PMC Links for GEO Profiles (Select 102848950) - PMC

Select item 87690721.

Proteome‐scale mapping of binding sites in the unstructured regions of the human proteome

Caroline Benz, Muhammad Ali, Izabella Krystkowiak, Leandro Simonetti, Ahmed Sayadi, Filip Mihalic, Johanna Kliche, Eva Andersson, Per Jemth, Norman E Davey, Ylva Ivarsson

Mol Syst Biol. 2022 Jan; 18(1): e10584. Published online 2022 Jan 19. doi: 10.15252/msb.202110584

PMCID:: PMC8769072

Abstract Article PDF–2.9M

Select item 81650302.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 80090483.

Impact of cytosine methylation on DNA binding specificities of human transcription factors

Yimeng Yin, Ekaterina Morgunova, Arttu Jolma, Eevi Kaasinen, Biswajyoti Sahu, Syed Khund-Sayeed, Pratyush K. Das, Teemu Kivioja, Kashyap Dave, Fan Zhong, Kazuhiro R. Nitta, Minna Taipale, Alexander Popov, Paul A. Ginno, Silvia Domcke, Jian Yan, Dirk Schübeler, Charles Vinson, Jussi Taipale

Science. Author manuscript; available in PMC 2021 Mar 30.

Published in final edited form as: Science. 2017 May 5; 356(6337): eaaj2239. doi: 10.1126/science.aaj2239

PMCID:: PMC8009048

Abstract Article PDF–2.6M

Select item 75832464.

CUX2, BRAP and ALDH2 are associated with metabolic traits in people with excessive alcohol consumption

I-Chun Chen, Po-Hsiu Kuo, Albert C. Yang, Shih-Jen Tsai, Tung-Hsia Liu, Hung-Jen Liu, Tsuo-Hung Lan, Hong-Ming Chen, Huang-Nan Huang, Ren-Hua Chung, Yu-Li Liu

Sci Rep. 2020; 10: 18118. Published online 2020 Oct 22. doi: 10.1038/s41598-020-75199-y

PMCID:: PMC7583246

Abstract Article PDF–1.7M

Select item 61666825.

Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei

Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck

Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924

PMCID:: PMC6166682

Abstract Article PDF–3.8M

Select item 61173496.

A recurrent de novo CUX2 missense variant associated with intellectual disability, seizures, and autism spectrum disorder

Maria Barington, Lotte Risom, Jakob Ek, Peter Uldall, Elsebet Ostergaard

Eur J Hum Genet. 2018 Sep; 26(9): 1388–1391. Published online 2018 May 24. doi: 10.1038/s41431-018-0184-5

PMCID:: PMC6117349

Abstract Article PDF–297K

Select item 60212187.

The epilepsy phenotypic spectrum associated with a recurrent CUX2 variant

Nicolas Chatron, Rikke S. Møller, Neena L. Champaigne, Amy L. Schneider MGenCouns, Alma Kuechler, Audrey Labalme, Thomas Simonet, Lauren Baggett, Claire Bardel, Erik-Jan Kamsteeg, Rolph Pfundt, Corrado Romano, Johan Aronsson, Antonino Alberti, Mirella Vinci, Maria J. Miranda, Amy Lacroix, Dragan Marjanovic, Vincent des Portes, Patrick Edery, Dagmar Wieczorek, Elena Gardella, Ingrid E. Scheffer, Heather Mefford, Damien Sanlaville, Gemma L. Carvill, Gaetan Lesca

Ann Neurol. Author manuscript; available in PMC 2019 May 1.

Published in final edited form as: Ann Neurol. 2018 May; 83(5): 926–934. Published online 2018 Apr 30. doi: 10.1002/ana.25222

PMCID:: PMC6021218

Abstract Article PDF–1.5M

Select item 58185338.

Genomic Variants in NEURL, GJA1 and CUX2 Significantly Increase Genetic Susceptibility to Atrial Fibrillation

Pengxia Wang, Weixi Qin, Pengyun Wang, Yufeng Huang, Ying Liu, Rongfeng Zhang, Sisi Li, Qin Yang, Xiaojing Wang, Feifei Chen, Jingqiu Liu, Bo Yang, Xiang Cheng, Yuhua Liao, Yanxia Wu, Tie Ke, Xin Tu, Xiang Ren, Yanzong Yang, Yunlong Xia, Xiaoping Luo, Mugen Liu, He Li, Jingyu Liu, Yi Xiao, Qiuyun Chen, Chengqi Xu, Qing K. Wang

Sci Rep. 2018; 8: 3297. Published online 2018 Feb 19. doi: 10.1038/s41598-018-21611-7

PMCID:: PMC5818533

Abstract Article PDF–1.2M

Select item 45662279.

CUX2 Protein Functions as an Accessory Factor in the Repair of Oxidative DNA Damage

Ranjana Pal, Zubaidah M. Ramdzan, Simran Kaur, Philippe M. Duquette, Richard Marcotte, Lam Leduy, Sayeh Davoudi, Nathalie Lamarche-Vane, Angelo Iulianella, Alain Nepveu

J Biol Chem. 2015 Sep 11; 290(37): 22520–22531. Published online 2015 Jul 28. doi: 10.1074/jbc.M115.651042

PMCID:: PMC4566227

Abstract Article PDF–627K

Select item 337626810.

1000 Genomes-based imputation identifies novel and refined associations for the Wellcome Trust Case Control Consortium phase 1 Data

Jie Huang, David Ellinghaus, Andre Franke, Bryan Howie, Yun Li

Eur J Hum Genet. 2012 Jul; 20(7): 801–805. Published online 2012 Feb 1. doi: 10.1038/ejhg.2012.3

PMCID:: PMC3376268

Abstract Article PDF–326K

Select item 317805911.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 293473912.

High-density SNP association study and copy number variation analysis of the AUTS1 and AUTS5 loci implicate the IMMP2L–DOCK4 gene region in autism susceptibility

E Maestrini, A T Pagnamenta, J A Lamb, E Bacchelli, N H Sykes, I Sousa, C Toma, G Barnby, H Butler, L Winchester, T S Scerri, F Minopoli, J Reichert, G Cai, J D Buxbaum, O Korvatska, G D Schellenberg, G Dawson, A de Bildt, R B Minderaa, E J Mulder, A P Morris, A J Bailey, A P Monaco, IMGSAC

Mol Psychiatry. 2010 Sep; 15(9): 954–968. Published online 2009 Apr 28. doi: 10.1038/mp.2009.34

PMCID:: PMC2934739

Abstract Article PDF–376K

Select item 290133613.

Maternal Genes and Facial Clefts in Offspring: A Comprehensive Search for Genetic Associations in Two Population-Based Cleft Studies from Scandinavia

Astanand Jugessur, Min Shi, Håkon Kristian Gjessing, Rolv Terje Lie, Allen James Wilcox, Clarice Ring Weinberg, Kaare Christensen, Abee Lowman Boyles, Sandra Daack-Hirsch, Truc Trung Nguyen, Lene Christiansen, Andrew Carl Lidral, Jeffrey Clark Murray

PLoS One. 2010; 5(7): e11493. Published online 2010 Jul 9. doi: 10.1371/journal.pone.0011493

PMCID:: PMC2901336

Abstract Article PDF–778K

Select item 263705014.

Large-Scale Proteomics and Phosphoproteomics of Urinary Exosomes

Patricia A. Gonzales, Trairak Pisitkun, Jason D. Hoffert, Dmitry Tchapyjnikov, Robert A. Star, Robert Kleta, Nam Sun Wang, Mark A. Knepper

J Am Soc Nephrol. 2009 Feb; 20(2): 363–379. doi: 10.1681/ASN.2008040406

PMCID:: PMC2637050

Abstract Article

Select item 13924115.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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