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Items: 1 to 20 of 24

1.
Mei5–Sae3 stabilizes Dmc1 nucleating clusters for efficient Dmc1 assembly on RPA-coated single-stranded DNA
Chin-Dian Wei, Hao-Yen Chang, Chia-Hua Lu, Chih-Chun Chang, Asako Furukohri, Stephen Mwaniki, Akira Shinohara, Peter Chi, Hung-Wen Li
Nucleic Acids Res. 2024 Oct 28; 52(19): 11768–11784. Published online 2024 Sep 14. doi: 10.1093/nar/gkae780
PMCID:
PMC11514449
AbstractArticlePDF–2.0M
2.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
3.
The S. cerevisiae m6A-reader Pho92 promotes timely meiotic recombination by controlling key methylated transcripts
Jérémy Scutenaire, Damien Plassard, Mélody Matelot, Tommaso Villa, Julie Zumsteg, Domenico Libri, Bertrand Séraphin
Nucleic Acids Res. 2023 Jan 25; 51(2): 517–535. Published online 2022 Aug 8. doi: 10.1093/nar/gkac640
PMCID:
PMC9881176
AbstractArticlePDF–7.3M
4.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
5.
Yeast Ssd1 is a non-enzymatic member of the RNase II family with an alternative RNA recognition site
Rosemary A Bayne, Uma Jayachandran, Aleksandra Kasprowicz, Stefan Bresson, David Tollervey, Edward W J Wallace, Atlanta G Cook
Nucleic Acids Res. 2022 Mar 21; 50(5): 2923–2937. Published online 2021 Jul 24. doi: 10.1093/nar/gkab615
PMCID:
PMC8934651
AbstractArticlePDF–4.4M
6.
The SR-protein Npl3 is an essential component of the meiotic splicing regulatory network in Saccharomyces cerevisiae
Rima Sandhu, Aniketa Sinha, Ben Montpetit
Nucleic Acids Res. 2021 Mar 18; 49(5): 2552–2568. Published online 2021 Feb 12. doi: 10.1093/nar/gkab071
PMCID:
PMC7969001
AbstractArticlePDF–5.8M
7.
A mutant form of Dmc1 that bypasses the requirement for accessory protein Mei5-Sae3 reveals independent activities of Mei5-Sae3 and Rad51 in Dmc1 filament stability
Diedre Reitz, Jennifer Grubb, Douglas K. Bishop
PLoS Genet. 2019 Dec; 15(12): e1008217. Published online 2019 Dec 2. doi: 10.1371/journal.pgen.1008217
PMCID:
PMC6907854
AbstractArticlePDF–2.6M
8.
RPA resolves conflicting activities of accessory proteins during reconstitution of Dmc1-mediated meiotic recombination
Yuen-Ling Chan, Annie Zhang, Benjamin P Weissman, Douglas K Bishop
Nucleic Acids Res. 2019 Jan 25; 47(2): 747–761. Published online 2018 Nov 20. doi: 10.1093/nar/gky1160
PMCID:
PMC6344864
AbstractArticlePDF–3.5M
9.
Systematic Analysis of Complex Genetic Interactions
Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers
Science. Author manuscript; available in PMC 2018 Nov 4.
Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729
PMCID:
PMC6215713
AbstractArticlePDF–1.9M
10.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
11.
The Genetic Landscape of a Cell
Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Sep 15.
Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823
PMCID:
PMC5600254
AbstractArticlePDF–2.4M
12.
Functional Metabolomics Describes the Yeast Biosynthetic Regulome
Michael Mülleder, Enrica Calvani, Mohammad Tauqeer Alam, Richard Kangda Wang, Florian Eckerstorfer, Aleksej Zelezniak, Markus Ralser
Cell. 2016 Oct 6; 167(2): 553–565.e12. doi: 10.1016/j.cell.2016.09.007
PMCID:
PMC5055083
AbstractArticlePDF–3.9M
13.
Hop2 and Sae3 Are Required for Dmc1-Mediated Double-Strand Break Repair via Homolog Bias during Meiosis
Hong-Rae Cho, Yoon-Ju Kong, Soo-Gil Hong, Keun Pil Kim
Mol Cells. 2016 Jul; 39(7): 550–556. Published online 2016 Jun 21. doi: 10.14348/molcells.2016.0069
PMCID:
PMC4959020
AbstractArticlePDF–4.1M
14.
Dmc1 catalyzes interhomolog joint molecule formation in meiosis with Rad51 and Mei5-Sae3 as accessory factors
Veronica Cloud, Yuen-Ling Chan, Jennifer Grubb, Brian Budke, Douglas K. Bishop
Science. Author manuscript; available in PMC 2014 Jun 13.
Published in final edited form as: Science. 2012 Sep 7; 337(6099): 1222–1225. doi: 10.1126/science.1219379
PMCID:
PMC4056682
AbstractArticlePDF–1.2M
15.
Coiled-coil networking shapes cell molecular machinery
Yongqiang Wang, Xinlei Zhang, Hong Zhang, Yi Lu, Haolong Huang, Xiaoxi Dong, Jinan Chen, Jiuhong Dong, Xiao Yang, Haiying Hang, Taijiao Jiang
Mol Biol Cell. 2012 Oct 1; 23(19): 3911–3922. doi: 10.1091/mbc.E12-05-0396
PMCID:
PMC3459866
AbstractArticlePDF–7.0M
16.
An essential role for trimethylguanosine RNA caps in Saccharomyces cerevisiae meiosis and their requirement for splicing of SAE3 and PCH2 meiotic pre-mRNAs
Zhicheng R. Qiu, Stewart Shuman, Beate Schwer
Nucleic Acids Res. 2011 Jul; 39(13): 5633–5646. Published online 2011 Mar 11. doi: 10.1093/nar/gkr083
PMCID:
PMC3141232
AbstractArticlePDF–5.5M
17.
The budding yeast Mei5-Sae3 complex interacts with Rad51 and preferentially binds a DNA fork structure
Amanda F. Say, LeAnna L. Ledford, Deepti Sharma, Akhilesh K. Singh, Wing-Kit Leung, Hilarie A. Sehorn, Hideo Tsubouchi, Patrick Sung, Michael G. Sehorn
DNA Repair (Amst) Author manuscript; available in PMC 2012 Jun 10.
Published in final edited form as: DNA Repair (Amst). 2011 Jun 10; 10(6): 586–594. Published online 2011 May 4. doi: 10.1016/j.dnarep.2011.03.006
PMCID:
PMC3119066
AbstractArticlePDF–2.2M
18.
Integration of a splicing regulatory network within the meiotic gene expression program of Saccharomyces cerevisiae
Elizabeth M. Munding, A. Haller Igel, Lily Shiue, Kristel M. Dorighi, Lisa R. Treviño, Manuel Ares, Jr
Genes Dev. 2010 Dec 1; 24(23): 2693–2704. doi: 10.1101/gad.1977410
PMCID:
PMC2994042
AbstractArticlePDF–895K
19.
The Mei5-Sae3 Protein Complex Mediates Dmc1 Activity in Saccharomyces cerevisiae
Susan R. Ferrari, Jennifer Grubb, Douglas K. Bishop
J Biol Chem. 2009 May 1; 284(18): 11766–11770. doi: 10.1074/jbc.C900023200
PMCID:
PMC2673244
AbstractArticlePDF–287K
20.
Deletion of Many Yeast Introns Reveals a Minority of Genes that Require Splicing for Function
Julie Parenteau, Mathieu Durand, Steeve Véronneau, Andrée-Anne Lacombe, Geneviève Morin, Valérie Guérin, Bojana Cecez, Julien Gervais-Bird, Chu-Shin Koh, David Brunelle, Raymund J. Wellinger, Benoit Chabot, Sherif Abou Elela
Mol Biol Cell. 2008 May; 19(5): 1932–1941. doi: 10.1091/mbc.E07-12-1254
PMCID:
PMC2366882
AbstractArticlePDF–1.7M

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