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Items: 1 to 20 of 28

1.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
2.
All Quiet on the TE Front? The Role of Chromatin in Transposable Element Silencing
Luisa Di Stefano
Cells. 2022 Aug; 11(16): 2501. Published online 2022 Aug 11. doi: 10.3390/cells11162501
PMCID:
PMC9406493
AbstractArticlePDF–2.9M
3.
Functions of HP1 proteins in transcriptional regulation
John M. Schoelz, Nicole C. Riddle
Epigenetics Chromatin. 2022; 15: 14. Published online 2022 May 7. doi: 10.1186/s13072-022-00453-8
PMCID:
PMC9078007
AbstractArticlePDF–1.1M
4.
Msl3 promotes germline stem cell differentiation in female Drosophila
Alicia McCarthy, Kahini Sarkar, Elliot T. Martin, Maitreyi Upadhyay, Seoyeon Jang, Nathan D. Williams, Paolo E. Forni, Michael Buszczak, Prashanth Rangan
Development. 2022 Jan 1; 149(1): dev199625. Published online 2022 Jan 4. doi: 10.1242/dev.199625
PMCID:
PMC8783043
AbstractArticle
5.
Multi-Scale Organization of the Drosophila melanogaster Genome
Samantha C. Peterson, Kaylah B. Samuelson, Stacey L. Hanlon
Genes (Basel) 2021 Jun; 12(6): 817. Published online 2021 May 27. doi: 10.3390/genes12060817
PMCID:
PMC8228293
AbstractArticlePDF–1.0M
6.
Kinetochore-independent mechanisms of sister chromosome separation
Hannah Vicars, Travis Karg, Brandt Warecki, Ian Bast, William Sullivan
PLoS Genet. 2021 Jan; 17(1): e1009304. Published online 2021 Jan 29. doi: 10.1371/journal.pgen.1009304
PMCID:
PMC7886193
AbstractArticlePDF–2.8M
7.
Stellate Genes and the piRNA Pathway in Speciation and Reproductive Isolation of Drosophila melanogaster
Vladimir E. Adashev, Alexei A. Kotov, Sergei S. Bazylev, Aleksei S. Shatskikh, Alexei A. Aravin, Ludmila V. Olenina
Front Genet. 2020; 11: 610665. Published online 2021 Jan 22. doi: 10.3389/fgene.2020.610665
PMCID:
PMC7874207
AbstractArticlePDF–2.9M
8.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
9.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
10.
Widespread Positive Selection Drives Differentiation of Centromeric Proteins in the Drosophila melanogaster subgroup
Emily A. Beck, Ana Llopart
Sci Rep. 2015; 5: 17197. Published online 2015 Nov 25. doi: 10.1038/srep17197
PMCID:
PMC4658640
AbstractArticlePDF–605K
11.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
12.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
13.
Mitotic fidelity requires transgenerational action of a testis-restricted HP1
Mia T Levine, Helen M Vander Wende, Harmit S Malik
eLife. 2015; 4: e07378. Published online 2015 Jul 7. doi: 10.7554/eLife.07378
PMCID:
PMC4491702
AbstractArticlePDF–3.4M
14.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
15.
A rapidly evolving genomic toolkit for Drosophila heterochromatin
Mia T Levine, Harmit S Malik
Fly (Austin) 2013 Jul 1; 7(3): 137–141. Published online 2013 Mar 21. doi: 10.4161/fly.24335
PMCID:
PMC4049844
AbstractArticlePDF–608K
16.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M
17.
The Many Landscapes of Recombination in Drosophila melanogaster
Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin
PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905
PMCID:
PMC3469467
AbstractArticlePDF–1.6M
18.
Phylogenomic Analysis Reveals Dynamic Evolutionary History of the Drosophila Heterochromatin Protein 1 (HP1) Gene Family
Mia T. Levine, Connor McCoy, Danielle Vermaak, Yuh Chwen G. Lee, Mary Alice Hiatt, Frederick A. Matsen, Harmit S. Malik
PLoS Genet. 2012 Jun; 8(6): e1002729. Published online 2012 Jun 21. doi: 10.1371/journal.pgen.1002729
PMCID:
PMC3380853
AbstractArticlePDF–981K
19.
A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene
G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger
Cell. Author manuscript; available in PMC 2011 Nov 12.
Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047
PMCID:
PMC3040441
AbstractArticlePDF–2.0M
20.
Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin
Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker
Science. Author manuscript; available in PMC 2010 Feb 19.
Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816
PMCID:
PMC2825053
AbstractArticlePDF–858K

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