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Select item 68997411.

Genome‐resolved metagenomics and metatranscriptomics reveal niche differentiation in functionally redundant microbial communities at deep‐sea hydrothermal vents

David Galambos, Rika E. Anderson, Julie Reveillaud, Julie A. Huber

Environ Microbiol. 2019 Nov; 21(11): 4395–4410. Published online 2019 Oct 17. doi: 10.1111/1462-2920.14806

PMCID:: PMC6899741

Abstract Article PDF–1.5M

Select item 68416552.

CNN-MGP: Convolutional Neural Networks for Metagenomics Gene Prediction

Amani Al-Ajlan, Achraf El Allali

Interdiscip Sci. 2019; 11(4): 628–635. Published online 2018 Dec 27. doi: 10.1007/s12539-018-0313-4

PMCID:: PMC6841655

Abstract Article PDF–1.1M

Select item 68073813.

An analysis of the IS6/IS26 family of insertion sequences: is it a single family?

Christopher J. Harmer, Ruth M. Hall

Microb Genom. 2019 Sep; 5(9): e000291. Published online 2019 Sep 5. doi: 10.1099/mgen.0.000291

PMCID:: PMC6807381

Abstract Article PDF–14M

Select item 66171414.

Emergence of a “Cyclosome” in a Primitive Network Capable of Building “Infinite” Proteins

Jacques Demongeot, Vic Norris

Life (Basel) 2019 Jun; 9(2): 51. Published online 2019 Jun 18. doi: 10.3390/life9020051

PMCID:: PMC6617141

Abstract Article PDF–5.1M

Select item 66161135.

A Genetic System for Methanocaldococcus jannaschii: An Evolutionary Deeply Rooted Hyperthermophilic Methanarchaeon

Dwi Susanti, Mary C. Frazier, Biswarup Mukhopadhyay

Front Microbiol. 2019; 10: 1256. Published online 2019 Jul 3. doi: 10.3389/fmicb.2019.01256

Correction in:: Front Microbiol. 2021; 12: 649127.

PMCID:: PMC6616113

Abstract Article PDF–5.8M

Select item 60473686.

Feature selection for gene prediction in metagenomic fragments

Amani Al-Ajlan, Achraf El Allali

BioData Min. 2018; 11: 9. Published online 2018 Jun 7. doi: 10.1186/s13040-018-0170-z

PMCID:: PMC6047368

Abstract Article PDF–781K

Select item 54280637.

Weaning age influences the severity of gastrointestinal microbiome shifts in dairy calves

S. J. Meale, S. C. Li, P. Azevedo, H. Derakhshani, T. J. DeVries, J. C. Plaizier, M. A. Steele, E. Khafipour

Sci Rep. 2017; 7: 198. Published online 2017 Mar 15. doi: 10.1038/s41598-017-00223-7

PMCID:: PMC5428063

Abstract Article PDF–5.2M

Select item 53122428.

Phosphoribosyl Diphosphate (PRPP): Biosynthesis, Enzymology, Utilization, and Metabolic Significance

Bjarne Hove-Jensen, Kasper R. Andersen, Mogens Kilstrup, Jan Martinussen, Robert L. Switzer, Martin Willemoës

Microbiol Mol Biol Rev. 2017 Mar; 81(1): e00040-16. Published online 2016 Dec 28. doi: 10.1128/MMBR.00040-16

PMCID:: PMC5312242

Abstract Article PDF–8.7M

Select item 50542229.

A Method for Identification of Selenoprotein Genes in Archaeal Genomes

Mingfeng Li, Yanzhao Huang, Yi Xiao

Genomics Proteomics Bioinformatics. 2009 Jun; 7(1-2): 62–70. Published online 2009 Jul 8. doi: 10.1016/S1672-0229(08)60034-0

PMCID:: PMC5054222

Abstract Article PDF–759K

Select item 502554010.

High Frequency of Thermodesulfovibrio spp. and Anaerolineaceae in Association with Methanoculleus spp. in a Long-Term Incubation of n-Alkanes-Degrading Methanogenic Enrichment Culture

Bo Liang, Li-Ying Wang, Zhichao Zhou, Serge M. Mbadinga, Lei Zhou, Jin-Feng Liu, Shi-Zhong Yang, Ji-Dong Gu, Bo-Zhong Mu

Front Microbiol. 2016; 7: 1431. Published online 2016 Sep 16. doi: 10.3389/fmicb.2016.01431

PMCID:: PMC5025540

Abstract Article PDF–3.8M

Select item 485364511.

Development of Ruminal and Fecal Microbiomes Are Affected by Weaning But Not Weaning Strategy in Dairy Calves

Sarah J. Meale, Shucong Li, Paula Azevedo, Hooman Derakhshani, Jan C. Plaizier, Ehsan Khafipour, Michael A. Steele

Front Microbiol. 2016; 7: 582. Published online 2016 May 3. doi: 10.3389/fmicb.2016.00582

PMCID:: PMC4853645

Abstract Article PDF–1.8M

Select item 482769412.

Evaluation of microbial qPCR workflows using engineered Saccharomyces cerevisiae

S.M. Da Silva, L.K. Vang, N.D. Olson, S.P. Lund, A.S. Downey, Z. Kelman, M.L. Salit, N.J. Lin, J.B. Morrow

Biomol Detect Quantif. 2016 Mar; 7: 27–33. Published online 2016 Feb 19. doi: 10.1016/j.bdq.2016.01.001

PMCID:: PMC4827694

Abstract Article PDF–888K

Select item 446959713.

Anaerolineaceae and Methanosaeta turned to be the dominant microorganisms in alkanes-dependent methanogenic culture after long-term of incubation

Bo Liang, Li-Ying Wang, Serge Maurice Mbadinga, Jin-Feng Liu, Shi-Zhong Yang, Ji-Dong Gu, Bo-Zhong Mu

AMB Express. 2015; 5: 37. Published online 2015 Jun 18. doi: 10.1186/s13568-015-0117-4

PMCID:: PMC4469597

Abstract Article PDF–3.7M

Select item 439088714.

Phylogeny and Taxonomy of Archaea: A Comparison of the Whole-Genome-Based CVTree Approach with 16S rRNA Sequence Analysis

Guanghong Zuo, Zhao Xu, Bailin Hao

Life (Basel) 2015 Mar; 5(1): 949–968. Published online 2015 Mar 17. doi: 10.3390/life5010949

PMCID:: PMC4390887

Abstract Article PDF–1019K

Select item 430970115.

Diversity of Methane-Cycling Archaea in Hydrothermal Sediment Investigated by General and Group-Specific PCR Primers

Mark A. Lever, Andreas P. Teske

Appl Environ Microbiol. 2015 Feb; 81(4): 1426–1441. Prepublished online 2014 Dec 19. Published online 2015 Jan 30. doi: 10.1128/AEM.03588-14

PMCID:: PMC4309701

Abstract Article PDF–2.2M

Select item 394116416.

Comparative Analysis of the Methanogen Diversity in Horse and Pony by Using mcrA Gene and Archaeal 16S rRNA Gene Clone Libraries

Khin-Ohnmar Lwin, Hiroki Matsui

Archaea. 2014; 2014: 483574. Published online 2014 Jan 30. doi: 10.1155/2014/483574

PMCID:: PMC3941164

Abstract Article PDF–734K

Select item 390631317.

Expression of antibodies using single open reading frame (sORF) vector design: Demonstration of manufacturing feasibility

Wendy R. Gion, Rachel A. Davis-Taber, Dean A. Regier, Emma Fung, Limary Medina, Ling C. Santora, Sahana Bose, Alexander V. Ivanov, Barbara A. Perilli-Palmer, Chris M. Chumsae, Joseph G. Matuck, Yune Z. Kunes, Gerald R. Carson

MAbs. 2013 Jul 1; 5(4): 595–607. Published online 2013 May 31. doi: 10.4161/mabs.25161

PMCID:: PMC3906313

Abstract Article PDF–3.6M

Select item 381901218.

Molecular characterization of activated sludge from a seawater‐processing wastewater treatment plant

Olga Sánchez, Laura Garrido, Irene Forn, Ramon Massana, Manuel Ignacio Maldonado, Jordi Mas

Microb Biotechnol. 2011 Sep; 4(5): 628–642. Published online 2011 Aug 17. doi: 10.1111/j.1751-7915.2011.00256.x

PMCID:: PMC3819012

Abstract Article PDF–453K

Select item 369193519.

Periodic Distribution of a Putative Nucleosome Positioning Motif in Human, Nonhuman Primates, and Archaea: Mutual Information Analysis

Daniela Sosa, Pedro Miramontes, Wentian Li, Víctor Mireles, Juan R. Bobadilla, Marco V. José

Int J Genomics. 2013; 2013: 963956. Published online 2013 Jun 10. doi: 10.1155/2013/963956

PMCID:: PMC3691935

Abstract Article PDF–3.3M

Select item 352648420.

Athenia L. Oldham, Kathleen E. Duncan

PLoS One. 2012; 7(12): e51931. Published online 2012 Dec 19. doi: 10.1371/journal.pone.0051931

PMCID:: PMC3526484

Abstract Article PDF–424K

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