PMC Links for GEO Profiles (Select 10158868) - PMC

Result Filters

Links from GEO Profiles

Items: 1 to 20 of 98

<< First< Prev

Page of 5

Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 108418422.

Single-molecule quantitation of RNA-binding protein occupancy and stoichiometry defines a role for Yra1 (Aly/REF) in nuclear mRNP organization

Ryuta Asada, Andrew Dominguez, Ben Montpetit

Cell Rep. Author manuscript; available in PMC 2024 Feb 5.

Published in final edited form as: Cell Rep. 2023 Nov 28; 42(11): 113415. Published online 2023 Nov 14. doi: 10.1016/j.celrep.2023.113415

PMCID:: PMC10841842

Abstract Article PDF–3.9M

Select item 108111613.

Mft1, identified from a genome-wide screen of the yeast haploid mutants, mediates cell cycle arrest to counteract quinoxaline-induced toxicity

Abdallah Alhaj Sulaiman, Dana E. Al-Ansari, Reem Ali, Mustapha Aouida, Dindial Ramotar

Front Genet. 2023; 14: 1296383. Published online 2024 Jan 12. doi: 10.3389/fgene.2023.1296383

PMCID:: PMC10811161

Abstract Article PDF–2.0M

Select item 107988584.

Fast-evolving cofactors regulate the role of HEATR5 complexes in intra-Golgi trafficking

Lucas J. Marmorale, Huan Jin, Thomas G. Reidy, Brandon Palomino-Alonso, Christopher J. Zysnarski, Fatima Jordan-Javed, Sagar Lahiri, Mara C. Duncan

J Cell Biol. 2024 Mar 4; 223(3): e202309047. Published online 2024 Jan 19. doi: 10.1083/jcb.202309047

PMCID:: PMC10798858

Abstract Article PDF–6.4M

Select item 107261625.

Tho2 is critical for the recruitment of Rrp6 to chromatin in response to perturbed mRNP biogenesis

Valentin Beauvais, Kévin Moreau, Bojan Žunar, Nadège Hervouet-Coste, Ana Novačić, Aurélia Le Dantec, Michael Primig, Christine Mosrin-Huaman, Igor Stuparević, A. Rachid Rahmouni

RNA. 2024 Jan; 30(1): 89–98. doi: 10.1261/rna.079707.123

PMCID:: PMC10726162

Abstract Article PDF–3.8M

Select item 107001386.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 106533887.

Cross-linking mass spectrometric analysis of the endogenous TREX complex from Saccharomyces cerevisiae

Carina Kern, Christin Radon, Wolfgang Wende, Alexander Leitner, Katja Sträßer

RNA. 2023 Dec; 29(12): 1870–1880. doi: 10.1261/rna.079758.123

PMCID:: PMC10653388

Abstract Article PDF–13M

Select item 103931948.

Nuclear mRNPs are compact particles packaged with a network of proteins promoting RNA–RNA interactions

Fabien Bonneau, Jérôme Basquin, Barbara Steigenberger, Tillman Schäfer, Ingmar B. Schäfer, Elena Conti

Genes Dev. 2023 Jun 1; 37(11-12): 505–517. doi: 10.1101/gad.350630.123

PMCID:: PMC10393194

Abstract Article PDF–6.1M

Select item 102333689.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 983634810.

A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast

Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger

G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296

PMCID:: PMC9836348

Abstract Article PDF–857K

Select item 963098611.

A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans

Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor

Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136

PMCID:: PMC9630986

Abstract Article PDF–2.2M

Select item 920981112.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 877559113.

Systematic Screening of Penetratin’s Protein Targets by Yeast Proteome Microarrays

Pramod Shah, Chien-Sheng Chen

Int J Mol Sci. 2022 Jan; 23(2): 712. Published online 2022 Jan 10. doi: 10.3390/ijms23020712

PMCID:: PMC8775591

Abstract Article PDF–5.0M

Select item 849296114.

Spt4 facilitates the movement of RNA polymerase II through the +2 nucleosomal barrier

Ülkü Uzun, Thomas Brown, Harry Fischl, Andrew Angel, Jane Mellor

Cell Rep. 2021 Sep 28; 36(13): 109755. Published online 2021 Sep 29. doi: 10.1016/j.celrep.2021.109755

PMCID:: PMC8492961

Abstract Article

Select item 836798315.

Global view on the metabolism of RNA poly(A) tails in yeast Saccharomyces cerevisiae

Agnieszka Tudek, Paweł S. Krawczyk, Seweryn Mroczek, Rafał Tomecki, Matti Turtola, Katarzyna Matylla-Kulińska, Torben Heick Jensen, Andrzej Dziembowski

Nat Commun. 2021; 12: 4951. Published online 2021 Aug 16. doi: 10.1038/s41467-021-25251-w

PMCID:: PMC8367983

Abstract Article PDF–6.0M

Select item 809624416.

The Pif1 helicase is actively inhibited during meiotic recombination which restrains gene conversion tract length

Dipti Vinayak Vernekar, Giordano Reginato, Céline Adam, Lepakshi Ranjha, Florent Dingli, Marie-Claude Marsolier, Damarys Loew, Raphaël Guérois, Bertrand Llorente, Petr Cejka, Valérie Borde

Nucleic Acids Res. 2021 May 7; 49(8): 4522–4533. Published online 2021 Apr 6. doi: 10.1093/nar/gkab232

PMCID:: PMC8096244

Abstract Article PDF–4.1M

Select item 804374717.

Cryo-EM structure of the yeast TREX complex and coordination with the SR-like protein Gbp2

Yihu Xie, Bradley P Clarke, Yong Joon Kim, Austin L Ivey, Pate S Hill, Yi Shi, Yi Ren

eLife. 2021; 10: e65699. Published online 2021 Mar 31. doi: 10.7554/eLife.65699

PMCID:: PMC8043747

Abstract Article PDF–3.7M

Select item 775888018.

Purified Smc5/6 Complex Exhibits DNA Substrate Recognition and Compaction

Pilar Gutierrez-Escribano, Silvia Hormeño, Julene Madariaga-Marcos, Roger Solé-Soler, Francis J. O’Reilly, Kyle Morris, Clara Aicart-Ramos, Ricardo Aramayo, Alex Montoya, Holger Kramer, Juri Rappsilber, Jordi Torres-Rosell, Fernando Moreno-Herrero, Luis Aragon

Mol Cell. 2020 Dec 17; 80(6): 1039–1054.e6. doi: 10.1016/j.molcel.2020.11.012