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Items: 1 to 20 of 25

1.
FOXA3 regulates cholesterol metabolism to compensate for low uptake during the progression of lung adenocarcinoma
Dongmei Wang, Yuxiang Cao, Meiyao Meng, Jin Qiu, Chao Ni, Xiaozhen Guo, Yu Li, Shuang Liu, Jian Yu, Mingwei Guo, Jiawen Wang, Bing Du, Wenwei Qiu, Cen Xie, Bing Zhao, Xinran Ma, Xinghua Cheng, Lingyan Xu
PLoS Biol. 2024 May; 22(5): e3002621. Published online 2024 May 28. doi: 10.1371/journal.pbio.3002621
PMCID:
PMC11161053
AbstractArticlePDF–4.2M
2.
Whole-exome sequencing identifies FOXL2, FOXA2 and FOXA3 as candidate genes for monogenic congenital anomalies of the kidneys and urinary tract
Bixia Zheng, Steve Seltzsam, Chunyan Wang, Luca Schierbaum, Sophia Schneider, Chen-Han Wilfred Wu, Rufeng Dai, Dervla M Connaughton, Makiko Nakayama, Nina Mann, Natasa Stajic, Shrikant Mane, Stuart B Bauer, Velibor Tasic, Hyun Joo Nam, Shirlee Shril, Friedhelm Hildebrandt
Nephrol Dial Transplant. 2022 Oct; 37(10): 1833–1843. Published online 2021 Sep 2. doi: 10.1093/ndt/gfab253
PMCID:
PMC9755999
AbstractArticlePDF–1.8M
3.
FOXA3 Polymorphisms Are Associated with Metabolic Parameters in Individuals with Subclinical Atherosclerosis and Healthy Controls—The GEA Mexican Study
Gilberto Vargas-Alarcón, José Manuel Fragoso, Julian Ramírez-Bello, Rosalinda Posadas-Sánchez
Biomolecules. 2022 May; 12(5): 601. Published online 2022 Apr 19. doi: 10.3390/biom12050601
PMCID:
PMC9139129
AbstractArticlePDF–511K
4.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
5.
Impact of cytosine methylation on DNA binding specificities of human transcription factors
Yimeng Yin, Ekaterina Morgunova, Arttu Jolma, Eevi Kaasinen, Biswajyoti Sahu, Syed Khund-Sayeed, Pratyush K. Das, Teemu Kivioja, Kashyap Dave, Fan Zhong, Kazuhiro R. Nitta, Minna Taipale, Alexander Popov, Paul A. Ginno, Silvia Domcke, Jian Yan, Dirk Schübeler, Charles Vinson, Jussi Taipale
Science. Author manuscript; available in PMC 2021 Mar 30.
Published in final edited form as: Science. 2017 May 5; 356(6337): eaaj2239. doi: 10.1126/science.aaj2239
PMCID:
PMC8009048
AbstractArticlePDF–2.6M
6.
Transcription factor FOXA3 promotes the development of Hepatoblastoma via regulating HNF1A, AFP, and ZFHX3 expression
Xiaoyun Zhan, Alan Zhao
J Clin Lab Anal. 2021 Mar; 35(3): e23686. Published online 2020 Dec 24. doi: 10.1002/jcla.23686
PMCID:
PMC7957975
AbstractArticlePDF–683K
7.
m6A RNA methylation-mediated HNF3γ reduction renders hepatocellular carcinoma dedifferentiation and sorafenib resistance
Tengfei Zhou, Shichao Li, Daimin Xiang, Junyu Liu, Wen Sun, Xiuliang Cui, Beifang Ning, Xiao Li, Zhuo Cheng, Weiqi Jiang, Cheng Zhang, Xijun Liang, Liang Li, Xin Cheng, Liu Hui, Hongyang Wang, Jin Ding
Signal Transduct Target Ther. 2020; 5: 296. Published online 2020 Dec 26. doi: 10.1038/s41392-020-00299-0
PMCID:
PMC7762754
AbstractArticlePDF–6.6M
8.
Opposing Roles of FoxA1 and FoxA3 in Intrahepatic Cholangiocarcinoma Progression
Raynoo Thanan, Waleeporn Kaewlert, Chadamas Sakonsinsiri, Timpika Chaiprasert, Napat Armartmuntree, Duangkamon Muengsaen, Anchalee Techasen, Poramate Klanrit, Worachart Lert-itthiporn, Somchai Pinlaor, Chawalit Pairojkul
Int J Mol Sci. 2020 Mar; 21(5): 1796. Published online 2020 Mar 5. doi: 10.3390/ijms21051796
PMCID:
PMC7084256
AbstractArticlePDF–2.2M
9.
Hepatic forkhead box protein A3 regulates ApoA-I expression, cholesterol efflux and atherogenesis
Yuanyuan Li, Yanyong Xu, Kavita Jadhav, Yingdong Zhu, Liya Yin, Yanqiao Zhang
Arterioscler Thromb Vasc Biol. Author manuscript; available in PMC 2020 Aug 1.
Published in final edited form as: Arterioscler Thromb Vasc Biol. 2019 Aug; 39(8): 1574–1587. Published online 2019 Jul 11. doi: 10.1161/ATVBAHA.119.312610
PMCID:
PMC6656627
AbstractArticlePDF–2.0M
10.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
11.
Analysis of variants and mutations in the human winged helix FOXA3 gene and associations with metabolic traits
D C Adler-Wailes, A T Alberobello, X Ma, L Hugendubler, E A Stern, Z Mou, J C Han, P W Kim, A E Sumner, J A Yanovski, E Mueller
Int J Obes (Lond) 2015 Jun; 39(6): 888–892. Prepublished online 2015 Feb 12. Published online 2015 Mar 3. doi: 10.1038/ijo.2015.17
PMCID:
PMC4462767
AbstractArticlePDF–433K
12.
Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes
Xu Li, Wenqi Wang, Jiadong Wang, Anna Malovannaya, Yuanxin Xi, Wei Li, Rudy Guerra, David H Hawke, Jun Qin, Junjie Chen
Mol Syst Biol. 2015 Jan; 11(1): 775. Published online 2015 Jan 21. doi: 10.15252/msb.20145504
PMCID:
PMC4332150
AbstractArticlePDF–2.8M
13.
Foxa3 Induces Goblet Cell Metaplasia and Inhibits Innate Antiviral Immunity
Gang Chen, Thomas R. Korfhagen, Christopher L. Karp, Soren Impey, Yan Xu, Scott H. Randell, Joseph Kitzmiller, Yutaka Maeda, Hans Michael Haitchi, Anusha Sridharan, Albert P. Senft, Jeffrey A. Whitsett
Am J Respir Crit Care Med. 2014 Feb 1; 189(3): 301–313. Published online 2014 Feb 1. doi: 10.1164/rccm.201306-1181OC
PMCID:
PMC3977731
AbstractArticlePDF–3.2M
14.
The Winged Helix Transcription Factor Foxa3 Regulates Adipocyte Differentiation and Depot-Selective Fat Tissue Expansion
Lingyan Xu, Valentine Panel, Xinran Ma, Chen Du, Lynne Hugendubler, Oksana Gavrilova, Alice Liu, Tracey McLaughlin, Klaus H. Kaestner, Elisabetta Mueller
Mol Cell Biol. 2013 Sep; 33(17): 3392–3399. doi: 10.1128/MCB.00244-13
PMCID:
PMC3753856
AbstractArticlePDF–2.1M
15.
Toward an understanding of the protein interaction network of the human liver
Jian Wang, Keke Huo, Lixin Ma, Liujun Tang, Dong Li, Xiaobi Huang, Yanzhi Yuan, Chunhua Li, Wei Wang, Wei Guan, Hui Chen, Chaozhi Jin, Junchen Wei, Wanqiao Zhang, Yongsheng Yang, Qiongming Liu, Ying Zhou, Cuili Zhang, Zhihao Wu, Wangxiang Xu, Ying Zhang, Tao Liu, Donghui Yu, Yaping Zhang, Liang Chen, Dewu Zhu, Xing Zhong, Lixin Kang, Xiang Gan, Xiaolan Yu, Qi Ma, Jing Yan, Li Zhou, Zhongyang Liu, Yunping Zhu, Tao Zhou, Fuchu He, Xiaoming Yang
Mol Syst Biol. 2011; 7: 536. Published online 2011 Oct 11. doi: 10.1038/msb.2011.67
Correction in:
Mol Syst Biol. 2017 Dec; 13(12): 965.
PMCID:
PMC3261708
AbstractArticlePDF–2.0M
16.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
17.
Differential binding and co-binding pattern of FOXA1 and FOXA3 and their relation to H3K4me3 in HepG2 cells revealed by ChIP-seq
Mehdi Motallebipour, Adam Ameur, Madhu Sudhan Reddy Bysani, Kalicharan Patra, Ola Wallerman, Jonathan Mangion, Melissa A Barker, Kevin J McKernan, Jan Komorowski, Claes Wadelius
Genome Biol. 2009; 10(11): R129. Published online 2009 Nov 17. doi: 10.1186/gb-2009-10-11-r129
PMCID:
PMC3091322
AbstractArticlePDF–2.3M
18.
An atlas of combinatorial transcriptional regulation in mouse and man
The FANTOM consortium and RIKEN Omics Science Center
Cell. Author manuscript; available in PMC 2011 Mar 5.
Published in final edited form as: Cell. 2010 Mar 5; 140(5): 744–752. doi: 10.1016/j.cell.2010.01.044
Correction in:
volume 141 on page 369
PMCID:
PMC2836267
AbstractArticlePDF–2.2M
19.
Genetic Predictors of Interindividual Variability in Hepatic CYP3A4 Expression
Vishal Lamba, John C. Panetta, Stephen Strom, Erin G. Schuetz
J Pharmacol Exp Ther. 2010 Mar; 332(3): 1088–1099. doi: 10.1124/jpet.109.160804
PMCID:
PMC2835441
AbstractArticlePDF–891K
20.
Foxp2 Inhibits Nkx2.1-Mediated Transcription of SP-C via Interactions with the Nkx2.1 Homeodomain
Beiyun Zhou, Qian Zhong, Parviz Minoo, Changgong Li, David K. Ann, Baruch Frenkel, Edward E. Morrisey, Edward D. Crandall, Zea Borok
Am J Respir Cell Mol Biol. 2008 Jun; 38(6): 750–758. Published online 2008 Jan 31. doi: 10.1165/rcmb.2007-0350OC
PMCID:
PMC2396252
AbstractArticlePDF–585K

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