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Items: 1 to 20 of 28

1.
Integrative transcriptomic profiling of ncRNAs and mRNAs in developing mouse lens
Liyun Zhang, Xin Liu, Wei Li, Kaiqing Liu, Jing Zhang, Xinhua Liu, Jiantao Wang
Front Genet. 2024; 15: 1405715. Published online 2024 Jun 12. doi: 10.3389/fgene.2024.1405715
PMCID:
PMC11199715
AbstractArticlePDF–5.9M
2.
Atypical heat shock transcription factor HSF5 is critical for male meiotic prophase under non-stress conditions
Saori Yoshimura, Ryuki Shimada, Koji Kikuchi, Soichiro Kawagoe, Hironori Abe, Sakie Iisaka, Sayoko Fujimura, Kei-ichiro Yasunaga, Shingo Usuki, Naoki Tani, Takashi Ohba, Eiji Kondoh, Tomohide Saio, Kimi Araki, Kei-ichiro Ishiguro
Nat Commun. 2024; 15: 3330. Published online 2024 Apr 29. doi: 10.1038/s41467-024-47601-0
PMCID:
PMC11059408
AbstractArticlePDF–8.4M
3.
Genetic determinants of micronucleus formation in vivo
D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus
Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0
PMCID:
PMC10917660
AbstractArticlePDF–4.8M
4.
HSF4 Transcriptionally Activates Autophagy by Regulating ATG9a During Lens Terminal Differentiation
Jing Zhang, Ning Jiang, Chunxiao Du, Hongzan Guo, Ranqi Meng, Xinyu Hou, Mugen Liu, Yanzhong Hu, Xiukun Cui
Invest Ophthalmol Vis Sci. 2023 Jun; 64(7): 5. Published online 2023 Jun 2. doi: 10.1167/iovs.64.7.5
PMCID:
PMC10243497
AbstractArticlePDF–4.9M
5.
The aging mouse lens transcriptome
Adam P. Faranda, Mahbubul H. Shihan, Yan Wang, Melinda K. Duncan
Exp Eye Res. Author manuscript; available in PMC 2022 Aug 1.
Published in final edited form as: Exp Eye Res. 2021 Aug; 209: 108663. Published online 2021 Jun 11. doi: 10.1016/j.exer.2021.108663
PMCID:
PMC8720273
AbstractArticlePDF–1.8M
6.
Demyelination, Astrogliosis, and Accumulation of Ubiquitinated Proteins, Hallmarks of CNS Disease in hsf1-Deficient Mice
Sachiko Homma, Xiongjie Jin, Guanghu Wang, Naxin Tu, Jinna Min, Nathan Yanasak, Nahid F. Mivechi
J Neurosci. 2007 Jul 25; 27(30): 7974–7986. doi: 10.1523/JNEUROSCI.0006-07.2007
PMCID:
PMC6672719
AbstractArticlePDF–829K
7.
N-myc regulates growth and fiber cell differentiation in lens development
Gabriel R. Cavalheiro, Gabriel E. Matos-Rodrigues, Yilin Zhao, Anielle L. Gomes, Deepti Anand, Danilo Predes, Silmara de Lima, Jose G. Abreu, Deyou Zheng, Salil A. Lachke, Ales Cvekl, Rodrigo A. P. Martins
Dev Biol. Author manuscript; available in PMC 2017 Sep 6.
Published in final edited form as: Dev Biol. 2017 Sep 1; 429(1): 105–117. Published online 2017 Jul 14. doi: 10.1016/j.ydbio.2017.07.002
PMCID:
PMC5586101
AbstractArticlePDF–2.9M
8.
High-throughput discovery of novel developmental phenotypes
Mary E. Dickinson, Ann M. Flenniken, Xiao Ji, Lydia Teboul, Michael D. Wong, Jacqueline K. White, Terrence F. Meehan, Wolfgang J. Weninger, Henrik Westerberg, Hibret Adissu, Candice N. Baker, Lynette Bower, James M. Brown, L. Brianna Caddle, Francesco Chiani, Dave Clary, James Cleak, Mark J. Daly, James M. Denegre, Brendan Doe, Mary E. Dolan, Sarah M. Edie, Helmut Fuchs, Valerie Gailus-Durner, Antonella Galli, Alessia Gambadoro, Juan Gallegos, Shiying Guo, Neil R. Horner, Chih-wei Hsu, Sara J. Johnson, Sowmya Kalaga, Lance C. Keith, Louise Lanoue, Thomas N. Lawson, Monkol Lek, Manuel Mark, Susan Marschall, Jeremy Mason, Melissa L. McElwee, Susan Newbigging, Lauryl M.J. Nutter, Kevin A. Peterson, Ramiro Ramirez-Solis, Douglas J. Rowland, Edward Ryder, Kaitlin E. Samocha, John R. Seavitt, Mohammed Selloum, Zsombor Szoke-Kovacs, Masaru Tamura, Amanda G Trainor, Ilinca Tudose, Shigeharu Wakana, Jonathan Warren, Olivia Wendling, David B. West, Leeyean Wong, Atsushi Yoshiki, The International Mouse Phenotyping Consortium, Daniel G. MacArthur, Glauco P. Tocchini-Valentini, Xiang Gao, Paul Flicek, Allan Bradley, William C. Skarnes, Monica J. Justice, Helen E. Parkinson, Mark Moore, Sara Wells, Robert E. Braun, Karen L. Svenson, Martin Hrabe de Angelis, Yann Herault, Tim Mohun, Ann-Marie Mallon, R. Mark Henkelman, Steve D.M. Brown, David J. Adams, K.C. Kent Lloyd, Colin McKerlie, Arthur L. Beaudet, Maja Bucan, Stephen A. Murray
Nature. Author manuscript; available in PMC 2017 Mar 14.
Published in final edited form as: Nature. 2016 Sep 22; 537(7621): 508–514. Published online 2016 Sep 14. doi: 10.1038/nature19356
Correction in:
Nature. 2017 Nov 16; 551(7680): 398.
PMCID:
PMC5295821
AbstractArticlePDF–3.0M
9.
Chromatin remodeling enzyme Snf2h regulates embryonic lens differentiation and denucleation
Shuying He, Saima Limi, Rebecca S. McGreal, Qing Xie, Lisa A. Brennan, Wanda Lee Kantorow, Juraj Kokavec, Romit Majumdar, Harry Hou, Jr, Winfried Edelmann, Wei Liu, Ruth Ashery-Padan, Jiri Zavadil, Marc Kantorow, Arthur I. Skoultchi, Tomas Stopka, Ales Cvekl
Development. 2016 Jun 1; 143(11): 1937–1947. doi: 10.1242/dev.135285
PMCID:
PMC4920164
AbstractArticle
10.
Screening of potential target genes for cataract by analyzing mRNA expression profile of mouse Hsf4-null lens
Wenjuan Zhao, Wenqing Zhao, Jun Zhao, Dong Wang, Jinghai Li
BMC Ophthalmol. 2015; 15: 76. Published online 2015 Jul 18. doi: 10.1186/s12886-015-0066-3
PMCID:
PMC4506420
AbstractArticlePDF–961K
11.
Expression of the HSF4 DNA Binding Domain-EGFP Hybrid Gene Recreates Early Childhood Lamellar Cataract in Transgenic Mice
Rajendra K. Gangalum, Zhe Jing, Ankur M. Bhat, Josh Lee, Yoshiko Nagaoka, Sophie X. Deng, Meisheng Jiang, Suraj P. Bhat
Invest Ophthalmol Vis Sci. 2014 Nov; 55(11): 7227–7240. Published online 2014 Nov 13. doi: 10.1167/iovs.14-14594
PMCID:
PMC4231995
AbstractArticlePDF–1.4M
12.
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data
Gautier Koscielny, Gagarine Yaikhom, Vivek Iyer, Terrence F. Meehan, Hugh Morgan, Julian Atienza-Herrero, Andrew Blake, Chao-Kung Chen, Richard Easty, Armida Di Fenza, Tanja Fiegel, Mark Grifiths, Alan Horne, Natasha A. Karp, Natalja Kurbatova, Jeremy C. Mason, Peter Matthews, Darren J. Oakley, Asfand Qazi, Jack Regnart, Ahmad Retha, Luis A. Santos, Duncan J. Sneddon, Jonathan Warren, Henrik Westerberg, Robert J. Wilson, David G. Melvin, Damian Smedley, Steve D. M. Brown, Paul Flicek, William C. Skarnes, Ann-Marie Mallon, Helen Parkinson
Nucleic Acids Res. 2014 Jan 1; 42(Database issue): D802–D809. Published online 2013 Nov 3. doi: 10.1093/nar/gkt977
PMCID:
PMC3964955
AbstractArticlePDF–5.7M
13.
SKAP2, a novel target of HSF4b, associates with NCK2/F-actin at membrane ruffles and regulates actin reorganization in lens cell
Li Zhou, Zhenguo Zhang, Yufang Zheng, Yufei Zhu, Zejun Wei, Heng Xu, Quan Tang, Xiangyin Kong, Landian Hu
J Cell Mol Med. 2011 Apr; 15(4): 783–795. Published online 2010 Mar 9. doi: 10.1111/j.1582-4934.2010.01048.x
PMCID:
PMC3922667
AbstractArticlePDF–1.3M
14.
Inactivation of Heat Shock Factor Hsf4 Induces Cellular Senescence and Suppresses Tumorigenesis In Vivo
Xiongjie Jin, Binnur Eroglu, Wonkyoung Cho, Yukihiro Yamaguchi, Demetrius Moskophidis, Nahid F. Mivechi
Mol Cancer Res. Author manuscript; available in PMC 2013 Jun 24.
Published in final edited form as: Mol Cancer Res. 2012 Apr; 10(4): 523–534. Published online 2012 Feb 21. doi: 10.1158/1541-7786.MCR-11-0530
PMCID:
PMC3690822
AbstractArticlePDF–4.2M
15.
Cell-type-dependent access of HSF1 and HSF4 to αB-crystallin promoter during heat shock
Zhe Jing, Rajendra K. Gangalum, Josh Z. Lee, Dennis Mock, Suraj P. Bhat
Cell Stress Chaperones. 2013 May; 18(3): 377–387. Published online 2012 Dec 23. doi: 10.1007/s12192-012-0386-7
Correction in:
Cell Stress Chaperones. 2013 May; 18(3): 389–390.
PMCID:
PMC3631099
AbstractArticlePDF–817K
16.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
17.
Functional analysis of the Hsf4lop11 allele responsible for cataracts in lop11 mice
Lina Liang, Ryan Liegel, Brad Endres, Adam Ronchetti, Bo Chang, D.J. Sidjanin
Mol Vis. 2011; 17: 3062–3071. Published online 2011 Nov 23.
PMCID:
PMC3233385
AbstractArticlePDF–776K
18.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
19.
A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58
Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara
Dev Cell. Author manuscript; available in PMC 2011 Jun 7.
Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011
PMCID:
PMC3110151
AbstractArticlePDF–2.0M
20.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M

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