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Items: 13

1.
SARS-CoV-2 RNAemia and proteomic trajectories inform prognostication in COVID-19 patients admitted to intensive care
Clemens Gutmann, Kaloyan Takov, Sean A. Burnap, Bhawana Singh, Hashim Ali, Konstantinos Theofilatos, Ella Reed, Maria Hasman, Adam Nabeebaccus, Matthew Fish, Mark JW. McPhail, Kevin O’Gallagher, Lukas E. Schmidt, Christian Cassel, Marieke Rienks, Xiaoke Yin, Georg Auzinger, Salvatore Napoli, Salma F. Mujib, Francesca Trovato, Barnaby Sanderson, Blair Merrick, Umar Niazi, Mansoor Saqi, Konstantina Dimitrakopoulou, Rafael Fernández-Leiro, Silke Braun, Romy Kronstein-Wiedemann, Katie J. Doores, Jonathan D. Edgeworth, Ajay M. Shah, Stefan R. Bornstein, Torsten Tonn, Adrian C. Hayday, Mauro Giacca, Manu Shankar-Hari, Manuel Mayr
Nat Commun. 2021; 12: 3406. Published online 2021 Jun 7. doi: 10.1038/s41467-021-23494-1
PMCID:
PMC8184784
AbstractArticlePDF–7.5M
2.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
3.
The midbody interactome reveals unexpected roles for PP1 phosphatases in cytokinesis
Luisa Capalbo, Zuni I. Bassi, Marco Geymonat, Sofia Todesca, Liviu Copoiu, Anton J. Enright, Giuliano Callaini, Maria Giovanna Riparbelli, Lu Yu, Jyoti S. Choudhary, Enrico Ferrero, Sally Wheatley, Max E. Douglas, Masanori Mishima, Pier Paolo D’Avino
Nat Commun. 2019; 10: 4513. Published online 2019 Oct 4. doi: 10.1038/s41467-019-12507-9
PMCID:
PMC6778137
AbstractArticlePDF–7.8M
4.
hORFeome v3.1: A resource of human open reading frames representing over 10,000 human genes
Philippe Lamesch, Ning Li, Stuart Milstein, Changyu Fan, Tong Hao, Gabor Szabo, Zhenjun Hu, Kavitha Venkatesan, Graeme Bethel, Paul Martin, Jane Rogers, Stephanie Lawlor, Stuart McLaren, Amélie Dricot, Heather Borick, Michael E. Cusick, Jean Vandenhaute, Ian Dunham, David E. Hill, Marc Vidal
Genomics. 2007 Mar; 89(3): 307–315. doi: 10.1016/j.ygeno.2006.11.012
PMCID:
PMC4647941
AbstractArticle
5.
Large-scale genome-wide association study of Asian population reveals genetic factors in FRMD4A and other loci influencing smoking initiation and nicotine dependence
Dankyu Yoon, Young-Jin Kim, Wen-Yan Cui, Andrew Van der Vaart, Yoon Shin Cho, Jong-Young Lee, Jennie Z. Ma, Thomas J. Payne, Ming D. Li, Taesung Park
Hum Genet. Author manuscript; available in PMC 2014 Dec 24.
Published in final edited form as: Hum Genet. 2012 Jun; 131(6): 1009–1021. Published online 2011 Oct 18. doi: 10.1007/s00439-011-1102-x
PMCID:
PMC4275569
AbstractArticlePDF–1.1M
6.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
7.
Regulation of Abro1/KIAA0157 during myocardial infarction and cell death reveals a novel cardioprotective mechanism for Lys63-specific deubiquitination
Lucia Cilenti, Meenakshi P. Balakrishnan, Xiao-Liang Wang, Camilla Ambivero, Martin Sterlicchi, Federica del Monte, Xin L. Ma, Antonis S. Zervos
J Mol Cell Cardiol. Author manuscript; available in PMC 2012 Apr 1.
Published in final edited form as: J Mol Cell Cardiol. 2011 Apr; 50(4): 652–661. Published online 2010 Dec 30. doi: 10.1016/j.yjmcc.2010.12.015
PMCID:
PMC3057332
AbstractArticlePDF–538K
8.
THAP5 is a DNA binding transcriptional repressor that is regulated in melanoma cells during DNA damage-induced cell death
Meenakshi P. Balakrishnan, Lucia Cilenti, Camilla Ambivero, Yamafumi Goto, Minoru Takata, James Turkson, Xiaoman Shawn Li, Antonis S. Zervos
Biochem Biophys Res Commun. Author manuscript; available in PMC 2012 Jan 7.
Published in final edited form as: Biochem Biophys Res Commun. 2011 Jan 7; 404(1): 195–200. Published online 2010 Nov 24. doi: 10.1016/j.bbrc.2010.11.092
PMCID:
PMC3034447
AbstractArticlePDF–1.1M
9.
Generalist genes analysis of DNA markers associated with mathematical ability and disability reveals shared influence across ages and abilities
Sophia J Docherty, Yulia Kovas, Stephen A Petrill, Robert Plomin
BMC Genet. 2010; 11: 61. Published online 2010 Jul 5. doi: 10.1186/1471-2156-11-61
PMCID:
PMC2909150
AbstractArticlePDF–587K
10.
Human Chromosome 7: DNA Sequence and Biology
Stephen W. Scherer, Joseph Cheung, Jeffrey R. MacDonald, Lucy R. Osborne, Kazuhiko Nakabayashi, Jo-Anne Herbrick, Andrew R. Carson, Layla Parker-Katiraee, Jennifer Skaug, Razi Khaja, Junjun Zhang, Alexander K. Hudek, Martin Li, May Haddad, Gavin E. Duggan, Bridget A. Fernandez, Emiko Kanematsu, Simone Gentles, Constantine C. Christopoulos, Sanaa Choufani, Dorota Kwasnicka, Xiangqun H. Zheng, Zhongwu Lai, Deborah Nusskern, Qing Zhang, Zhiping Gu, Fu Lu, Susan Zeesman, Malgorzata J. Nowaczyk, Ikuko Teshima, David Chitayat, Cheryl Shuman, Rosanna Weksberg, Elaine H. Zackai, Theresa A. Grebe, Sarah R. Cox, Susan J. Kirkpatrick, Nazneen Rahman, Jan M. Friedman, Henry H. Q. Heng, Pier Giuseppe Pelicci, Francesco Lo-Coco, Elena Belloni, Lisa G. Shaffer, Barbara Pober, Cynthia C. Morton, James F. Gusella, Gail A. P. Bruns, Bruce R. Korf, Bradley J. Quade, Azra H. Ligon, Heather Ferguson, Anne W. Higgins, Natalia T. Leach, Steven R. Herrick, Emmanuelle Lemyre, Chantal G. Farra, Hyung-Goo Kim, Anne M. Summers, Karen W. Gripp, Wendy Roberts, Peter Szatmari, Elizabeth J. T. Winsor, Karl-Heinz Grzeschik, Ahmed Teebi, Berge A. Minassian, Juha Kere, Lluis Armengol, Miguel Angel Pujana, Xavier Estivill, Michael D. Wilson, Ben F. Koop, Sabrina Tosi, Gudrun E. Moore, Andrew P. Boright, Eitan Zlotorynski, Batsheva Kerem, Peter M. Kroisel, Erwin Petek, David G. Oscier, Sarah J. Mould, Hartmut Döhner, Konstanze Döhner, Johanna M. Rommens, John B. Vincent, J. Craig Venter, Peter W. Li, Richard J. Mural, Mark D. Adams, Lap-Chee Tsui
Science. Author manuscript; available in PMC 2010 Jun 9.
Published in final edited form as: Science. 2003 May 2; 300(5620): 767–772. Published online 2003 Apr 10. doi: 10.1126/science.1083423
PMCID:
PMC2882961
AbstractArticlePDF–1.2M
11.
THAP5 is a human cardiac-specific inhibitor of cell cycle that is cleaved by the proapoptotic Omi/HtrA2 protease during cell death
Meenakshi P. Balakrishnan, Lucia Cilenti, Zineb Mashak, Paiyal Popat, Emad S. Alnemri, Antonis S. Zervos
Am J Physiol Heart Circ Physiol. 2009 Aug; 297(2): H643–H653. Published online 2009 Jun 5. doi: 10.1152/ajpheart.00234.2009
PMCID:
PMC2724199
AbstractArticle
12.
Functional Proteomics Mapping of a Human Signaling Pathway
Frédéric Colland, Xavier Jacq, Virginie Trouplin, Christelle Mougin, Caroline Groizeleau, Alexandre Hamburger, Alain Meil, Jérôme Wojcik, Pierre Legrain, Jean-Michel Gauthier
Genome Res. 2004 Jul; 14(7): 1324–1332. doi: 10.1101/gr.2334104
PMCID:
PMC442148
AbstractArticlePDF–290K
13.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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