PMC Links for GEO Profiles (Select 105382731) - PMC

D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus

Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0

PMCID:: PMC10917660

Abstract Article PDF–4.8M

Select item 107693504.

Identification of new ciliary signaling pathways in the brain and insights into neurological disorders

Abdelhalim Loukil, Emma Ebright, Akiyoshi Uezu, Yudong Gao, Scott H Soderling, Sarah C. Goetz

Version 1. bioRxiv. Preprint. 2023 Dec 21. doi: 10.1101/2023.12.20.572700

PMCID:: PMC10769350

Abstract Article PDF–11M

Select item 65388535.

A Role for Sensory end Organ-Derived Signals in Regulating Muscle Spindle Proprioceptor Phenotype

Dawei Wu, Ira Schieren, Yingzhi Qian, Chaolin Zhang, Thomas M. Jessell, Joriene C. de Nooij

J Neurosci. 2019 May 29; 39(22): 4252–4267. doi: 10.1523/JNEUROSCI.2671-18.2019

PMCID:: PMC6538853

Abstract Article PDF–6.3M

Select item 56450826.

Spatio-temporal profile of postynaptic interactomes integrates components of complex brain disorders

Jing Li, Wangshu Zhang, Hui Yang, Daniel P. Howrigan, Brent Wilkinson, Tade Souaiaia, Oleg V. Evgrafov, Giulio Genovese, Veronica A. Clementel, Jennifer C. Tudor, Ted Abel, James A. Knowles, Benjamin M. Neale, Kai Wang, Fengzhu Sun, Marcelo P. Coba

Nat Neurosci. Author manuscript; available in PMC 2018 Aug 1.

Published in final edited form as: Nat Neurosci. 2017 Aug; 20(8): 1150–1161. Published online 2017 Jun 26. doi: 10.1038/nn.4594

PMCID:: PMC5645082

Abstract Article PDF–2.3M

Select item 53120377.

PAPC couples the segmentation clock to somite morphogenesis by regulating N-cadherin-dependent adhesion

Jérome Chal, Charlène Guillot, Olivier Pourquié

Development. 2017 Feb 15; 144(4): 664–676. doi: 10.1242/dev.143974

PMCID:: PMC5312037

Abstract Article

Select item 35415308.

The microRNA-processing enzyme DICER is dispensable for somite segmentation but essential for limb bud positioning

Zhen Zhang, Jason R. O’Rourke, Michael T. McManus, Mark Lewandoski, Brian D. Harfe, Xin Sun

Dev Biol. Author manuscript; available in PMC 2013 Jan 10.

Published in final edited form as: Dev Biol. 2011 Mar 15; 351(2): 254–265. Published online 2011 Jan 20. doi: 10.1016/j.ydbio.2011.01.005

PMCID:: PMC3541530

Abstract Article PDF–5.0M

Select item 31780599.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 317347210.

Fuz Regulates Craniofacial Development through Tissue Specific Responses to Signaling Factors

Zichao Zhang, Bogdan J. Wlodarczyk, Karen Niederreither, Shankar Venugopalan, Sergio Florez, Richard H. Finnell, Brad A. Amendt

PLoS One. 2011; 6(9): e24608. Published online 2011 Sep 14. doi: 10.1371/journal.pone.0024608

PMCID:: PMC3173472

Abstract Article PDF–4.0M

Select item 316757311.

Developmental Profiling of Spiral Ganglion Neurons Reveals Insights into Auditory Circuit Assembly

Cindy C. Lu, Jessica M. Appler, E. Andres Houseman, Lisa V. Goodrich

J Neurosci. 2011 Jul 27; 31(30): 10903–10918. doi: 10.1523/JNEUROSCI.2358-11.2011

PMCID:: PMC3167573

Abstract Article PDF–2.1M

Select item 302253412.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 291995013.

Tbr1 regulates regional and laminar identity of postmitotic neurons in developing neocortex

Francesco Bedogni, Rebecca D. Hodge, Gina E. Elsen, Branden R. Nelson, Ray A. M. Daza, Richard P. Beyer, Theo K. Bammler, John L. R. Rubenstein, Robert F. Hevner

Proc Natl Acad Sci U S A. 2010 Jul 20; 107(29): 13129–13134. Published online 2010 Jul 6. doi: 10.1073/pnas.1002285107

PMCID:: PMC2919950

Abstract Article PDF–1.2M

Select item 280541114.

Retinoic-acid signalling in node ectoderm and posterior neural plate directs left–right patterning of somitic mesoderm

Ioan Ovidiu Sirbu, Gregg Duester

Nat Cell Biol. Author manuscript; available in PMC 2010 Jan 12.

Published in final edited form as: Nat Cell Biol. 2006 Mar; 8(3): 271–277. Published online 2006 Feb 19. doi: 10.1038/ncb1374

PMCID:: PMC2805411

Abstract Article PDF–2.7M

Select item 266281715.

Global comparative transcriptome analysis of cartilage formation in vivo

Trevor L Cameron, Daniele Belluoccio, Peter G Farlie, Bent Brachvogel, John F Bateman

BMC Dev Biol. 2009; 9: 20. Published online 2009 Mar 10. doi: 10.1186/1471-213X-9-20

PMCID:: PMC2662817

Abstract Article PDF–1.3M

Select item 263784816.

Notch signalling in the paraxial mesoderm is most sensitive to reduced Pofut1 levels during early mouse development

Karin Schuster-Gossler, Belinda Harris, Kenneth R Johnson, Jürgen Serth, Achim Gossler

BMC Dev Biol. 2009; 9: 6. Published online 2009 Jan 22. doi: 10.1186/1471-213X-9-6

PMCID:: PMC2637848

Abstract Article PDF–4.6M

Select item 242428417.

Activity-Induced Protocadherin Arcadlin Regulates Dendritic Spine Number by Triggering N-Cadherin Endocytosis via TAO2β and p38 MAP Kinases

Shin Yasuda, Hidekazu Tanaka, Hiroko Sugiura, Ko Okamura, Taiki Sakaguchi, Uyen Tran, Takako Takemiya, Akira Mizoguchi, Yoshiki Yagita, Takeshi Sakurai, E.M. De Robertis, Kanato Yamagata

Neuron. Author manuscript; available in PMC 2008 Nov 8.

Published in final edited form as: Neuron. 2007 Nov 8; 56(3): 456–471. doi: 10.1016/j.neuron.2007.08.020

PMCID:: PMC2424284

Abstract Article PDF–1.9M

Select item 209925918.

Effects of thioredoxin reductase-1 deletion on embryogenesis and transcriptome

Alla A. Bondareva, Mario R. Capecchi, Sonya V. Iverson, Yan Li, Nathan I. Lopez, Olivier Lucas, Gary F. Merrill, Justin R. Prigge, Ashley M. Siders, Maki Wakamiya, Stephanie L. Wallin, Edward E. Schmidt

Free Radic Biol Med. Author manuscript; available in PMC 2007 Nov 29.

Published in final edited form as: Free Radic Biol Med. 2007 Sep 15; 43(6): 911–923. Published online 2007 May 31. doi: 10.1016/j.freeradbiomed.2007.05.026

PMCID:: PMC2099259

Abstract Article PDF–1.0M

Select item 31099219.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098020.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

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