PMC Links for GEO Profiles (Select 104125238) - PMC

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 28952504.

Structural basis for the negative regulation of bacterial stress response by RseB

Dong Young Kim, Eunju Kwon, JongKeun Choi, Hye-Yeon Hwang, Kyeong Kyu Kim

Protein Sci. 2010 Jun; 19(6): 1258–1263. Published online 2010 Mar 29. doi: 10.1002/pro.393

PMCID:: PMC2895250

Abstract Article PDF–439K

Select item 27645475.

OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism

Jungsan Sohn, Robert A. Grant, Robert T. Sauer

Structure. Author manuscript; available in PMC 2010 Oct 14.

Published in final edited form as: Structure. 2009 Oct 14; 17(10): 1411–1421. doi: 10.1016/j.str.2009.07.017

PMCID:: PMC2764547

Abstract Article PDF–2.4M

Select item 27364476.

Cleavage of RseA by RseP requires a carboxyl-terminal hydrophobic amino acid following DegS cleavage

Xiaochun Li, Boyuan Wang, Lihui Feng, Hui Kang, Yang Qi, Jiawei Wang, Yigong Shi

Proc Natl Acad Sci U S A. 2009 Sep 1; 106(35): 14837–14842. Published online 2009 Aug 17. doi: 10.1073/pnas.0903289106

PMCID:: PMC2736447

Abstract Article PDF–1.6M

Select item 27364217.

Rip exposed: How ectodomain shedding regulates the proteolytic processing of transmembrane substrates

Daniel R. Dries, Gang Yu

Proc Natl Acad Sci U S A. 2009 Sep 1; 106(35): 14737–14738. Published online 2009 Aug 26. doi: 10.1073/pnas.0908124106

PMCID:: PMC2736421

Article PDF–132K

Select item 26434908.

Analyzing the Interaction of RseA and RseB, the Two Negative Regulators of the σ^E Envelope Stress Response, Using a Combined Bioinformatic and Experimental Strategy

Nidhi Ahuja, Dmitry Korkin, Rachna Chaba, Brent O. Cezairliyan, Robert T. Sauer, Kyeong Kyu Kim, Carol A. Gross

J Biol Chem. 2009 Feb 20; 284(8): 5403–5413. doi: 10.1074/jbc.M806012200

PMCID:: PMC2643490

Abstract Article PDF–983K

Select item 23947979.

Solution structures of RseA and its complex with RseB

Kyeong Sik Jin, Dong Young Kim, Yecheol Rho, Van Binh Le, Eunju Kwon, Kyeong Kyu Kim, Moonhor Ree

J Synchrotron Radiat. 2008 May 1; 15(Pt 3): 219–222. Published online 2008 Apr 18. doi: 10.1107/S0909049507066319

PMCID:: PMC2394797

Abstract Article PDF–500K

Select item 191339710.

σ^E Regulates and Is Regulated by a Small RNA in Escherichia coli

Karl M. Thompson, Virgil A. Rhodius, Susan Gottesman

J Bacteriol. 2007 Jun; 189(11): 4243–4256. Published online 2007 Apr 6. doi: 10.1128/JB.00020-07

PMCID:: PMC1913397

Abstract Article PDF–390K

Select item 188557911.

Crystal structure of RseB and a model of its binding mode to RseA

Dong Young Kim, Kyeong Sik Jin, Eunju Kwon, Moonhor Ree, Kyeong Kyu Kim

Proc Natl Acad Sci U S A. 2007 May 22; 104(21): 8779–8784. Published online 2007 May 11. doi: 10.1073/pnas.0703117104

PMCID:: PMC1885579

Abstract Article PDF–2.3M

Select item 182065912.

Inhibition of regulated proteolysis by RseB

Brent O. Cezairliyan, Robert T. Sauer

Proc Natl Acad Sci U S A. 2007 Mar 6; 104(10): 3771–3776. Published online 2007 Feb 26. doi: 10.1073/pnas.0611567104

PMCID:: PMC1820659

Abstract Article PDF–559K

Select item 175989713.

Design principles of the proteolytic cascade governing the σ^E-mediated envelope stress response in Escherichia coli: keys to graded, buffered, and rapid signal transduction

Rachna Chaba, Irina L. Grigorova, Julia M. Flynn, Tania A. Baker, Carol A. Gross

Genes Dev. 2007 Jan 1; 21(1): 124–136. doi: 10.1101/gad.1496707

PMCID:: PMC1759897

Abstract Article PDF–520K

Select item 168148114.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 154005015.

Outer Membrane Vesicle Production by Escherichia coli Is Independent of Membrane Instability

Amanda J. McBroom, Alexandra P. Johnson, Sreekanth Vemulapalli, Meta J. Kuehn

J Bacteriol. 2006 Aug; 188(15): 5385–5392. doi: 10.1128/JB.00498-06

PMCID:: PMC1540050

Abstract Article PDF–241K

Select item 132520016.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405