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Items: 1 to 20 of 34

1.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
2.
Molecular basis for Nse5-6 mediated regulation of Smc5/6 functions
Shibai Li, You Yu, Jian Zheng, Victoria Miller-Browne, Zheng Ser, Huihui Kuang, Dinshaw J. Patel, Xiaolan Zhao
Proc Natl Acad Sci U S A. 2023 Nov 7; 120(45): e2310924120. Published online 2023 Oct 30. doi: 10.1073/pnas.2310924120
PMCID:
PMC10636319
AbstractArticlePDF–3.2M
3.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
4.
The Smc5/6 complex is a DNA loop-extruding motor
Biswajit Pradhan, Takaharu Kanno, Miki Umeda Igarashi, Mun Siong Loke, Martin Dieter Baaske, Jan Siu Kei Wong, Kristian Jeppsson, Camilla Björkegren, Eugene Kim
Nature. 2023; 616(7958): 843–848. Published online 2023 Apr 19. doi: 10.1038/s41586-023-05963-3
PMCID:
PMC10132971
AbstractArticlePDF–5.8M
5.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
6.
Cryo-EM structure of DNA-bound Smc5/6 reveals DNA clamping enabled by multi-subunit conformational changes
You Yu, Shibai Li, Zheng Ser, Huihui Kuang, Thane Than, Danying Guan, Xiaolan Zhao, Dinshaw J. Patel
Proc Natl Acad Sci U S A. 2022 Jun 7; 119(23): e2202799119. Published online 2022 Jun 1. doi: 10.1073/pnas.2202799119
PMCID:
PMC9191643
AbstractArticlePDF–4.1M
7.
Structural basis for the E3 ligase activity enhancement of yeast Nse2 by SUMO-interacting motifs
Nathalia Varejão, Jara Lascorz, Joan Codina-Fabra, Gemma Bellí, Helena Borràs-Gas, Jordi Torres-Rosell, David Reverter
Nat Commun. 2021; 12: 7013. Published online 2021 Dec 1. doi: 10.1038/s41467-021-27301-9
PMCID:
PMC8636563
AbstractArticlePDF–3.6M
8.
Nse5/6 inhibits the Smc5/6 ATPase and modulates DNA substrate binding
Michael Taschner, Jérôme Basquin, Barbara Steigenberger, Ingmar B Schäfer, Young‐Min Soh, Claire Basquin, Esben Lorentzen, Markus Räschle, Richard A Scheltema, Stephan Gruber
EMBO J. 2021 Aug 2; 40(15): e107807. Published online 2021 Jun 30. doi: 10.15252/embj.2021107807
PMCID:
PMC8327961
AbstractArticlePDF–5.6M
9.
Integrative analysis reveals unique structural and functional features of the Smc5/6 complex
You Yu, Shibai Li, Zheng Ser, Tanmoy Sanyal, Koyi Choi, Bingbing Wan, Huihui Kuang, Andrej Sali, Alex Kentsis, Dinshaw J. Patel, Xiaolan Zhao
Proc Natl Acad Sci U S A. 2021 May 11; 118(19): e2026844118. Published online 2021 May 3. doi: 10.1073/pnas.2026844118
PMCID:
PMC8126833
AbstractArticlePDF–2.3M
10.
Nse5/6 is a negative regulator of the ATPase activity of the Smc5/6 complex
Stephen T Hallett, Pascale Schellenberger, Lihong Zhou, Fabienne Beuron, Ed Morris, Johanne M Murray, Antony W Oliver
Nucleic Acids Res. 2021 May 7; 49(8): 4534–4549. Published online 2021 Apr 13. doi: 10.1093/nar/gkab234
PMCID:
PMC8096239
AbstractArticlePDF–5.3M
11.
Purified Smc5/6 Complex Exhibits DNA Substrate Recognition and Compaction
Pilar Gutierrez-Escribano, Silvia Hormeño, Julene Madariaga-Marcos, Roger Solé-Soler, Francis J. O’Reilly, Kyle Morris, Clara Aicart-Ramos, Ricardo Aramayo, Alex Montoya, Holger Kramer, Juri Rappsilber, Jordi Torres-Rosell, Fernando Moreno-Herrero, Luis Aragon
Mol Cell. 2020 Dec 17; 80(6): 1039–1054.e6. doi: 10.1016/j.molcel.2020.11.012
PMCID:
PMC7758880
AbstractArticle
12.
Molecular basis for control of diverse genome stability factors by the multi-BRCT scaffold Rtt107
Bingbing Wan, Jian Wu, Xiangzhou Meng, Ming Lei, Xiaolan Zhao
Mol Cell. Author manuscript; available in PMC 2020 Jul 25.
Published in final edited form as: Mol Cell. 2019 Jul 25; 75(2): 238–251.e5. Published online 2019 Jul 16. doi: 10.1016/j.molcel.2019.05.035
PMCID:
PMC6745058
AbstractArticlePDF–3.1M
13.
Global analysis of genetic circuitry and adaptive mechanisms enabling resistance to the azole antifungal drugs
Harley O’Connor Mount, Nicole M. Revie, Robert T. Todd, Kaitlin Anstett, Cathy Collins, Michael Costanzo, Charles Boone, Nicole Robbins, Anna Selmecki, Leah E. Cowen
PLoS Genet. 2018 Apr; 14(4): e1007319. Published online 2018 Apr 27. doi: 10.1371/journal.pgen.1007319
PMCID:
PMC5922528
AbstractArticlePDF–7.1M
14.
Acute Smc5/6 depletion reveals its primary role in rDNA replication by restraining recombination at fork pausing sites
Xiao P. Peng, Shelly Lim, Shibai Li, Lisette Marjavaara, Andrei Chabes, Xiaolan Zhao
PLoS Genet. 2018 Jan; 14(1): e1007129. Published online 2018 Jan 23. doi: 10.1371/journal.pgen.1007129
PMCID:
PMC5779651
AbstractArticlePDF–5.3M
15.
Exploring Quantitative Yeast Phenomics with Single Cell Analysis of DNA Damage Foci
Erin B. Styles, Karen J. Founk, Lee A. Zamparo, Tina L. Sing, Dogus Altintas, Cyril Ribeyre, Virginie Ribaud, Jacques Rougemont, David Mayhew, Michael Costanzo, Matej Usaj, Adrian J. Verster, Elizabeth N. Koch, Daniele Novarina, Marco Graf, Brian Luke, Marco Muzi-Falconi, Chad L. Myers, Robi David Mitra, David Shore, Grant W. Brown, Zhaolei Zhang, Charles Boone, Brenda J. Andrews
Cell Syst. Author manuscript; available in PMC 2017 Nov 16.
Published in final edited form as: Cell Syst. 2016 Sep 28; 3(3): 264–277.e10. Published online 2016 Sep 8. doi: 10.1016/j.cels.2016.08.008
PMCID:
PMC5689480
AbstractArticlePDF–2.9M
16.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
17.
Architecture and dynamics of overlapped RNA regulatory networks
Christopher P. Lapointe, Melanie A. Preston, Daniel Wilinski, Harriet A.J. Saunders, Zachary T. Campbell, Marvin Wickens
RNA. 2017 Nov; 23(11): 1636–1647. doi: 10.1261/rna.062687.117
PMCID:
PMC5648032
AbstractArticlePDF–6.6M
18.
Incision of damaged DNA in the presence of an impaired Smc5/6 complex imperils genome stability
Jie Peng, Wenyi Feng
Nucleic Acids Res. 2016 Dec 1; 44(21): 10216–10229. Published online 2016 Aug 17. doi: 10.1093/nar/gkw720
PMCID:
PMC5137426
AbstractArticlePDF–6.6M
19.
Smc5/6 Mediated Sumoylation of the Sgs1-Top3-Rmi1 Complex Promotes Removal of Recombination Intermediates
Jacob N. Bonner, Koyi Choi, Xiaoyu Xue, Nikko P. Torres, Barnabas Szakal, Lei Wei, Bingbing Wan, Meret Arter, Joao Matos, Patrick Sung, Grant W. Brown, Dana Branzei, Xiaolan Zhao
Cell Rep. Author manuscript; available in PMC 2017 Jul 12.
Published in final edited form as: Cell Rep. 2016 Jul 12; 16(2): 368–378. Published online 2016 Jun 30. doi: 10.1016/j.celrep.2016.06.015
PMCID:
PMC5051638
AbstractArticlePDF–805K
20.
Non-Smc element 5 (Nse5) of the Smc5/6 complex interacts with SUMO pathway components
Denise E. Bustard, Lindsay G. Ball, Jennifer A. Cobb
Biol Open. 2016 Jun 15; 5(6): 777–785. Published online 2016 May 23. doi: 10.1242/bio.018440
PMCID:
PMC4920195
AbstractArticlePDF–2.2M

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