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Select item 66024131.

Feedback regulation of small RNA processing by the cleavage product

Svetlana Durica-Mitic, Boris Görke

RNA Biol. 2019; 16(8): 1055–1065. Published online 2019 May 22. doi: 10.1080/15476286.2019.1612693

PMCID:: PMC6602413

Abstract Article PDF–3.7M

Select item 41238552.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 30389313.

Application of GFAT as a Novel Selection Marker to Mediate Gene Expression

Guogan Wu, Yu Sun, Wei Qu, Ying Huang, Ling Lu, Lun Li, Weilan Shao

PLoS One. 2011; 6(2): e17082. Published online 2011 Feb 14. doi: 10.1371/journal.pone.0017082

PMCID:: PMC3038931

Abstract Article PDF–470K

Select item 27953114.

Transcriptional Regulation of the Escherichia coli Gene rraB, Encoding a Protein Inhibitor of RNase E

Li Zhou, Meng Zhao, Rachel Z. Wolf, David E. Graham, George Georgiou

J Bacteriol. 2009 Nov; 191(21): 6665–6674. Published online 2009 Aug 28. doi: 10.1128/JB.00344-09

PMCID:: PMC2795311

Abstract Article PDF–1.0M

Select item 23774315.

The small RNA GlmY acts upstream of the sRNA GlmZ in the activation of glmS expression and is subject to regulation by polyadenylation in Escherichia coli

Birte Reichenbach, Alexandre Maes, Falk Kalamorz, Eliane Hajnsdorf, Boris Görke

Nucleic Acids Res. 2008 May; 36(8): 2570–2580. Published online 2008 Mar 11. doi: 10.1093/nar/gkn091

PMCID:: PMC2377431

Abstract Article PDF–4.9M

Select item 22921776.

Protein abundance profiling of the Escherichia coli cytosol

Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman

BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102

PMCID:: PMC2292177

Abstract Article PDF–1.0M

Select item 22678187.

Two Seemingly Homologous Noncoding RNAs Act Hierarchically to Activate glmS mRNA Translation

Johannes H Urban, Jörg Vogel

PLoS Biol. 2008 Mar; 6(3): e64. Published online 2008 Mar 18. doi: 10.1371/journal.pbio.0060064

PMCID:: PMC2267818

Abstract Article PDF–627K

Select item 21442718.

The mechanism of sugar phosphate isomerization by glucosamine 6-phosphate synthase.

A. Teplyakov, G. Obmolova, M. A. Badet-Denisot, B. Badet

Protein Sci. 1999 Mar; 8(3): 596–602. doi: 10.1110/ps.8.3.596

PMCID:: PMC2144271

Summary PDF–535K

Select item 18856549.

Polyadenylation of a functional mRNA controls gene expression in Escherichia coli

Géraldine Joanny, Jacques Le Derout, Dominique Bréchemier-Baey, Valérie Labas, Joelle Vinh, Philippe Régnier, Eliane Hajnsdorf

Nucleic Acids Res. 2007 Apr; 35(8): 2494–2502. Published online 2007 Mar 29. doi: 10.1093/nar/gkm120

PMCID:: PMC1885654

Abstract Article PDF–4.6M

Select item 188528110.

Mutations in gfpt1 and skiv2l2 Cause Distinct Stage-Specific Defects in Larval Melanocyte Regeneration in Zebrafish

Chao-Tsung Yang, Anna E Hindes, Keith A Hultman, Stephen L Johnson

PLoS Genet. 2007 Jun; 3(6): e88. Prepublished online 2007 Apr 17. Published online 2007 Jun 1. doi: 10.1371/journal.pgen.0030088

PMCID:: PMC1885281

Abstract Article PDF–770K

Select item 168148211.

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

Tomoya Baba, Takeshi Ara, Miki Hasegawa, Yuki Takai, Yoshiko Okumura, Miki Baba, Kirill A Datsenko, Masaru Tomita, Barry L Wanner, Hirotada Mori

Mol Syst Biol. 2006; 2: 2006.0008. Published online 2006 Feb 21. doi: 10.1038/msb4100050

PMCID:: PMC1681482

Abstract Article PDF–400K

Select item 168148112.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 163647513.

The majority of Escherichia coli mRNAs undergo post-transcriptional modification in exponentially growing cells

Bijoy K. Mohanty, Sidney R. Kushner

Nucleic Acids Res. 2006 Nov; 34(19): 5695–5704. Published online 2006 Oct 12. doi: 10.1093/nar/gkl684

PMCID:: PMC1636475

Abstract Article PDF–168K

Select item 134745214.

MEROPS: the peptidase database

Neil D. Rawlings, Fraser R. Morton, Alan J. Barrett

Nucleic Acids Res. 2006 Jan 1; 34(Database issue): D270–D272. Published online 2005 Dec 28. doi: 10.1093/nar/gkj089

PMCID:: PMC1347452

Abstract Article PDF–55K

Select item 132520015.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405