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Items: 1 to 20 of 209

1.
Three-dimensional reconstruction of the 70S Escherichia coli ribosome in ice: the distribution of ribosomal RNA
J Cell Biol. 1991 Nov 1; 115(3): 597–605. doi: 10.1083/jcb.115.3.597
PMCID:
PMC2289182
SummaryPDF–2.4M
2.
The conformation of 23S rRNA nucleotide A2058 determines its recognition by the ErmE methyltransferase.
B Vester, L H Hansen, S Douthwaite
RNA. 1995 Jul; 1(5): 501–509.
PMCID:
PMC1482423
SummaryPage BrowsePDF–2.5M
3.
A dual-specificity pseudouridine synthase: an Escherichia coli synthase purified and cloned on the basis of its specificity for psi 746 in 23S RNA is also specific for psi 32 in tRNA(phe).
J Wrzesinski, K Nurse, A Bakin, B G Lane, J Ofengand
RNA. 1995 Jun; 1(4): 437–448.
PMCID:
PMC1482406
SummaryPage BrowsePDF–3.2M
4.
A novel partial modification at C2501 in Escherichia coli 23S ribosomal RNA
THOMAS EMIL ANDERSEN, BO TORBEN PORSE, FINN KIRPEKAR
RNA. 2004 Jun; 10(6): 907–913. doi: 10.1261/rna.5259404
PMCID:
PMC1370582
AbstractArticlePDF–117K
5.
The G2447A mutation does not affect ionization of a ribosomal group taking part in peptide bond formation
MALTE BERINGER, SARAH ADIO, WOLFGANG WINTERMEYER, MARINA RODNINA
RNA. 2003 Aug; 9(8): 919–922. doi: 10.1261/rna.5600503
PMCID:
PMC1370457
AbstractArticlePDF–93K
6.
Common and distinctive features of GNRA tetraloops based on a GUAA tetraloop structure at 1.4 Å resolution
CARL C. CORRELL, KERREN SWINGER
RNA. 2003 Mar; 9(3): 355–363. doi: 10.1261/rna.2147803
PMCID:
PMC1370402
AbstractArticlePDF–663K
7.
Crosslinking of 4.5S RNA to the Escherichia coli ribosome in the presence or absence of the protein Ffh.
Jutta Rinke-Appel, Monika Osswald, Klaus von Knoblauch, Florian Mueller, Richard Brimacombe, Petr Sergiev, Olga Avdeeva, Alexey Bogdanov, Olga Dontsova
RNA. 2002 May; 8(5): 612–625. doi: 10.1017/s1355838202020095
PMCID:
PMC1370282
SummaryPDF–4.0M
8.
Osmolytes stimulate the reconstitution of functional 50S ribosomes from in vitro transcripts of Escherichia coli 23S rRNA.
Katharina Semrad, Rachel Green
RNA. 2002 Apr; 8(4): 401–411. doi: 10.1017/s1355838202029722
PMCID:
PMC1370264
SummaryPDF–8.5M
9.
Identification and site of action of the remaining four putative pseudouridine synthases in Escherichia coli.
M Del Campo, Y Kaya, J Ofengand
RNA. 2001 Nov; 7(11): 1603–1615.
PMCID:
PMC1370202
SummaryPDF–2.0M
10.
pH-dependent conformational flexibility within the ribosomal peptidyl transferase center.
G W Muth, L Chen, A B Kosek, S A Strobel
RNA. 2001 Oct; 7(10): 1403–1415.
PMCID:
PMC1370184
SummaryPDF–1.2M
11.
Initiation factor IF 2 binds to the alpha-sarcin loop and helix 89 of Escherichia coli 23S ribosomal RNA.
A La Teana, C O Gualerzi, A E Dahlberg
RNA. 2001 Aug; 7(8): 1173–1179. doi: 10.1017/s1355838201010366
PMCID:
PMC1370164
SummaryPDF–1.8M
12.
The GA motif: an RNA element common to bacterial antitermination systems, rRNA, and eukaryotic RNAs.
W C Winkler, F J Grundy, B A Murphy, T M Henkin
RNA. 2001 Aug; 7(8): 1165–1172. doi: 10.1017/s1355838201002370
PMCID:
PMC1370163
SummaryPDF–443K
13.
A second function for pseudouridine synthases: A point mutant of RluD unable to form pseudouridines 1911, 1915, and 1917 in Escherichia coli 23S ribosomal RNA restores normal growth to an RluD-minus strain.
N S Gutgsell, M D Del Campo, S Raychaudhuri, J Ofengand
RNA. 2001 Jul; 7(7): 990–998. doi: 10.1017/s1355838201000243
PMCID:
PMC1370151
SummaryPDF–672K
14.
The Escherichia coli DEAD protein DbpA recognizes a small RNA hairpin in 23S rRNA.
C A Tsu, K Kossen, O C Uhlenbeck
RNA. 2001 May; 7(5): 702–709. doi: 10.1017/s1355838201010135
PMCID:
PMC1370122
SummaryPDF–917K
15.
A short fragment of 23S rRNA containing the binding sites for two ribosomal proteins, L24 and L4, is a key element for rRNA folding during early assembly.
U Stelzl, K H Nierhaus
RNA. 2001 Apr; 7(4): 598–609. doi: 10.1017/s1355838201002059
PMCID:
PMC1370113
SummaryPDF–3.0M
16.
Magnesium ions mediate contacts between phosphoryl oxygens at positions 2122 and 2176 of the 23S rRNA and ribosomal protein L1.
D Drygin, R A Zimmermann
RNA. 2000 Dec; 6(12): 1714–1726. doi: 10.1017/s1355838200001436
PMCID:
PMC1370042
SummaryPDF–2.3M
17.
Alterations in the peptidyltransferase and decoding domains of ribosomal RNA suppress mutations in the elongation factor G gene.
H Koosha, D Cameron, K Andrews, A E Dahlberg, P E March
RNA. 2000 Aug; 6(8): 1166–1173. doi: 10.1017/s1355838200000534
PMCID:
PMC1369990
SummaryPDF–281K
18.
Puromycin-rRNA interaction sites at the peptidyl transferase center.
C Rodriguez-Fonseca, H Phan, K S Long, B T Porse, S V Kirillov, R Amils, R A Garrett
RNA. 2000 May; 6(5): 744–754. doi: 10.1017/s1355838200000091
PMCID:
PMC1369954
SummaryPDF–678K
19.
Negative in vitro selection identifies the rRNA recognition motif for ErmE methyltransferase.
A K Nielsen, S Douthwaite, B Vester
RNA. 1999 Aug; 5(8): 1034–1041. doi: 10.1017/s1355838299990349
PMCID:
PMC1369827
SummaryPDF–256K
20.
Peptidyl transferase antibiotics perturb the relative positioning of the 3'-terminal adenosine of P/P'-site-bound tRNA and 23S rRNA in the ribosome.
S V Kirillov, B T Porse, R A Garrett
RNA. 1999 Aug; 5(8): 1003–1013. doi: 10.1017/s1355838299990568
PMCID:
PMC1369824
SummaryPDF–739K

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