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Items: 1 to 20 of 22

1.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
2.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
3.
A short perinuclear amphipathic α-helix in Apq12 promotes nuclear pore complex biogenesis
Wanlu Zhang, Azqa Khan, Jlenia Vitale, Annett Neuner, Kerstin Rink, Christian Lüchtenborg, Britta Brügger, Thomas H. Söllner, Elmar Schiebel
Open Biol. 2021 Nov; 11(11): 210250. Published online November 24, 2021. doi: 10.1098/rsob.210250
PMCID:
PMC8611336
AbstractArticlePDF–3.4M
4.
A mutation in budding yeast BRR6 affecting nuclear envelope insertion of the spindle pole body
Jennifer M Gardner, Eileen O'Toole, Sue L Jaspersen
MicroPubl Biol. 2021; 2021: 10.17912/micropub.biology.000463. Published online 2021 Sep 16. doi: 10.17912/micropub.biology.000463
PMCID:
PMC8449258
AbstractArticlePDF–1.7M
5.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
6.
Mapping the native organization of the yeast nuclear pore complex using nuclear radial intensity measurements
Pascal Vallotton, Sasikumar Rajoo, Matthias Wojtynek, Evgeny Onischenko, Annemarie Kralt, Carina Patrizia Derrer, Karsten Weis
Proc Natl Acad Sci U S A. 2019 Jul 16; 116(29): 14606–14613. Published online 2019 Jul 1. doi: 10.1073/pnas.1903764116
PMCID:
PMC6642398
AbstractArticlePDF–1.6M
7.
Brr6 plays a role in gene recruitment and transcriptional regulation at the nuclear envelope
Anne de Bruyn Kops, Jordan E. Burke, Christine Guthrie
Mol Biol Cell. 2018 Oct 15; 29(21): 2578–2590. doi: 10.1091/mbc.E18-04-0258
PMCID:
PMC6254580
AbstractArticlePDF–2.5M
8.
Systematic Analysis of Complex Genetic Interactions
Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers
Science. Author manuscript; available in PMC 2018 Nov 4.
Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729
PMCID:
PMC6215713
AbstractArticlePDF–1.9M
9.
Identification of the Novel Nup188-brr7 Allele in a Screen for Cold-Sensitive mRNA Export Mutants in Saccharomyces cerevisiae
Anne de Bruyn Kops, Christine Guthrie
G3 (Bethesda) 2018 Sep; 8(9): 2991–3003. Published online 2018 Jul 18. doi: 10.1534/g3.118.200447
PMCID:
PMC6118305
AbstractArticlePDF–1.7M
10.
Global analysis of genetic circuitry and adaptive mechanisms enabling resistance to the azole antifungal drugs
Harley O’Connor Mount, Nicole M. Revie, Robert T. Todd, Kaitlin Anstett, Cathy Collins, Michael Costanzo, Charles Boone, Nicole Robbins, Anna Selmecki, Leah E. Cowen
PLoS Genet. 2018 Apr; 14(4): e1007319. Published online 2018 Apr 27. doi: 10.1371/journal.pgen.1007319
PMCID:
PMC5922528
AbstractArticlePDF–7.1M
11.
Brr6 and Brl1 locate to nuclear pore complex assembly sites to promote their biogenesis
Wanlu Zhang, Annett Neuner, Diana Rüthnick, Timo Sachsenheimer, Christian Lüchtenborg, Britta Brügger, Elmar Schiebel
J Cell Biol. 2018 Mar 5; 217(3): 877–894. doi: 10.1083/jcb.201706024
PMCID:
PMC5839787
AbstractArticlePDF–4.7M
12.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
13.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
14.
Altered RNA processing and export lead to retention of mRNAs near transcription sites and nuclear pore complexes or within the nucleolus
Biplab Paul, Ben Montpetit
Mol Biol Cell. 2016 Sep 1; 27(17): 2742–2756. doi: 10.1091/mbc.E16-04-0244
PMCID:
PMC5007094
AbstractArticlePDF–3.9M
15.
One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy
Ido Yofe, Uri Weill, Matthias Meurer, Silvia Chuartzman, Einat Zalckvar, Omer Goldman, Shifra Ben-Dor, Conny Schütze, Nils Wiedemann, Michael Knop, Anton Khmelinskii, Maya Schuldiner
Nat Methods. Author manuscript; available in PMC 2016 Sep 22.
Published in final edited form as: Nat Methods. 2016 Apr; 13(4): 371–378. Published online 2016 Feb 29. doi: 10.1038/nmeth.3795
PMCID:
PMC4869835
AbstractArticlePDF–2.7M
16.
Yeast Integral Membrane Proteins Apq12, Brl1, and Brr6 Form a Complex Important for Regulation of Membrane Homeostasis and Nuclear Pore Complex Biogenesis
Museer A. Lone, Aaron E. Atkinson, Christine A. Hodge, Stéphanie Cottier, Fernando Martínez-Montañés, Shelley Maithel, Laurent Mène-Saffrané, Charles N. Cole, Roger Schneiter
Eukaryot Cell. 2015 Dec; 14(12): 1217–1227. Prepublished online 2015 Oct 2. Published online 2015 Nov 30. doi: 10.1128/EC.00101-15
PMCID:
PMC4664871
AbstractArticlePDF–1.8M
17.
Defining potentially conserved RNA regulons of homologous zinc-finger RNA-binding proteins
Tanja Scherrer, Christian Femmer, Ralph Schiess, Ruedi Aebersold, André P Gerber
Genome Biol. 2011; 12(1): R3. Published online 2011 Jan 13. doi: 10.1186/gb-2011-12-1-r3
PMCID:
PMC3091301
AbstractArticlePDF–1.3M
18.
Integral membrane proteins Brr6 and Apq12 link assembly of the nuclear pore complex to lipid homeostasis in the endoplasmic reticulum
Christine A. Hodg, Vineet Choudhary, Michael J. Wolyniak, John J. Scarcelli, Roger Schneiter, Charles N. Col
J Cell Sci. 2010 Jan 1; 123(1): 141–151. Published online 2009 Dec 16. doi: 10.1242/jcs.055046
PMCID:
PMC2794714
AbstractArticle
19.
High Quality Binary Protein Interaction Map of the Yeast Interactome Network
Haiyuan Yu, Pascal Braun, Muhammed A. Yildirim, Irma Lemmens, Kavitha Venkatesan, Julie Sahalie, Tomoko Hirozane-Kishikawa, Fana Gebreab, Na Li, Nicolas Simonis, Tong Hao, Jean-Francois Rual, Amélie Dricot, Alexei Vazquez, Ryan R. Murray, Christophe Simon, Leah Tardivo, Stanley Tam, Nenad Svrzikapa, Changyu Fan, Anne-Sophie de Smet, Adriana Motyl, Michael E. Hudson, Juyong Park, Xiaofeng Xin, Michael E. Cusick, Troy Moore, Charlie Boone, Michael Snyder, Frederick P. Roth, Albert-László Barabási, Jan Tavernier, David E. Hill, Marc Vidal
Science. Author manuscript; available in PMC 2009 Sep 18.
Published in final edited form as: Science. 2008 Oct 3; 322(5898): 104–110. Published online 2008 Aug 21. doi: 10.1126/science.1158684
PMCID:
PMC2746753
AbstractArticlePDF–2.2M
20.
Functional Characterization of Pneumocystis carinii brl1 by Transspecies Complementation Analysis
Libera Lo Presti, Moira Cockell, Lorenzo Cerutti, Viesturs Simanis, Philippe M. Hauser
Eukaryot Cell. 2007 Dec; 6(12): 2448–2452. Published online 2007 Nov 9. doi: 10.1128/EC.00321-07
PMCID:
PMC2168235
AbstractArticlePDF–341K

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