng, Jiacong Li, Yujiao Yang, Fei Gao, Yu Zhang, Yu Feng, Shuang Wang, Wei Zhao, Wei Lin
Nucleic Acids Res. 2022 Oct 28; 50(19): 11359–11373. Published online 2022 Oct 16. doi: 10.1093/nar/gkac898
PMCID:
PMC9638938
AbstractArticlePDF–5.5M
2.
Genetic Evidence for a Novel Interaction Between Transcriptional Activator SoxS and Region 4 of the σ70 Subunit of RNA Polymerase at Class II SoxS-dependent Promoters in Escherichia coli
M. Ammar Zafar, Neus Sanchez-Alberola, Richard E. Wolf, Jr.
J Mol Biol. Author manuscript; available in PMC 2012 Apr 1.
Published in final edited form as: J Mol Biol. 2011 Apr 1; 407(3): 333–353. Published online 2010 Dec 31. doi: 10.1016/j.jmb.2010.12.037
PMCID:
PMC3070153
AbstractArticlePDF–1.3M
3.
Protein-Protein Interactions Between σ70 Region 4 of RNA Polymerase and Escherichia coli SoxS, a Transcription Activator that Functions by the Pre-recruitment Mechanism: Evidence for “Off-DNA” and “On-DNA” Interactions
M. Ammar Zafar, Ishita M. Shah, Richard E. Wolf, Jr.
J Mol Biol. Author manuscript; available in PMC 2011 Aug 6.
Published in final edited form as: J Mol Biol. 2010 Aug 6; 401(1): 13–32. Published online 2010 Jun 2. doi: 10.1016/j.jmb.2010.05.052
PMCID:
PMC2917807
AbstractArticlePDF–1.2M
4.
Two functions of the C-terminal domain of Escherichia coli Rob: mediating “sequestration-dispersal” as a novel off-on switch for regulating Rob’s activity as a transcription activator and preventing degradation of Rob by Lon protease
Kevin L. Griffith, M. Megan Fitzpatrick, Edward F. Keen, III, Richard E. Wolf, Jr.
J Mol Biol. Author manuscript; available in PMC 2010 May 8.
Published in final edited form as: J Mol Biol. 2009 May 8; 388(3): 415–430. Published online 2009 Mar 14. doi: 10.1016/j.jmb.2009.03.023
PMCID:
PMC2728042
AbstractArticlePDF–1000K
5.
Rapid Changes in Gene Expression Dynamics in Response to Superoxide Reveal SoxRS-Dependent and Independent Transcriptional Networks
Jeffrey L. Blanchard, Wei-Yun Wholey, Erin M. Conlon, Pablo J. Pomposiello
PLoS One. 2007; 2(11): e1186. Published online 2007 Nov 14. doi: 10.1371/journal.pone.0001186
Correction in:
PLoS One. 2012; 7(11): 10.1371/annotation/5cba04eb-5172-43a7-ad92-10efcd3858c9.
PMCID:
PMC2064960
AbstractArticlePDF–673K
6.
Molecular characterization of the soxRS genes of Escherichia coli: two genes control a superoxide stress regulon.
C F Amábile-Cuevas, B Demple
Nucleic Acids Res. 1991 Aug 25; 19(16): 4479–4484. doi: 10.1093/nar/19.16.4479
PMCID:
PMC328637
SummaryPage BrowsePDF–1.3M
7.
Isolation of gene fusions (soi::lacZ) inducible by oxidative stress in Escherichia coli.
T Kogoma, S B Farr, K M Joyce, D O Natvig
Proc Natl Acad Sci U S A. 1988 Jul; 85(13): 4799–4803. doi: 10.1073/pnas.85.13.4799
PMCID:
PMC280523
SummaryPage BrowsePDF–977K
8.
Two divergently transcribed genes, soxR and soxS, control a superoxide response regulon of Escherichia coli.
J Wu, B Weiss
J Bacteriol. 1991 May; 173(9): 2864–2871. doi: 10.1128/jb.173.9.2864-2871.1991
PMCID:
PMC207867
SummaryPage BrowsePDF–1.6M
9.
Negative autoregulation by the Escherichia coli SoxS protein: a dampening mechanism for the soxRS redox stress response.
T Nunoshiba, E Hidalgo, Z Li, B Demple
J Bacteriol. 1993 Nov; 175(22): 7492–7494. doi: 10.1128/jb.175.22.7492-7494.1993
PMCID:
PMC206898
SummaryPage BrowsePDF–605K
10.
Isolation and characterization of Escherichia coli strains containing new gene fusions (soi::lacZ) inducible by superoxide radicals.
S Mito, Q M Zhang, S Yonei
J Bacteriol. 1993 May; 175(9): 2645–2651. doi: 10.1128/jb.175.9.2645-2651.1993
PMCID:
PMC204567
SummaryPage BrowsePDF–1.1M
11.
Genetic definition of the Escherichia coli zwf "soxbox," the DNA binding site for SoxS-mediated induction of glucose 6-phosphate dehydrogenase in response to superoxide.
W P Fawcett, R E Wolf, Jr
J Bacteriol. 1995 Apr; 177(7): 1742–1750. doi: 10.1128/jb.177.7.1742-1750.1995
PMCID:
PMC176801
SummaryPDF–276K
12.
Overexpression of the robA gene increases organic solvent tolerance and multiple antibiotic and heavy metal ion resistance in Escherichia coli.
H Nakajima, K Kobayashi, M Kobayashi, H Asako, R Aono
Appl Environ Microbiol. 1995 Jun; 61(6): 2302–2307. doi: 10.1128/aem.61.6.2302-2307.1995
PMCID:
PMC167502
SummaryPDF–562K
13.
SoxR, a [2Fe-2S] transcription factor, is active only in its oxidized form.
P Gaudu, B Weiss
Proc Natl Acad Sci U S A. 1996 Sep 17; 93(19): 10094–10098. doi: 10.1073/pnas.93.19.10094
PMCID:
PMC38342
SummaryPage BrowsePDF–1.3M
14.
Superoxide-Mediated Protection of Escherichia coli from Antimicrobials
Michael Mosel, Liping Li, Karl Drlica, Xilin Zhao
Antimicrob Agents Chemother. 2013 Nov; 57(11): 5755–5759. doi: 10.1128/AAC.00754-13
PMCID:
PMC3811261
AbstractArticlePDF–1011K
15.
SoxS Increases the Expression of the Zinc Uptake System ZnuACB in an Escherichia coli Murine Pyelonephritis Model
Douglas M. Warner, Stuart B. Levy
J Bacteriol. 2012 Mar; 194(5): 1177–1185. doi: 10.1128/JB.05451-11
PMCID:
PMC3294818
AbstractArticlePDF–938K
16.
Activation of the E. coli marA/soxS/rob regulon in response to transcriptional activator concentration
Robert G. Martin, Emily S. Bartlett, Judah L. Rosner, Michael E. Wall
J Mol Biol. Author manuscript; available in PMC 2009 Jan 7.
Published in final edited form as: J Mol Biol. 2008 Jul 4; 380(2): 278–284. Published online 2008 May 13. doi: 10.1016/j.jmb.2008.05.015
PMCID:
PMC2614912
AbstractArticlePDF–293K
17.
Genome-Wide Transcriptional Responses of Escherichia coli K-12 to Continuous Osmotic and Heat Stresses
Thusitha S. Gunasekera, Laszlo N. Csonka, Oleg Paliy
J Bacteriol. 2008 May; 190(10): 3712–3720. Published online 2008 Mar 21. doi: 10.1128/JB.01990-07
PMCID:
PMC2395010
AbstractArticlePDF–360K
18.
Medium Plays a Role in Determining Expression of acrB, marA, and soxS in Escherichia coli
Andrew M. Bailey, Mark A. Webber, Laura J. V. Piddock
Antimicrob Agents Chemother. 2006 Mar; 50(3): 1071–1074. doi: 10.1128/AAC.50.3.1071-1074.2006
PMCID:
PMC1426439
AbstractArticlePDF–69K
19.
Two-stage control of an oxidative stress regulon: the Escherichia coli SoxR protein triggers redox-inducible expression of the soxS regulatory gene.
T Nunoshiba, E Hidalgo, C F Amábile Cuevas, B Demple
J Bacteriol. 1992 Oct; 174(19): 6054–6060. doi: 10.1128/jb.174.19.6054-6060.1992
PMCID:
PMC207670
SummaryPage BrowsePDF–1.5M
20.
Two-stage induction of the soxRS (superoxide response) regulon of Escherichia coli.
J Wu, B Weiss
J Bacteriol. 1992 Jun; 174(12): 3915–3920. doi: 10.1128/jb.174.12.3915-3920.1992
PMCID:
PMC206099
SummaryPage BrowsePDF–1.1M

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