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Items: 1 to 20 of 33

1.
K48- and K63-linked ubiquitin chain interactome reveals branch- and length-specific ubiquitin interactors
Anita Waltho, Oliver Popp, Christopher Lenz, Lukas Pluska, Mahil Lambert, Volker Dötsch, Philipp Mertins, Thomas Sommer
Life Sci Alliance. 2024 Aug; 7(8): e202402740. Published online 2024 May 21. doi: 10.26508/lsa.202402740
PMCID:
PMC11109483
AbstractArticlePDF–2.9M
2.
African Swine Fever Virus Cysteine Protease pS273R Inhibits Type I Interferon Signaling by Mediating STAT2 Degradation
Yu-Hui Li, Jiang-Ling Peng, Zhi-Sheng Xu, Mei-Guang Xiong, Huang-Ning Wu, Su-Yun Wang, Dan Li, Guo-Qiang Zhu, Yong Ran, Yan-Yi Wang
J Virol. 2023 Mar; 97(3): e01942-22. Published online 2023 Mar 1. doi: 10.1128/jvi.01942-22
PMCID:
PMC10062137
AbstractArticlePDF–2.5M
3.
A comprehensive SARS-CoV-2–human protein–protein interactome reveals COVID-19 pathobiology and potential host therapeutic targets
Yadi Zhou, Yuan Liu, Shagun Gupta, Mauricio I. Paramo, Yuan Hou, Chengsheng Mao, Yuan Luo, Julius Judd, Shayne Wierbowski, Marta Bertolotti, Mriganka Nerkar, Lara Jehi, Nir Drayman, Vlad Nicolaescu, Haley Gula, Savaş Tay, Glenn Randall, Peihui Wang, John T. Lis, Cédric Feschotte, Serpil C. Erzurum, Feixiong Cheng, Haiyuan Yu
Nat Biotechnol. Author manuscript; available in PMC 2023 Jan 20.
Published in final edited form as: Nat Biotechnol. 2023 Jan; 41(1): 128–139. Published online 2022 Oct 10. doi: 10.1038/s41587-022-01474-0
PMCID:
PMC9851973
AbstractArticlePDF–4.0M
4.
High Expression of PDLIM2 Predicts a Poor Prognosis in Prostate Cancer and Is Correlated with Epithelial-Mesenchymal Transition and Immune Cell Infiltration
Songzhe Piao, Lan Zheng, Haihong Zheng, Mengya Zhou, Qin Feng, Suna Zhou, Mang Ke, Haihua Yang, Xuequan Wang
J Immunol Res. 2022; 2022: 2922832. Published online 2022 Jun 6. doi: 10.1155/2022/2922832
PMCID:
PMC9192325
AbstractArticlePDF–7.2M
5.
WWP1 upregulation predicts poor prognosis and promotes tumor progression by regulating ubiquitination of NDFIP1 in intrahepatic cholangiocarcinoma
Yongjian Li, Qian Cheng, Jie Gao, Zhuomiaoyu Chen, Jingheng Guo, Zuyin Li, Lingyu Tian, Chao Zhang, Yuzi Li, Jiaxi Zheng, Zhao Li, Jiye Zhu
Cell Death Discov. 2022; 8: 107. Published online 2022 Mar 9. doi: 10.1038/s41420-022-00882-0
PMCID:
PMC8906119
AbstractArticlePDF–6.1M
6.
Systematic evaluation of the prognostic and immunological role of PDLIM2 across 33 cancer types
Yudan Zeng, Dongtao Lin, Mengqian Gao, Guoxia Du, Yongming Cai
Sci Rep. 2022; 12: 1933. Published online 2022 Feb 4. doi: 10.1038/s41598-022-05987-1
PMCID:
PMC8817018
AbstractArticlePDF–3.4M
7.
Kruppel like factor 10 up-regulates PDZ and LIM domain containing protein 2 via nuclear factor kappa-B pathway to inhibit proliferation and inflammatory of fibroblastoid synovial cell in rheumatoid arthritis
Shan Wang, Xuwen Zha, Shengting Ruan, Shoulin Yao, Xiaoyu Zhang
Bioengineered. 2022; 13(1): 1779–1790. Published online 2022 Jan 11. doi: 10.1080/21655979.2021.1995992
PMCID:
PMC8805881
AbstractArticlePDF–2.5M
8.
Central Nervous System-Infecting Pathogens Escherichia coli and Cryptococcus neoformans Exploit the Host Pdlim2 for Intracellular Traversal and Exocytosis in the Blood-Brain Barrier
Zhongming Li, Vincent M. Bruno, Kwang Sik Kim
Infect Immun. 2021 Oct; 89(10): e00128-21. Prepublished online 2021 Jul 6. Published online 2021 Sep 16. doi: 10.1128/IAI.00128-21
PMCID:
PMC8445199
AbstractArticlePDF–2.4M
9.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
10.
Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity
Jae Jin Kim, Seo Yun Lee, Fade Gong, Anna M. Battenhouse, Daniel R. Boutz, Aarti Bashyal, Samantha T. Refvik, Cheng-Ming Chiang, Blerta Xhemalce, Tanya T. Paull, Jennifer S. Brodbelt, Edward M. Marcotte, Kyle M. Miller
Genes Dev. 2019 Dec 1; 33(23-24): 1751–1774. doi: 10.1101/gad.331231.119
PMCID:
PMC6942044
AbstractArticlePDF–10M
11.
Causative role of PDLIM2 epigenetic repression in lung cancer and therapeutic resistance
Fan Sun, Liwen Li, Pengrong Yan, Jingjiao Zhou, Steven D. Shapiro, Gutian Xiao, Zhaoxia Qu
Nat Commun. 2019; 10: 5324. Published online 2019 Nov 22. doi: 10.1038/s41467-019-13331-x
PMCID:
PMC6876573
AbstractArticlePDF–2.4M
12.
The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei
Giovanni Nassa, Giorgio Giurato, Annamaria Salvati, Valerio Gigantino, Giovanni Pecoraro, Jessica Lamberti, Francesca Rizzo, Tuula A. Nyman, Roberta Tarallo, Alessandro Weisz
Sci Data. 2019; 6: 173. Published online 2019 Sep 16. doi: 10.1038/s41597-019-0179-2
PMCID:
PMC6746822
AbstractArticlePDF–2.0M
13.
Systematic profiling identifies PDLIM2 as a novel prognostic predictor for oesophageal squamous cell carcinoma (ESCC)
Guiqin Song, Jun Xu, Lang He, Xiao Sun, Rong Xiong, Yuxi Luo, Xin Hu, Ruolan Zhang, Qiuju Yue, Kang Liu, Gang Feng
J Cell Mol Med. 2019 Aug; 23(8): 5751–5761. Published online 2019 Jun 20. doi: 10.1111/jcmm.14491
PMCID:
PMC6653303
AbstractArticlePDF–1.8M
14.
Pull-down Assay on Streptavidin Beads and Surface Plasmon Resonance Chips for SWATH-MS-based Interactomics
JOSEF MARYÁŠ, JAKUB FAKTOR, LENKA ČÁPKOVÁ, PETR MÜLLER, PETR SKLÁDAL, PAVEL BOUCHAL
Cancer Genomics Proteomics. 2018 Sep-Oct; 15(5): 395–4047. Published online 2018 Sep 3. doi: 10.21873/cgp.20098
PMCID:
PMC6199577
AbstractArticlePDF–297K
15.
Quantitative mapping of RNA-mediated nuclear estrogen receptor β interactome in human breast cancer cells
Giorgio Giurato, Giovanni Nassa, Annamaria Salvati, Elena Alexandrova, Francesca Rizzo, Tuula A. Nyman, Alessandro Weisz, Roberta Tarallo
Sci Data. 2018; 5: 180031. Published online 2018 Mar 6. doi: 10.1038/sdata.2018.31
PMCID:
PMC5839158
AbstractArticlePDF–1.9M
16.
Global Proteome and Phospho-proteome Analysis of Merlin-deficient Meningioma and Schwannoma Identifies PDLIM2 as a Novel Therapeutic Target
Kayleigh Bassiri, Sara Ferluga, Vikram Sharma, Nelofer Syed, Claire L. Adams, Edwin Lasonder, C Oliver Hanemann
EBioMedicine. 2017 Feb; 16: 76–86. Published online 2017 Jan 18. doi: 10.1016/j.ebiom.2017.01.020
PMCID:
PMC5474504
AbstractArticlePDF–1.3M
17.
MKRN2 is a novel ubiquitin E3 ligase for the p65 subunit of NF-κB and negatively regulates inflammatory responses
Chanyoung Shin, Yuma Ito, Shota Ichikawa, Makio Tokunaga, Kumiko Sakata-Sogawa, Takashi Tanaka
Sci Rep. 2017; 7: 46097. Published online 2017 Apr 5. doi: 10.1038/srep46097
PMCID:
PMC5380948
AbstractArticlePDF–1.1M
18.
Inactivation of the putative ubiquitin-E3 ligase PDLIM2 in classical Hodgkin and anaplastic large cell lymphoma
K D Wurster, F Hummel, J Richter, M Giefing, S Hartmann, M-L Hansmann, S Kreher, K Köchert, D Krappmann, W Klapper, M Hummel, S-S Wenzel, G Lenz, M Janz, B Dörken, R Siebert, S Mathas
Leukemia. 2017 Mar; 31(3): 602–613. Prepublished online 2016 Aug 19. Published online 2016 Oct 14. doi: 10.1038/leu.2016.238
PMCID:
PMC5339435
AbstractArticlePDF–3.0M
19.
Long noncoding RNA OR3A4 promotes metastasis and tumorigenicity in gastric cancer
Xiaobo Guo, Ziguo Yang, Qiaoming Zhi, Dan Wang, Lei Guo, Guimei Li, Ruizhen Miao, Yulong Shi, Yuting Kuang
Oncotarget. 2016 May 24; 7(21): 30276–30294. Published online 2016 Feb 6. doi: 10.18632/oncotarget.7217
PMCID:
PMC5058680
AbstractArticlePDF–8.9M
20.
High-throughput analyses of hnRNP H1 dissects its multi-functional aspect
Philip J. Uren, Emad Bahrami-Samani, Patricia Rosa de Araujo, Christine Vogel, Mei Qiao, Suzanne C. Burns, Andrew D. Smith, Luiz O. F. Penalva
RNA Biol. 2016 Apr; 13(4): 400–411. Published online 2016 Jan 13. doi: 10.1080/15476286.2015.1138030
PMCID:
PMC4841607
AbstractArticlePDF–1.6M

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