PMC Links for GEO Profiles (Select 108381595) - PMC

Select item 100339371.

Assessment of community efforts to advance network-based prediction of protein–protein interactions

Xu-Wen Wang, Lorenzo Madeddu, Kerstin Spirohn, Leonardo Martini, Adriano Fazzone, Luca Becchetti, Thomas P. Wytock, István A. Kovács, Olivér M. Balogh, Bettina Benczik, Mátyás Pétervári, Bence Ágg, Péter Ferdinandy, Loan Vulliard, Jörg Menche, Stefania Colonnese, Manuela Petti, Gaetano Scarano, Francesca Cuomo, Tong Hao, Florent Laval, Luc Willems, Jean-Claude Twizere, Marc Vidal, Michael A. Calderwood, Enrico Petrillo, Albert-László Barabási, Edwin K. Silverman, Joseph Loscalzo, Paola Velardi, Yang-Yu Liu

Nat Commun. 2023; 14: 1582. Published online 2023 Mar 22. doi: 10.1038/s41467-023-37079-7

PMCID:: PMC10033937

Abstract Article PDF–1.5M

Select item 79535012.

SMIM1, carrier of the Vel blood group, is a tail-anchored transmembrane protein and readily forms homodimers in a cell-free system

Anja Nylander, Pawel Leznicki, Karina Vidovic, Stephen High, Martin L. Olsson

Biosci Rep. 2020 May 29; 40(5): BSR20200318. Published online 2020 May 7. doi: 10.1042/BSR20200318

PMCID:: PMC7953501

Abstract Article PDF–1.5M

Select item 71699833.

A reference map of the human binary protein interactome

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nature. Author manuscript; available in PMC 2020 Oct 8.

Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x

PMCID:: PMC7169983

Abstract Article PDF–5.4M

Select item 70790454.

Identification of a novel single‐nucleotide mutation in SMIM1 gene that results in low Vel antigen expression

Marea V.E. van der Rijst, Lesley Voorn, Barbera Veldhuisen, John M. Jongerius, Emile van den Akker, C. Ellen van der Schoot

Transfusion. 2019 Oct; 59(10): E8–E10. Published online 2019 Jun 19. doi: 10.1111/trf.15411

PMCID:: PMC7079045

Article PDF–496K

Select item 63435995.

SMIM1 polymorphisms in a donor population from southeast Brazil and their correlation with VEL expression

Carine Prisco Arnoni, Tatiane A. de Paula Vendrame, Janaína Guilhem Muniz, Diana Gazito, Rosangela Duarte de Medeiros Person, Afonso J. Pereira Cortez, Flavia R. M. Latini, Lilian Castilho

Blood Transfus. 2019 Jan; 17(1): 60–65. Prepublished online 2018 Jan 11. doi: 10.2450/2018.0192-17

PMCID:: PMC6343599

Abstract Article PDF–1.5M

Select item 52339896.

SMIM1 variants rs1175550 and rs143702418 independently modulate Vel blood group antigen expression

Mikael K. Christophersen, Magnus Jöud, Ram Ajore, Sunitha Vege, Klara W. Ljungdahl, Connie M. Westhoff, Martin L. Olsson, Jill R. Storry, Björn Nilsson

Sci Rep. 2017; 7: 40451. Published online 2017 Jan 13. doi: 10.1038/srep40451

PMCID:: PMC5233989

Abstract Article PDF–2.8M

Select item 46645797.

SMIM1 is a type II transmembrane phosphoprotein and displays the Vel blood group antigen at its carboxyl-terminus

Lionel Arnaud, Liam P. Kelley, Virginie Helias, Jean-Pierre Cartron, Bryan A. Ballif

FEBS Lett. Author manuscript; available in PMC 2016 Nov 30.

Published in final edited form as: FEBS Lett. 2015 Nov 30; 589(23): 3624–3630. Published online 2015 Oct 9. doi: 10.1016/j.febslet.2015.09.029

PMCID:: PMC4664579

Abstract Article PDF–1.7M

Select item 41792828.

SMIM1 underlies the Vel blood group and influences red blood cell traits

Ana Cvejic, Lonneke Haer-Wigman, Jonathan C Stephens, Myrto Kostadima, Peter A Smethurst, Mattia Frontini, Emile van den Akker, Paul Bertone, Ewa Bielczyk-Maczyńska, Samantha Farrow, Rudolf SN Fehrmann, Alan Gray, Masja de Haas, Vincent G Haver, Gregory Jordan, Juha Karjalainen, Hindrik HD Kerstens, Graham Kiddle, Heather Lloyd-Jones, Malcolm Needs, Joyce Poole, Aicha Ait Soussan, Augusto Rendon, Klaus Rieneck, Jennifer G Sambrook, Hein Schepers, Herman H W Silljé, Botond Sipos, Dorine Swinkels, Asif U Tamuri, Niek Verweij, Nicholas A Watkins, Harm-Jan Westra, Derek Stemple, Lude Franke, Nicole Soranzo, Hendrik G Stunnenberg, Nick Goldman, Pim van der Harst, C Ellen van der Schoot, Willem H Ouwehand, Cornelis A Albers

Nat Genet. Author manuscript; available in PMC 2014 Sep 29.

Published in final edited form as: Nat Genet. 2013 May; 45(5): 542–545. Published online 2013 Apr 7. doi: 10.1038/ng.2603

PMCID:: PMC4179282

Article PDF–754K

Select item 37661789.

Genome-wide association study identifies loci affecting blood copper, selenium and zinc

David M. Evans, Gu Zhu, Veronica Dy, Andrew C. Heath, Pamela A. F. Madden, John P. Kemp, George McMahon, Beate St Pourcain, Nicholas J. Timpson, Jean Golding, Debbie A. Lawlor, Colin Steer, Grant W. Montgomery, Nicholas G. Martin, George Davey Smith, John B. Whitfield

Hum Mol Genet. 2013 Oct 1; 22(19): 3998–4006. Published online 2013 May 29. doi: 10.1093/hmg/ddt239

PMCID:: PMC3766178

Abstract Article PDF–714K

Select item 366231710.

Disruption of SMIM1 causes the Vel− blood type

Bryan A Ballif, Virginie Helias, Thierry Peyrard, Cécile Menanteau, Carole Saison, Nicole Lucien, Sébastien Bourgouin, Maude Le Gall, Jean-Pierre Cartron, Lionel Arnaud

EMBO Mol Med. 2013 May; 5(5): 751–761. Published online 2013 Apr 15. doi: 10.1002/emmm.201302466

PMCID:: PMC3662317

Abstract Article PDF–916K

Select item 317805911.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 13924112.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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