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Select item 70389431.

The conserved 3′ UTR-derived small RNA NarS mediates mRNA crossregulation during nitrate respiration

Chuan Wang, Yanjie Chao, Gianluca Matera, Qian Gao, Jörg Vogel

Nucleic Acids Res. 2020 Feb 28; 48(4): 2126–2143. Published online 2019 Dec 21. doi: 10.1093/nar/gkz1168

PMCID:: PMC7038943

Abstract Article PDF–8.3M

Select item 66778162.

Occurrence of randomly recombined functional 16S rRNA genes in Thermus thermophilus suggests genetic interoperability and promiscuity of bacterial 16S rRNAs

Kentaro Miyazaki, Natsuki Tomariguchi

Sci Rep. 2019; 9: 11233. Published online 2019 Aug 2. doi: 10.1038/s41598-019-47807-z

PMCID:: PMC6677816

Abstract Article PDF–1.6M

Select item 63933943.

Functional expansion of a TCA cycle operon mRNA by a 3′ end-derived small RNA

Masatoshi Miyakoshi, Gianluca Matera, Kanako Maki, Yasuhiro Sone, Jörg Vogel

Nucleic Acids Res. 2019 Feb 28; 47(4): 2075–2088. Published online 2018 Dec 12. doi: 10.1093/nar/gky1243

PMCID:: PMC6393394

Abstract Article PDF–3.0M

Select item 63548064.

sRNA Target Prediction Organizing Tool (SPOT) Integrates Computational and Experimental Data To Facilitate Functional Characterization of Bacterial Small RNAs

Alisa M. King, Carin K. Vanderpool, Patrick H. Degnan

mSphere. 2019 Jan-Feb; 4(1): e00561-18. Published online 2019 Jan 30. doi: 10.1128/mSphere.00561-18

PMCID:: PMC6354806

Abstract Article PDF–543K

Select item 56355745.

Complete genome sequence of Citrobacter werkmanii strain BF-6 isolated from industrial putrefaction

Gang Zhou, Hong Peng, Ying-si Wang, Xiao-mo Huang, Xiao-bao Xie, Qing-shan Shi

BMC Genomics. 2017; 18: 765. Published online 2017 Oct 10. doi: 10.1186/s12864-017-4157-9

PMCID:: PMC5635574

Abstract Article PDF–2.5M

Select item 55750076.

Intermolecular base stacking mediates RNA-RNA interaction in a crystal structure of the RNA chaperone Hfq

Eike C. Schulz, Markus Seiler, Cecilia Zuliani, Franka Voigt, Vladimir Rybin, Vivian Pogenberg, Norbert Mücke, Matthias Wilmanns, Toby J. Gibson, Orsolya Barabas

Sci Rep. 2017; 7: 9903. Published online 2017 Aug 29. doi: 10.1038/s41598-017-10085-8

PMCID:: PMC5575007

Abstract Article PDF–3.3M

Select item 55357627.

Natural RNA polymerase aptamers regulate transcription in E. coli

Nadezda Sedlyarova, Philipp Rescheneder, Andrés Magán, Niko Popitsch, Natascha Rziha, Ivana Bilusic, Vitaly Epshtein, Bob Zimmermann, Meghan Lybecker, Vitaly Sedlyarov, Renée Schroeder, Evgeny Nudler

Mol Cell. Author manuscript; available in PMC 2018 Jul 6.

Published in final edited form as: Mol Cell. 2017 Jul 6; 67(1): 30–43.e6. Published online 2017 Jun 22. doi: 10.1016/j.molcel.2017.05.025

PMCID:: PMC5535762

Abstract Article PDF–904K

Select item 54502488.

Analysis of EAWAG-BBD pathway prediction system for the identification of malathion degrading microbes

Subramaniam Sivakumar, Palanivel Anitha, Balsubramanian Ramesh, Gopal Suresh

Bioinformation. 2017; 13(3): 73–77. Published online 2017 Mar 31. doi: 10.6026/97320630013073

PMCID:: PMC5450248

Abstract Article PDF–717K

Select item 51374179.

The target spectrum of SdsR small RNA in Salmonella

Kathrin S. Fröhlich, Katharina Haneke, Kai Papenfort, Jörg Vogel

Nucleic Acids Res. 2016 Dec 1; 44(21): 10406–10422. Published online 2016 Jul 12. doi: 10.1093/nar/gkw632

PMCID:: PMC5137417

Abstract Article PDF–3.5M

Select item 502311710.

Type 3 Fimbriae Encoded on Plasmids Are Expressed from a Unique Promoter without Affecting Host Motility, Facilitating an Exceptional Phenotype That Enhances Conjugal Plasmid Transfer

Jonas Stenløkke Madsen, Leise Riber, Witold Kot, Alrun Basfeld, Mette Burmølle, Lars Hestbjerg Hansen, Søren Johannes Sørensen

PLoS One. 2016; 11(9): e0162390. Published online 2016 Sep 14. doi: 10.1371/journal.pone.0162390

PMCID:: PMC5023117

Abstract Article PDF–1.9M

Select item 473872511.

Restriction Profiling of 23S Microheterogenic Ribosomal Repeats for Detection and Characterizing of E. coli and Their Clonal, Pathogenic, and Phylogroups

Parvathi Jayasree Rajagopalan Nair, Sunita Singh

J Pathog. 2015; 2015: 562136. Published online 2015 Dec 22. doi: 10.1155/2015/562136

PMCID:: PMC4738725

Abstract Article PDF–1.1M

Select item 442344112.

The antimicrobial activity of heterotrophic bacteria isolated from the marine sponge Erylus deficiens (Astrophorida, Geodiidae)

Ana Patrícia Graça, Flávia Viana, Joana Bondoso, Maria Inês Correia, Luis Gomes, Madalena Humanes, Alberto Reis, Joana R. Xavier, Helena Gaspar, Olga M. Lage

Front Microbiol. 2015; 6: 389. Published online 2015 May 7. doi: 10.3389/fmicb.2015.00389

PMCID:: PMC4423441

Abstract Article PDF–2.8M

Select item 406058313.

The gut microbiota of larvae of Rhynchophorus ferrugineus Oliver (Coleoptera: Curculionidae)

Marcello Tagliavia, Enzo Messina, Barbara Manachini, Simone Cappello, Paola Quatrini

BMC Microbiol. 2014; 14: 136. Published online 2014 May 30. doi: 10.1186/1471-2180-14-136

PMCID:: PMC4060583

Abstract Article PDF–671K

Select item 383130914.

A small RNA activates CFA synthase by isoform-specific mRNA stabilization

Kathrin Sophie Fröhlich, Kai Papenfort, Agnes Fekete, Jörg Vogel

EMBO J. 2013 Nov 13; 32(22): 2963–2979. Published online 2013 Oct 18. doi: 10.1038/emboj.2013.222

PMCID:: PMC3831309

Abstract Article PDF–1.3M

Select item 381539315.

Natural products genomics

Roland J. Siezen, Barzan I. Khayatt

Microb Biotechnol. 2008 Jul; 1(4): 275–282. Published online 2008 Jun 28. doi: 10.1111/j.1751-7915.2008.00044.x

PMCID:: PMC3815393

Article PDF–276K

Select item 377189616.

Genetic Characterization of Atypical Citrobacter freundii

Gabriela Delgado, Valeria Souza, Rosario Morales, René Cerritos, Andrea González-González, José Luis Méndez, Virginia Vázquez, Alejandro Cravioto

PLoS One. 2013; 8(9): e74120. Published online 2013 Sep 12. doi: 10.1371/journal.pone.0074120

PMCID:: PMC3771896

Abstract Article PDF–1.1M

Select item 375393217.

An RpoS-dependent sRNA regulates the expression of a chaperone involved in protein folding

Inês Jesus Silva, Álvaro Darío Ortega, Sandra Cristina Viegas, Francisco García-del Portillo, Cecília Maria Arraiano

RNA. 2013 Sep; 19(9): 1253–1265. doi: 10.1261/rna.039537.113

PMCID:: PMC3753932

Abstract Article PDF–1.1M

Select item 373274518.

Investigation into the Physiologies of Aeromonas veronii in vitro and Inside the Digestive Tract of the Medicinal Leech Using RNA-seq

Lindsey Bomar, Joerg Graf

Biol Bull. Author manuscript; available in PMC 2013 Aug 4.

Published in final edited form as: Biol Bull. 2012 Aug; 223(1): 155–166. doi: 10.1086/BBLv223n1p155

PMCID:: PMC3732745

Abstract Article PDF–2.9M

Select item 371665319.

Sialic acid utilization by Cronobacter sakazakii

Susan Joseph, Sumyya Hariri, Naqash Masood, Stephen Forsythe

Microb Inform Exp. 2013; 3: 3. Published online 2013 May 24. doi: 10.1186/2042-5783-3-3

PMCID:: PMC3716653

Abstract Article PDF–1.7M

Select item 350436320.

Insights into the Emergent Bacterial Pathogen Cronobacter spp., Generated by Multilocus Sequence Typing and Analysis

Susan Joseph, Stephen J. Forsythe

Front Microbiol. 2012; 3: 397. Prepublished online 2012 Oct 17. Published online 2012 Nov 22. doi: 10.3389/fmicb.2012.00397

PMCID:: PMC3504363

Abstract Article PDF–2.1M

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