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Select item 63640421.

RGAAT: A Reference-based Genome Assembly and Annotation Tool for New Genomes and Upgrade of Known Genomes

Wanfei Liu, Shuangyang Wu, Qiang Lin, Shenghan Gao, Feng Ding, Xiaowei Zhang, Hasan Awad Aljohi, Jun Yu, Songnian Hu

Genomics Proteomics Bioinformatics. 2018 Oct; 16(5): 373–381. Published online 2018 Dec 21. doi: 10.1016/j.gpb.2018.03.006

PMCID:: PMC6364042

Abstract Article PDF–653K

Select item 63009202.

Metabolic engineering of Methylobacterium extorquens AM1 for the production of butadiene precursor

Jing Yang, Chang-Tai Zhang, Xiao-Jie Yuan, Min Zhang, Xu-Hua Mo, Ling-Ling Tan, Li-Ping Zhu, Wen-Jing Chen, Ming-Dong Yao, Bo Hu, Song Yang

Microb Cell Fact. 2018; 17: 194. Published online 2018 Dec 20. doi: 10.1186/s12934-018-1042-4

PMCID:: PMC6300920

Abstract Article PDF–1.7M

Select item 61068233.

Astaxanthin overproduction in yeast by strain engineering and new gene target uncovering

Jin Jin, Ying Wang, Mingdong Yao, Xiaoli Gu, Bo Li, Hong Liu, Mingzhu Ding, Wenhai Xiao, Yingjin Yuan

Biotechnol Biofuels. 2018; 11: 230. Published online 2018 Aug 23. doi: 10.1186/s13068-018-1227-4

PMCID:: PMC6106823

Abstract Article PDF–4.4M

Select item 59607174.

Saccharomyces cerevisiae Differential Functionalization of Presumed ScALT1 and ScALT2 Alanine Transaminases Has Been Driven by Diversification of Pyridoxal Phosphate Interactions

Erendira Rojas-Ortega, Beatriz Aguirre-López, Horacio Reyes-Vivas, Martín González-Andrade, Jose C. Campero-Basaldúa, Juan P. Pardo, Alicia González

Front Microbiol. 2018; 9: 944. Published online 2018 May 14. doi: 10.3389/fmicb.2018.00944

PMCID:: PMC5960717

Abstract Article PDF–3.5M

Select item 59348515.

EuGI: a novel resource for studying genomic islands to facilitate horizontal gene transfer detection in eukaryotes

Frederick Johannes Clasen, Rian Ewald Pierneef, Bernard Slippers, Oleg Reva

BMC Genomics. 2018; 19: 323. Published online 2018 May 3. doi: 10.1186/s12864-018-4724-8

PMCID:: PMC5934851

Abstract Article PDF–1.1M

Select item 54293186.

Autolysis of Pichia pastoris induced by cold

Yaneth Bartolo-Aguilar, Luc Dendooven, Cipriano Chávez-Cabrera, Luis B. Flores-Cotera, María E. Hidalgo-Lara, Lourdes Villa-Tanaca, Rodolfo Marsch

AMB Express. 2017; 7: 95. Published online 2017 May 12. doi: 10.1186/s13568-017-0397-y

Correction in:: AMB Express. 2018; 8: 185.

PMCID:: PMC5429318

Abstract Article PDF–1.4M

Select item 53617697.

Data on optimization of expression and purification of AIMP2-DX2 protein in Escherichia coli

Roshan Jha, Hye Young Cho, Ameeq Ul Mushtaq, Kiho Lee, Dae Gyu Kim, Sunghoon Kim, Young Ho Jeon

Data Brief. 2017 Apr; 11: 533–536. Published online 2017 Mar 10. doi: 10.1016/j.dib.2017.03.011

PMCID:: PMC5361769

Abstract Article PDF–641K

Select item 50633828.

Scarless Gene Tagging with One-Step Transformation and Two-Step Selection in Saccharomyces cerevisiae and Schizosaccharomyces pombe

Dirk Landgraf, Dann Huh, Erinc Hallacli, Susan Lindquist

PLoS One. 2016; 11(10): e0163950. Published online 2016 Oct 13. doi: 10.1371/journal.pone.0163950

PMCID:: PMC5063382

Abstract Article PDF–4.1M

Select item 49790949.

Protective Effects of Arginine on Saccharomyces cerevisiae Against Ethanol Stress

Yanfei Cheng, Zhaoli Du, Hui Zhu, Xuena Guo, Xiuping He

Sci Rep. 2016; 6: 31311. Published online 2016 Aug 10. doi: 10.1038/srep31311

PMCID:: PMC4979094

Abstract Article PDF–1.3M

Select item 472731010.

Extracting DNA words based on the sequence features: non-uniform distribution and integrity

Zhi Li, Hongyan Cao, Yuehua Cui, Yanbo Zhang

Theor Biol Med Model. 2016; 13: 2. Published online 2016 Jan 25. doi: 10.1186/s12976-016-0028-3

PMCID:: PMC4727310

Abstract Article PDF–785K

Select item 470960911.

Long Read Alignment with Parallel MapReduce Cloud Platform

Ahmed Abdulhakim Al-Absi, Dae-Ki Kang

Biomed Res Int. 2015; 2015: 807407. Published online 2015 Dec 29. doi: 10.1155/2015/807407

PMCID:: PMC4709609

Abstract Article PDF–2.4M

Select item 452736212.

An investigation into inter- and intragenomic variations of graphic genomic signatures

Rallis Karamichalis, Lila Kari, Stavros Konstantinidis, Steffen Kopecki

BMC Bioinformatics. 2015; 16: 246. Published online 2015 Aug 7. doi: 10.1186/s12859-015-0655-4

PMCID:: PMC4527362

Abstract Article PDF–2.5M

Select item 445967713.

Light-weight reference-based compression of FASTQ data

Yongpeng Zhang, Linsen Li, Yanli Yang, Xiao Yang, Shan He, Zexuan Zhu

BMC Bioinformatics. 2015; 16(1): 188. Published online 2015 Jun 9. doi: 10.1186/s12859-015-0628-7

PMCID:: PMC4459677

Abstract Article PDF–963K

Select item 426366114.

Expression and Evolution of the Non-Canonically Translated Yeast Mitochondrial Acetyl-CoA Carboxylase Hfa1p

Fumi Suomi, Katja E. Menger, Geoffray Monteuuis, Uta Naumann, V. A. Samuli Kursu, Antonina Shvetsova, Alexander J. Kastaniotis

PLoS One. 2014; 9(12): e114738. Published online 2014 Dec 11. doi: 10.1371/journal.pone.0114738

PMCID:: PMC4263661

Abstract Article PDF–2.5M

Select item 425692915.

Development and immunological assessment of VLP-based immunogens exposing the membrane-proximal region of the HIV-1 gp41 protein

Thomas D Benen, Paul Tonks, Alexander Kliche, Ruth Kapzan, Jonathan L Heeney, Ralf Wagner

J Biomed Sci. 2014; 21(1): 79. Published online 2014 Aug 27. doi: 10.1186/s12929-014-0079-x

PMCID:: PMC4256929

Abstract Article PDF–2.8M

Select item 422414916.

Nucleosome-Positioning Sequence Repeats Impact Chromatin Silencing in Yeast Minichromosomes

Sangita A. Chakraborty, Abid A. Kazi, Tamreen M. Khan, Sergei A. Grigoryev

Genetics. 2014 Nov; 198(3): 1015–1029. Published online 2014 Sep 3. doi: 10.1534/genetics.114.169508

PMCID:: PMC4224149

Abstract Article PDF–2.9M

Select item 420041117.

Production of salidroside in metabolically engineered Escherichia coli

Yanfen Bai, Huiping Bi, Yibin Zhuang, Chang Liu, Tao Cai, Xiaonan Liu, Xueli Zhang, Tao Liu, Yanhe Ma

Sci Rep. 2014; 4: 6640. Published online 2014 Oct 17. doi: 10.1038/srep06640

PMCID:: PMC4200411

Abstract Article PDF–685K

Select item 396247918.

The Reference Genome Sequence of Saccharomyces cerevisiae: Then and Now

Stacia R. Engel, Fred S. Dietrich, Dianna G. Fisk, Gail Binkley, Rama Balakrishnan, Maria C. Costanzo, Selina S. Dwight, Benjamin C. Hitz, Kalpana Karra, Robert S. Nash, Shuai Weng, Edith D. Wong, Paul Lloyd, Marek S. Skrzypek, Stuart R. Miyasato, Matt Simison, J. Michael Cherry

G3 (Bethesda) 2014 Mar; 4(3): 389–398. Published online 2013 Dec 27. doi: 10.1534/g3.113.008995