PMC Links for GEO Profiles (Select 109707297) - PMC

Select item 81650301.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 55316112.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 54952253.

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing

Teng Fei, Yiwen Chen, Tengfei Xiao, Wei Li, Laura Cato, Peng Zhang, Maura B. Cotter, Michaela Bowden, Rosina T. Lis, Shuang G. Zhao, Qiu Wu, Felix Y. Feng, Massimo Loda, Housheng Hansen He, X. Shirley Liu, Myles Brown

Proc Natl Acad Sci U S A. 2017 Jun 27; 114(26): E5207–E5215. Published online 2017 Jun 13. doi: 10.1073/pnas.1617467114

PMCID:: PMC5495225

Abstract Article PDF–1.3M

Select item 45728674.

CD95 promotes metastatic spread via Sck in pancreatic ductal adenocarcinoma

M Teodorczyk, S Kleber, D Wollny, J P Sefrin, B Aykut, A Mateos, P Herhaus, I Sancho-Martinez, O Hill, C Gieffers, J Sykora, W Weichert, C Eisen, A Trumpp, M R Sprick, F Bergmann, T Welsch, A Martin-Villalba

Cell Death Differ. 2015 Jul; 22(7): 1192–1202. Published online 2015 Jan 23. doi: 10.1038/cdd.2014.217

PMCID:: PMC4572867

Abstract Article PDF–2.3M

Select item 40831105.

Enhanced Prediction of Src Homology 2 (SH2) Domain Binding Potentials Using a Fluorescence Polarization-derived c-Met, c-Kit, ErbB, and Androgen Receptor Interactome

Kin K. Leung, Ronald J. Hause, Jr., John L. Barkinge, Mark F. Ciaccio, Chih-Pin Chuu, Richard B. Jones

Mol Cell Proteomics. 2014 Jul; 13(7): 1705–1723. Published online 2014 Apr 12. doi: 10.1074/mcp.M113.034876

PMCID:: PMC4083110

Abstract Article PDF–6.6M

Select item 40393106.

Perturbation of the mutated EGFR interactome identifies vulnerabilities and resistance mechanisms

Jiannong Li, Keiryn Bennett, Alexey Stukalov, Bin Fang, Guolin Zhang, Takeshi Yoshida, Isamu Okamoto, Jae-Young Kim, Lanxi Song, Yun Bai, Xiaoning Qian, Bhupendra Rawal, Michael Schell, Florian Grebien, Georg Winter, Uwe Rix, Steven Eschrich, Jacques Colinge, John Koomen, Giulio Superti-Furga, Eric B Haura

Mol Syst Biol. 2013; 9: 705. Published online 2013 Nov 5. doi: 10.1038/msb.2013.61

PMCID:: PMC4039310

Abstract Article PDF–3.2M

Select item 39528457.

The ShcD signaling adaptor facilitates ligand-independent phosphorylation of the EGF receptor

Melanie K. B. Wills, Jiefei Tong, Sylvie L. Tremblay, Michael F. Moran, Nina Jones

Mol Biol Cell. 2014 Mar 15; 25(6): 739–752. doi: 10.1091/mbc.E13-08-0434

PMCID:: PMC3952845

Abstract Article PDF–3.9M

Select item 39461928.

SHC2 gene copy number in multiple system atrophy (MSA)

Marcus C. Ferguson, Emily M. Garland, Lora Hedges, Bethany Womack-Nunley, Rizwan Hamid, John A. Phillips, III, Cyndya A. Shibao, Satish R. Raj, Italo Biaggioni, David Robertson

Clin Auton Res. Author manuscript; available in PMC 2015 Feb 1.

Published in final edited form as: Clin Auton Res. 2014 Feb; 24(1): 25–30. Published online 2013 Oct 30. doi: 10.1007/s10286-013-0216-8

PMCID:: PMC3946192

Abstract Article PDF–81K

Select item 34334209.

Comprehensive Binary Interaction Mapping of SH2 Domains via Fluorescence Polarization Reveals Novel Functional Diversification of ErbB Receptors

Ronald J. Hause, Jr., Kin K. Leung, John L. Barkinge, Mark F. Ciaccio, Chih-pin Chuu, Richard B. Jones

PLoS One. 2012; 7(9): e44471. Published online 2012 Sep 4. doi: 10.1371/journal.pone.0044471

PMCID:: PMC3433420

Abstract Article PDF–1.1M

Select item 317805910.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 314165711.

Copy number loss of (src homology 2 domain containing)-transforming protein 2 (SHC2) gene: discordant loss in monozygotic twins and frequent loss in patients with multiple system atrophy

Hidenao Sasaki, Mitsuru Emi, Hiroshi Iijima, Noriko Ito, Hidenori Sato, Ichiro Yabe, Takeo Kato, Jun Utsumi, Kenichi Matsubara

Mol Brain. 2011; 4: 24. Published online 2011 Jun 10. doi: 10.1186/1756-6606-4-24

PMCID:: PMC3141657

Abstract Article PDF–1.3M

Select item 141529712.

HIV-1 Tat Regulates Endothelial Cell Cycle Progression via Activation of the Ras/ERK MAPK Signaling Pathway

Elena Toschi, Ilaria Bacigalupo, Raffaele Strippoli, Chiara Chiozzini, Anna Cereseto, Mario Falchi, Filomena Nappi, Cecilia Sgadari, Giovanni Barillari, Fabrizio Mainiero, Barbara Ensoli

Mol Biol Cell. 2006 Apr; 17(4): 1985–1994. doi: 10.1091/mbc.E05-08-0717