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Select item 69540211.

The CDK Pef1 and protein phosphatase 4 oppose each other for regulating cohesin binding to fission yeast chromosomes

Adrien Birot, Marta Tormos-Pérez, Sabine Vaur, Amélie Feytout, Julien Jaegy, Dácil Alonso Gil, Stéphanie Vazquez, Karl Ekwall, Jean-Paul Javerzat

eLife. 2020; 9: e50556. Published online 2020 Jan 2. doi: 10.7554/eLife.50556

PMCID:: PMC6954021

Abstract Article PDF–1.5M

Select item 62754602.

Sequana coverage: detection and characterization of genomic variations using running median and mixture models

Dimitri Desvillechabrol, Christiane Bouchier, Sean Kennedy, Thomas Cokelaer

Gigascience. 2018 Dec; 7(12): giy110. Published online 2018 Sep 6. doi: 10.1093/gigascience/giy110

PMCID:: PMC6275460

Abstract Article PDF–2.6M

Select item 61685683.

Assembly of Schizosaccharomyces cryophilus chromosomes and their comparative genomic analyses revealed principles of genome evolution of the haploid fission yeasts

Lajos Ács-Szabó, László Attila Papp, Zsuzsa Antunovics, Matthias Sipiczki, Ida Miklós

Sci Rep. 2018; 8: 14629. Published online 2018 Oct 2. doi: 10.1038/s41598-018-32525-9

PMCID:: PMC6168568

Abstract Article PDF–2.9M

Select item 60979394.

Pericentromere-specific cohesin complex prevents meiotic pericentric DNA double-strand breaks and lethal crossovers

Mridula Nambiar, Gerald R. Smith

Mol Cell. Author manuscript; available in PMC 2019 Aug 16.

Published in final edited form as: Mol Cell. 2018 Aug 16; 71(4): 540–553.e4. Published online 2018 Aug 2. doi: 10.1016/j.molcel.2018.06.035

PMCID:: PMC6097939

Abstract Article PDF–981K

Select item 57540895.

A Kolmogorov-Smirnov test for the molecular clock based on Bayesian ensembles of phylogenies

Fernando Antoneli, Fernando M. Passos, Luciano R. Lopes, Marcelo R. S. Briones

PLoS One. 2018; 13(1): e0190826. Published online 2018 Jan 4. doi: 10.1371/journal.pone.0190826

Correction in:: PLoS One. 2018; 13(2): e0193633.

PMCID:: PMC5754089

Abstract Article PDF–2.4M

Select item 53321586.

An aging-independent replicative lifespan in a symmetrically dividing eukaryote

Eric C Spivey, Stephen K Jones, Jr, James R Rybarski, Fatema A Saifuddin, Ilya J Finkelstein

eLife. 2017; 6: e20340. Published online 2017 Jan 31. doi: 10.7554/eLife.20340

PMCID:: PMC5332158

Abstract Article PDF–1.5M

Select item 52930767.

Establishment of expression-state boundaries by Rif1 and Taz1 in fission yeast

Tea Toteva, Bethany Mason, Yutaka Kanoh, Peter Brøgger, Daniel Green, Janne Verhein-Hansen, Hisao Masai, Geneviève Thon

Proc Natl Acad Sci U S A. 2017 Jan 31; 114(5): 1093–1098. Published online 2017 Jan 17. doi: 10.1073/pnas.1614837114

PMCID:: PMC5293076

Abstract Article PDF–1.1M

Select item 50633828.

Scarless Gene Tagging with One-Step Transformation and Two-Step Selection in Saccharomyces cerevisiae and Schizosaccharomyces pombe

Dirk Landgraf, Dann Huh, Erinc Hallacli, Susan Lindquist

PLoS One. 2016; 11(10): e0163950. Published online 2016 Oct 13. doi: 10.1371/journal.pone.0163950

PMCID:: PMC5063382

Abstract Article PDF–4.1M

Select item 47687949.

Evaluating the control of mRNA decay in fission yeast

Brandon J. Cuthbertson, Perry J. Blackshear

Methods Enzymol. Author manuscript; available in PMC 2016 Feb 26.

Published in final edited form as: Methods Enzymol. 2008; 449: 73–95. doi: 10.1016/S0076-6879(08)02404-X

PMCID:: PMC4768794

Abstract Article PDF–2.2M

Select item 467490010.

How genome complexity can explain the difficulty of aligning reads to genomes

Vinhthuy Phan, Shanshan Gao, Quang Tran, Nam S Vo

BMC Bioinformatics. 2015; 16(Suppl 17): S3. Published online 2015 Dec 7. doi: 10.1186/1471-2105-16-S17-S3

PMCID:: PMC4674900

Abstract Article PDF–2.1M

Select item 464770911.

misFinder: identify mis-assemblies in an unbiased manner using reference and paired-end reads

Xiao Zhu, Henry C. M. Leung, Rongjie Wang, Francis Y. L. Chin, Siu Ming Yiu, Guangri Quan, Yajie Li, Rui Zhang, Qinghua Jiang, Bo Liu, Yucui Dong, Guohui Zhou, Yadong Wang

BMC Bioinformatics. 2015; 16: 386. Published online 2015 Nov 16. doi: 10.1186/s12859-015-0818-3

PMCID:: PMC4647709

Abstract Article PDF–1.6M

Select item 462458512.

Engineering an efficient and tight d-amino acid-inducible gene expression system in Rhodosporidium/Rhodotorula species

Yanbin Liu, Chong Mei John Koh, Si Te Ngoh, Lianghui Ji

Microb Cell Fact. 2015; 14: 170. Published online 2015 Oct 26. doi: 10.1186/s12934-015-0357-7

Correction in:: Microb Cell Fact. 2017; 16: 107.

PMCID:: PMC4624585

Abstract Article PDF–4.8M

Select item 438150613.

Genetic basis of the highly efficient yeast Kluyveromyces marxianus: complete genome sequence and transcriptome analyses

Noppon Lertwattanasakul, Tomoyuki Kosaka, Akira Hosoyama, Yutaka Suzuki, Nadchanok Rodrussamee, Minenosuke Matsutani, Masayuki Murata, Naoko Fujimoto, Suprayogi, Keiko Tsuchikane, Savitree Limtong, Nobuyuki Fujita, Mamoru Yamada

Biotechnol Biofuels. 2015; 8: 47. Published online 2015 Mar 18. doi: 10.1186/s13068-015-0227-x

PMCID:: PMC4381506

Abstract Article PDF–1.3M

Select item 431293614.

Moniliellomycetes and Malasseziomycetes, two new classes in Ustilaginomycotina

Q.-M. Wang, B. Theelen, M. Groenewald, F.-Y. Bai, T. Boekhout

Persoonia. 2014 Dec; 33: 41–47. Published online 2014 May 23. doi: 10.3767/003158514X682313

PMCID:: PMC4312936

Abstract Article PDF–309K

Select item 425210415.

PERGA: A Paired-End Read Guided De Novo Assembler for Extending Contigs Using SVM and Look Ahead Approach

Xiao Zhu, Henry C. M. Leung, Francis Y. L. Chin, Siu Ming Yiu, Guangri Quan, Bo Liu, Yadong Wang

PLoS One. 2014; 9(12): e114253. Published online 2014 Dec 2. doi: 10.1371/journal.pone.0114253

PMCID:: PMC4252104

Abstract Article PDF–584K

Select item 373496416.

Examining new phylogenetic markers to uncover the evolutionary history of early-diverging fungi: comparing MCM7, TSR1 and rRNA genes for single- and multi-gene analyses of the Kickxellomycotina

E.D. Tretter, E.M. Johnson, Y. Wang, P. Kandel, M.M. White

Persoonia. 2013 Jun; 30: 106–125. Published online 2013 Mar 20. doi: 10.3767/003158513X666394

PMCID:: PMC3734964

Abstract Article PDF–786K

Select item 364575017.

A Convolutional Code-Based Sequence Analysis Model and Its Application

Xiao Liu, Xiaoli Geng

Int J Mol Sci. 2013 Apr; 14(4): 8393–8405. Published online 2013 Apr 16. doi: 10.3390/ijms14048393

PMCID:: PMC3645750

Abstract Article PDF–517K

Select item 351014218.

Growth of Transplastomic Cells Expressing d-Amino Acid Oxidase in Chloroplasts Is Tolerant to d-Alanine and Inhibited by d-Valine

Martin F. Gisby, Elisabeth A. Mudd, Anil Day

Plant Physiol. 2012 Dec; 160(4): 2219–2226. Published online 2012 Oct 18. doi: 10.1104/pp.112.204107

PMCID:: PMC3510142

Abstract Article PDF–585K

Select item 348355319.

Paired-end sequencing of Fosmid libraries by Illumina

Louise J.S. Williams, Diana G. Tabbaa, Na Li, Aaron M. Berlin, Terrance P. Shea, Iain MacCallum, Michael S. Lawrence, Yotam Drier, Gad Getz, Sarah K. Young, David B. Jaffe, Chad Nusbaum, Andreas Gnirke

Genome Res. 2012 Nov; 22(11): 2241–2249. doi: 10.1101/gr.138925.112