PMC Links for GEO Profiles (Select 109641451) - PMC

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Items: 12

Select item 84410481.

Base excision repair causes age-dependent accumulation of single-stranded DNA breaks that contribute to Parkinson disease pathology

Tanima SenGupta, Konstantinos Palikaras, Ying Q. Esbensen, Georgios Konstantinidis, Francisco Jose Naranjo Galindo, Kavya Achanta, Henok Kassahun, Ioanna Stavgiannoudaki, Vilhelm A. Bohr, Mansour Akbari, Johannes Gaare, Charalampos Tzoulis, Nektarios Tavernarakis, Hilde Nilsen

Cell Rep. 2021 Sep 7; 36(10): 109668. Published online 2021 Sep 7. doi: 10.1016/j.celrep.2021.109668

PMCID:: PMC8441048

Abstract Article

Select item 79951762.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 77447773.

The Base Excision Repair Pathway in the Nematode Caenorhabditis elegans

Noha Elsakrmy, Qiu-Mei Zhang-Akiyama, Dindial Ramotar

Front Cell Dev Biol. 2020; 8: 598860. Published online 2020 Dec 3. doi: 10.3389/fcell.2020.598860

PMCID:: PMC7744777

Abstract Article PDF–1.7M

Select item 62332234.

AP endonuclease EXO-3 deficiency causes developmental delay and abnormal vulval organogenesis, Pvl, through DNA glycosylase-initiated checkpoint activation in Caenorhabditis elegans

Masahiro Miyaji, Yuichiro Hayashi, Masafumi Funakoshi, Akihiro Tanaka, Qiu-Mei Zhang-Akiyama

Sci Rep. 2018; 8: 16736. Published online 2018 Nov 13. doi: 10.1038/s41598-018-35063-6

PMCID:: PMC6233223

Abstract Article PDF–2.4M

Select item 62165905.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 59315556.

UNG-1 and APN-1 are the major enzymes to efficiently repair 5-hydroxymethyluracil DNA lesions in C. elegans

Arturo Papaluca, J. Richard Wagner, H. Uri Saragovi, Dindial Ramotar

Sci Rep. 2018; 8: 6860. Published online 2018 May 1. doi: 10.1038/s41598-018-25124-1

PMCID:: PMC5931555

Abstract Article PDF–5.3M

Select item 57661647.

Systematic analysis of DNA crosslink repair pathways during development and aging in Caenorhabditis elegans

David M. Wilson, III, Matthias Rieckher, Ashley B. Williams, Björn Schumacher

Nucleic Acids Res. 2017 Sep 19; 45(16): 9467–9480. Published online 2017 Jul 29. doi: 10.1093/nar/gkx660

PMCID:: PMC5766164

Abstract Article PDF–6.5M

Select item 36648128.

Active transcriptomic and proteomic reprogramming in the C. elegans nucleotide excision repair mutant xpa-1

Katarzyna D. Arczewska, Gisele G. Tomazella, Jessica M. Lindvall, Henok Kassahun, Silvia Maglioni, Alessandro Torgovnick, Johan Henriksson, Olli Matilainen, Bryce J. Marquis, Bryant C. Nelson, Pawel Jaruga, Eshrat Babaie, Carina I. Holmberg, Thomas R. Bürglin, Natascia Ventura, Bernd Thiede, Hilde Nilsen

Nucleic Acids Res. 2013 May; 41(10): 5368–5381. Published online 2013 Apr 10. doi: 10.1093/nar/gkt225