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Items: 1 to 20 of 33

1.
Draft Genome Sequence of Agrobacterium tumefaciens Strain 1D1526
Naxin Huo, Yong Gu, Kent F. McCue, Diaa Alabed, James G. Thomson
Microbiol Resour Announc. 2019 Nov; 8(45): e01084-19. Published online 2019 Nov 7. doi: 10.1128/MRA.01084-19
PMCID:
PMC6838621
AbstractArticlePDF–125K
2.
Complete Genome Sequence of Agrobacterium fabrum Strain 1D159
Naxin Huo, Yong Gu, Kent F. McCue, Diaa Alabed, James G. Thomson
Microbiol Resour Announc. 2019 May; 8(19): e00207-19. Published online 2019 May 9. doi: 10.1128/MRA.00207-19
PMCID:
PMC6509523
AbstractArticlePDF–383K
3.
RepB C-terminus mutation of a pRi-repABC binary vector affects plasmid copy number in Agrobacterium and transgene copy number in plants
Zarir Vaghchhipawala, Sharon Radke, Ervin Nagy, Mary L. Russell, Susan Johnson, Stanton B. Gelvin, Larry A. Gilbertson, Xudong Ye
PLoS One. 2018; 13(11): e0200972. Published online 2018 Nov 9. doi: 10.1371/journal.pone.0200972
PMCID:
PMC6226153
AbstractArticlePDF–1.9M
4.
Genome-wide identification and characterization of small RNAs in Rhodobacter capsulatus and identification of small RNAs affected by loss of the response regulator CtrA
Marc P. Grüll, Lourdes Peña-Castillo, Martin E. Mulligan, Andrew S. Lang
RNA Biol. 2017; 14(7): 914–925. Published online 2017 Mar 15. doi: 10.1080/15476286.2017.1306175
PMCID:
PMC5546546
AbstractArticlePDF–1.2M
5.
Community Analysis and Recovery of Phenol-degrading Bacteria from Drinking Water Biofilters
Qihui Gu, Qingping Wu, Jumei Zhang, Weipeng Guo, Huiqing Wu, Ming Sun
Front Microbiol. 2016; 7: 495. Published online 2016 Apr 12. doi: 10.3389/fmicb.2016.00495
PMCID:
PMC4828441
AbstractArticlePDF–805K
6.
A Stress-Induced Small RNA Modulates Alpha-Rhizobial Cell Cycle Progression
Marta Robledo, Benjamin Frage, Patrick R. Wright, Anke Becker
PLoS Genet. 2015 Apr; 11(4): e1005153. Published online 2015 Apr 29. doi: 10.1371/journal.pgen.1005153
PMCID:
PMC4414408
AbstractArticlePDF–1.0M
7.
A simple method for semi-random DNA amplicon fragmentation using the methylation-dependent restriction enzyme MspJI
Hiroshi Shinozuka, Noel O I Cogan, Maiko Shinozuka, Alexis Marshall, Pippa Kay, Yi-Han Lin, German C Spangenberg, John W Forster
BMC Biotechnol. 2015; 15: 25. Published online 2015 Apr 11. doi: 10.1186/s12896-015-0139-7
PMCID:
PMC4396059
AbstractArticlePDF–3.5M
8.
Whole-Genome Analysis of Herbicide-Tolerant Mutant Rice Generated by Agrobacterium-Mediated Gene Targeting
Masaki Endo, Masahiko Kumagai, Ritsuko Motoyama, Harumi Sasaki-Yamagata, Satomi Mori-Hosokawa, Masao Hamada, Hiroyuki Kanamori, Yoshiaki Nagamura, Yuichi Katayose, Takeshi Itoh, Seiichi Toki
Plant Cell Physiol. 2015 Jan; 56(1): 116–125. Published online 2014 Nov 4. doi: 10.1093/pcp/pcu153
PMCID:
PMC4301741
AbstractArticlePDF–645K
9.
A Genome-Wide Survey of Highly Expressed Non-Coding RNAs and Biological Validation of Selected Candidates in Agrobacterium tumefaciens
Keunsub Lee, Xiaoqiu Huang, Chichun Yang, Danny Lee, Vincent Ho, Kan Nobuta, Jian-Bing Fan, Kan Wang
PLoS One. 2013; 8(8): e70720. Published online 2013 Aug 8. doi: 10.1371/journal.pone.0070720
PMCID:
PMC3738593
AbstractArticlePDF–1.8M
10.
Profligate Biotin Synthesis in α-Proteobacteria – A Developing or Degenerating Regulatory System?
Youjun Feng, Huimin Zhang, John E. Cronan
Mol Microbiol. Author manuscript; available in PMC 2014 Apr 1.
Published in final edited form as: Mol Microbiol. 2013 Apr; 88(1): 77–92. Published online 2013 Mar 12. doi: 10.1111/mmi.12170
PMCID:
PMC3608792
AbstractArticlePDF–3.0M
11.
Reconciliation of Sequence Data and Updated Annotation of the Genome of Agrobacterium tumefaciens C58, and Distribution of a Linear Chromosome in the Genus Agrobacterium
Steven Slater, João C. Setubal, Brad Goodner, Kathryn Houmiel, Jian Sun, Rajinder Kaul, Barry S. Goldman, Stephen K. Farrand, Nalvo Almeida, Jr., Thomas Burr, Eugene Nester, David M. Rhoads, Ryosuke Kadoi, Trucian Ostheimer, Nicole Pride, Allison Sabo, Erin Henry, Erin Telepak, Lindsey Cromes, Alana Harkleroad, Louis Oliphant, Phil Pratt-Szegila, Roy Welch, Derek Wood
Appl Environ Microbiol. 2013 Feb; 79(4): 1414–1417. doi: 10.1128/AEM.03192-12
PMCID:
PMC3568625
AbstractArticlePDF–493K
12.
An Enzyme-Catalyzed Multistep DNA Refolding Mechanism in Hairpin Telomere Formation
Ke Shi, Wai Mun Huang, Hideki Aihara
PLoS Biol. 2013 Jan; 11(1): e1001472. Published online 2013 Jan 29. doi: 10.1371/journal.pbio.1001472
PMCID:
PMC3558466
AbstractArticlePDF–1.6M
13.
Draft Genome Sequence of Agrobacterium albertimagni Strain AOL15
William L. Trimble, Le T. Phung, Folker Meyer, Jack A. Gilbert, Simon Silver
J Bacteriol. 2012 Dec; 194(24): 6986–6987. doi: 10.1128/JB.01912-12
PMCID:
PMC3510623
AbstractArticlePDF–96K
14.
A bacterial sulfonolipid triggers multicellular development in the closest living relatives of animals
Rosanna A Alegado, Laura W Brown, Shugeng Cao, Renee K Dermenjian, Richard Zuzow, Stephen R Fairclough, Jon Clardy, Nicole King
eLife. 2012; 1: e00013. Published online 2012 Oct 15. doi: 10.7554/eLife.00013
PMCID:
PMC3463246
AbstractArticlePDF–1.3M
15.
Theoretical Prediction and Experimental Verification of Protein-Coding Genes in Plant Pathogen Genome Agrobacterium tumefaciens Strain C58
Qian Wang, Yang Lei, Xiwen Xu, Gejiao Wang, Ling-Ling Chen
PLoS One. 2012; 7(9): e43176. Published online 2012 Sep 11. doi: 10.1371/journal.pone.0043176
PMCID:
PMC3439454
AbstractArticlePDF–1.3M
16.
Cloning, expression, purification and crystallization of dihydrodipicolinate synthase from Agrobacterium tumefaciens
Sarah C. Atkinson, Con Dogovski, Renwick C. J. Dobson, Matthew A. Perugini
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Sep 1; 68(Pt 9): 1040–1047. Published online 2012 Aug 30. doi: 10.1107/S1744309112033052
PMCID:
PMC3433193
AbstractArticlePDF–1.9M
17.
Linear Chromosome-generating System of Agrobacterium tumefaciens C58: PROTELOMERASE GENERATES AND PROTECTS HAIRPIN ENDS
Wai Mun Huang, Jeanne DaGloria, Heather Fox, Qiurong Ruan, John Tillou, Ke Shi, Hideki Aihara, John Aron, Sherwood Casjens
J Biol Chem. 2012 Jul 20; 287(30): 25551–25563. Published online 2012 May 10. doi: 10.1074/jbc.M112.369488
PMCID:
PMC3408200
AbstractArticlePDF–1.9M
18.
Deep sequencing uncovers numerous small RNAs on all four replicons of the plant pathogen Agrobacterium tumefaciens
Ina Wilms, Aaron Overlöper, Minou Nowrousian, Cynthia M. Sharma, Franz Narberhaus
RNA Biol. 2012 Apr 1; 9(4): 446–457. doi: 10.4161/rna.17212
PMCID:
PMC3384568
AbstractArticlePDF–1.6M
19.
An archived activation tagged population of Arabidopsis thaliana to facilitate forward genetics approaches
Stephen J Robinson, Lily H Tang, Brent AG Mooney, Sheldon J McKay, Wayne E Clarke, Matthew G Links, Steven Karcz, Sharon Regan, Yun-Yun Wu, Margaret Y Gruber, Dejun Cui, Min Yu, Isobel AP Parkin
BMC Plant Biol. 2009; 9: 101. Published online 2009 Jul 31. doi: 10.1186/1471-2229-9-101
PMCID:
PMC3091532
AbstractArticlePDF–1.7M
20.
Crystal Structure of Exotype Alginate Lyase Atu3025 from Agrobacterium tumefaciens
Akihito Ochiai, Masayuki Yamasaki, Bunzo Mikami, Wataru Hashimoto, Kousaku Murata
J Biol Chem. 2010 Aug 6; 285(32): 24519–24528. Published online 2010 May 27. doi: 10.1074/jbc.M110.125450
PMCID:
PMC2915688
AbstractArticlePDF–3.0M

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