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Select item 107963751.

Death Induced by Survival gene Elimination (DISE) correlates with neurotoxicity in Alzheimer’s disease and aging

Bidur Paudel, Si-Yeon Jeong, Carolina Pena Martinez, Alexis Rickman, Ashley Haluck-Kangas, Elizabeth T. Bartom, Kristina Fredriksen, Amira Affaneh, John A. Kessler, Joseph R. Mazzulli, Andrea E. Murmann, Emily Rogalski, Changiz Geula, Adriana Ferreira, Bradlee L. Heckmann, Douglas R. Green, Katherine R. Sadleir, Robert Vassar, Marcus E. Peter

Nat Commun. 2024; 15: 264. Published online 2024 Jan 18. doi: 10.1038/s41467-023-44465-8

PMCID:: PMC10796375

Abstract Article PDF–3.7M

Select item 103061922.

Autophagy prevents early proinflammatory responses and neutrophil recruitment during Mycobacterium tuberculosis infection without affecting pathogen burden in macrophages

Rachel L. Kinsella, Jacqueline M. Kimmey, Asya Smirnov, Reilly Woodson, Margaret R. Gaggioli, Sthefany M. Chavez, Darren Kreamalmeyer, Christina L. Stallings

PLoS Biol. 2023 Jun; 21(6): e3002159. Published online 2023 Jun 15. doi: 10.1371/journal.pbio.3002159

PMCID:: PMC10306192

Abstract Article PDF–1.8M

Select item 96290723.

Loss of RUBCN/rubicon in adipocytes mediates the upregulation of autophagy to promote the fasting response

Tadashi Yamamuro, Shuhei Nakamura, Kyosuke Yanagawa, Ayaka Tokumura, Tsuyoshi Kawabata, Atsunori Fukuhara, Hirofumi Teranishi, Maho Hamasaki, Iichiro Shimomura, Tamotsu Yoshimori

Autophagy. 2022; 18(11): 2686–2696. Published online 2022 Mar 14. doi: 10.1080/15548627.2022.2047341

PMCID:: PMC9629072

Abstract Article PDF–2.6M

Select item 95926094.

Microglial debris is cleared by astrocytes via C4b-facilitated phagocytosis and degraded via RUBICON-dependent noncanonical autophagy in mice

Tian Zhou, Yuxin Li, Xiaoyu Li, Fanzhuo Zeng, Yanxia Rao, Yang He, Yafei Wang, Meizhen Liu, Dali Li, Zhen Xu, Xin Zhou, Siling Du, Fugui Niu, Jiyun Peng, Xifan Mei, Sheng-Jian Ji, Yousheng Shu, Wei Lu, Feifan Guo, Tianzhun Wu, Ti-Fei Yuan, Ying Mao, Bo Peng

Nat Commun. 2022; 13: 6233. Published online 2022 Oct 24. doi: 10.1038/s41467-022-33932-3

PMCID:: PMC9592609

Abstract Article PDF–11M

Select item 92456295.

Mitochondrial calcium uniporter promotes phagocytosis-dependent activation of the NLRP3 inflammasome

Hong Dong, Bao Zhao, Jianwen Chen, Zihao Liu, Xinghui Li, Lupeng Li, Haitao Wen

Proc Natl Acad Sci U S A. 2022 Jun 28; 119(26): e2123247119. Published online 2022 Jun 22. doi: 10.1073/pnas.2123247119

PMCID:: PMC9245629

Abstract Article PDF–2.6M

Select item 92211526.

Neuronal Rubicon Represses Extracellular APP/Amyloid β Deposition in Alzheimer’s Disease

Sandra Espinoza, Felipe Grunenwald, Wileidy Gomez, Felipe García, Lorena Abarzúa-Catalan, Sebastián Oyarce-Pezoa, Maria Fernanda Hernandez, Bastián I. Cortés, Markus Uhrig, Daniela P. Ponce, Claudia Durán-Aniotz, Claudio Hetz, Carol D. SanMartín, Victor H. Cornejo, Fernando Ezquer, Valentina Parra, Maria Isabel Behrens, Patricio A. Manque, Diego Rojas-Rivera, René L. Vidal, Ute Woehlbier, Melissa Nassif

Cells. 2022 Jun; 11(12): 1860. Published online 2022 Jun 7. doi: 10.3390/cells11121860

PMCID:: PMC9221152

Abstract Article PDF–6.9M

Select item 90576307.

Rubicon promotes rather than restricts murine lupus and is not required for LC3-associated phagocytosis

Rachael A. Gordon, Christina Giannouli, Chirag Raparia, Sheldon I. Bastacky, Anthony Marinov, William Hawse, Richard Cattley, Jeremy S. Tilstra, Allison M. Campbell, Kevin M. Nickerson, Anne Davidson, Mark J. Shlomchik

JCI Insight. 2022 Apr 8; 7(7): e155537. Published online 2022 Apr 8. doi: 10.1172/jci.insight.155537

PMCID:: PMC9057630

Abstract Article PDF–3.6M

Select item 89211928.

Rubicon-deficiency sensitizes mice to mixed lineage kinase domain-like (MLKL)-mediated kidney ischemia-reperfusion injury

Wulf Tonnus, Sophie Locke, Claudia Meyer, Francesca Maremonti, Lena Eggert, Anne von Mässenhausen, Stefan R. Bornstein, Douglas R. Green, Andreas Linkermann

Cell Death Dis. 2022 Mar; 13(3): 236. Published online 2022 Mar 14. doi: 10.1038/s41419-022-04682-3

PMCID:: PMC8921192

Abstract Article PDF–3.2M

Select item 87419689.

Rubicon-regulated beta-1 adrenergic receptor recycling protects the heart from pressure overload

Yasuhiro Akazawa, Manabu Taneike, Hiromichi Ueda, Rika Kitazume-Taneike, Tomokazu Murakawa, Ryuta Sugihara, Hiroki Yorifuji, Hiroki Nishida, Kentaro Mine, Ayana Hioki, Shigemiki Omiya, Hiroyuki Nakayama, Osamu Yamaguchi, Tamotsu Yoshimori, Yasushi Sakata, Kinya Otsu

Sci Rep. 2022; 12: 41. Published online 2022 Jan 7. doi: 10.1038/s41598-021-03920-6

PMCID:: PMC8741968

Abstract Article PDF–1.9M

Select item 838660510.

Metabolic effects of RUBCN/Rubicon deficiency in kidney proximal tubular epithelial cells

Jun Matsuda, Atsushi Takahashi, Yoshitsugu Takabatake, Shinsuke Sakai, Satoshi Minami, Takeshi Yamamoto, Ryuta Fujimura, Tomoko Namba-Hamano, Hiroaki Yonishi, Jun Nakamura, Tomonori Kimura, Jun-Ya Kaimori, Isao Matsui, Masatomo Takahashi, Motonao Nakao, Yoshihiro Izumi, Takeshi Bamba, Taiji Matsusaka, Fumio Niimura, Motoko Yanagita, Tamotsu Yoshimori, Yoshitaka Isaka

Autophagy. 2020; 16(10): 1889–1904. Published online 2020 Jan 16. doi: 10.1080/15548627.2020.1712107

PMCID:: PMC8386605

Abstract Article PDF–6.2M

Select item 834160411.

Rubicon prevents autophagic degradation of GATA4 to promote Sertoli cell function

Tadashi Yamamuro, Shuhei Nakamura, Yu Yamano, Tsutomu Endo, Kyosuke Yanagawa, Ayaka Tokumura, Takafumi Matsumura, Kiyonori Kobayashi, Hideto Mori, Yusuke Enokidani, Gota Yoshida, Hitomi Imoto, Tsuyoshi Kawabata, Maho Hamasaki, Akiko Kuma, Sohei Kuribayashi, Kentaro Takezawa, Yuki Okada, Manabu Ozawa, Shinichiro Fukuhara, Takashi Shinohara, Masahito Ikawa, Tamotsu Yoshimori

PLoS Genet. 2021 Aug; 17(8): e1009688. Published online 2021 Aug 5. doi: 10.1371/journal.pgen.1009688

PMCID:: PMC8341604

Abstract Article PDF–2.8M

Select item 793877012.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 788185513.

Podocyte EGFR Inhibits Autophagy Through Upregulation of Rubicon in Type 2 Diabetic Nephropathy

Yan Li, Yu Pan, Shirong Cao, Kensuke Sasaki, Yinqiu Wang, Aolei Niu, Xiaofeng Fan, Suwan Wang, Ming-Zhi Zhang, Raymond C. Harris

Diabetes. 2021 Feb; 70(2): 562–576. Published online 2020 Nov 25. doi: 10.2337/db20-0660

PMCID:: PMC7881855

Abstract Article PDF–3.7M

Select item 743489114.

Age-dependent loss of adipose Rubicon promotes metabolic disorders via excess autophagy

Tadashi Yamamuro, Tsuyoshi Kawabata, Atsunori Fukuhara, Shotaro Saita, Shuhei Nakamura, Hikari Takeshita, Mari Fujiwara, Yusuke Enokidani, Gota Yoshida, Keisuke Tabata, Maho Hamasaki, Akiko Kuma, Koichi Yamamoto, Iichiro Shimomura, Tamotsu Yoshimori

Nat Commun. 2020; 11: 4150. Published online 2020 Aug 18. doi: 10.1038/s41467-020-17985-w

PMCID:: PMC7434891

Abstract Article PDF–2.8M

Select item 726004215.

Upregulation of Rubicon promotes autosis during myocardial ischemia/reperfusion injury

Jihoon Nah, Peiyong Zhai, Chun-Yang Huang, Álvaro F. Fernández, Satvik Mareedu, Beth Levine, Junichi Sadoshima

J Clin Invest. 2020 Jun 1; 130(6): 2978–2991. Published online 2020 May 4. doi: 10.1172/JCI132366

PMCID:: PMC7260042

Abstract Article PDF–11M

Select item 714783516.

Select autophagy genes maintain quiescence of tissue-resident macrophages and increase susceptibility to Listeria monocytogenes

Ya-Ting Wang, Konstantin Zaitsev, Qun Lu, Shan Li, W. Timothy Schaiff, Ki-Wook Kim, Lindsay Droit, Craig B. Wilen, Chandni Desai, Dale R. Balce, Robert C. Orchard, Anthony Orvedahl, Sunmin Park, Darren Kreamalmeyer, Scott A. Handley, John D. Pfeifer, Megan T. Baldridge, Maxim N. Artyomov, Christina L Stallings, Herbert W. Virgin

Nat Microbiol. Author manuscript; available in PMC 2020 Jul 20.

Published in final edited form as: Nat Microbiol. 2020 Feb; 5(2): 272–281. Published online 2020 Jan 20. doi: 10.1038/s41564-019-0633-0

Correction in:: Nat Microbiol. 2021 May 25

PMCID:: PMC7147835

Abstract Article PDF–4.7M

Select item 668919917.

LC3-associated endocytosis facilitates β-amyloid clearance and mitigates neurodegeneration in murine Alzheimer’s Disease

Bradlee L. Heckmann, Brett J.W. Teubner, Bart Tummers, Emilio Boada-Romero, Lacie Harris, Mao Yang, Clifford S. Guy, Stanislav S. Zakharenko, Douglas R. Green

Cell. Author manuscript; available in PMC 2020 Jul 25.

Published in final edited form as: Cell. 2019 Jul 25; 178(3): 536–551.e14. Published online 2019 Jun 27. doi: 10.1016/j.cell.2019.05.056

Correction in:: Cell. 2020 Dec 10; 183(6): 1733–1734.

PMCID:: PMC6689199

Abstract Article PDF–3.5M

Select item 661383818.

Ubiquitination of UVRAG by SMURF1 promotes autophagosome maturation and inhibits hepatocellular carcinoma growth

Xing Feng, Yanyan Jia, Yuyu Zhang, Fei Ma, Yuekun Zhu, Xuehui Hong, Qingxin Zhou, Ruixing He, Heng Zhang, Junfei Jin, Daxun Piao, He Huang, Qinghua Li, Xingfeng Qiu, Zhiyong Zhang

Autophagy. 2019; 15(7): 1130–1149. Published online 2019 Jan 27. doi: 10.1080/15548627.2019.1570063

PMCID:: PMC6613838

Abstract Article PDF–10M

Select item 638114619.

Suppression of autophagic activity by Rubicon is a signature of aging

Shuhei Nakamura, Masaki Oba, Mari Suzuki, Atsushi Takahashi, Tadashi Yamamuro, Mari Fujiwara, Kensuke Ikenaka, Satoshi Minami, Namine Tabata, Kenichi Yamamoto, Sayaka Kubo, Ayaka Tokumura, Kanako Akamatsu, Yumi Miyazaki, Tsuyoshi Kawabata, Maho Hamasaki, Koji Fukui, Kazunori Sango, Yoshihisa Watanabe, Yoshitsugu Takabatake, Tomoya S. Kitajima, Yukinori Okada, Hideki Mochizuki, Yoshitaka Isaka, Adam Antebi, Tamotsu Yoshimori

Nat Commun. 2019; 10: 847. Published online 2019 Feb 19. doi: 10.1038/s41467-019-08729-6

PMCID:: PMC6381146

Abstract Article PDF–2.8M

Select item 620124520.

LC3-associated phagocytosis in myeloid cells promotes tumor immune tolerance

Larissa Dias Cunha, Mao Yang, Robert Carter, Clifford Guy, Lacie Harris, Jeremy Chase Crawford, Giovanni Quarato, Emilio Boada-Romero, Halime Kalkavan, Michael David Leslie Johnson, Sivaraman Natarajan, Meghan Elizabeth Turnis, David Finkelstein, Joseph Thomas Opferman, Charles Gawad, Douglas Ross Green

Cell. Author manuscript; available in PMC 2019 Oct 4.

Published in final edited form as: Cell. 2018 Oct 4; 175(2): 429–441.e16. Published online 2018 Sep 20. doi: 10.1016/j.cell.2018.08.061

PMCID:: PMC6201245

Abstract Article PDF–1.1M

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