PMC Links for GEO Profiles (Select 114037119) - PMC

Select item 89583641.

DNA methylation in the pathophysiology of hyperphenylalaninemia in the PAH^enu2 mouse model of phenylketonuria

S.F. Dobrowolski, J. Lyons-Weiler, K. Spridik, J. Vockley, K. Skvorak, A. Biery

Mol Genet Metab. Author manuscript; available in PMC 2022 Mar 28.

Published in final edited form as: Mol Genet Metab. 2016 Sep; 119(1-2): 1–7. Published online 2016 Jan 14. doi: 10.1016/j.ymgme.2016.01.001

PMCID:: PMC8958364

Abstract Article PDF–346K

Select item 88921442.

ADAR1- and ADAR2-mediated regulation of maturation and targeting of miR-376b to modulate GABA neurotransmitter catabolism

Albin Widmark, Eduardo A. Sagredo, Victor Karlström, Mikaela Behm, Inna Biryukova, Marc R. Friedländer, Chammiran Daniel, Marie Öhman

J Biol Chem. 2022 Mar; 298(3): 101682. Published online 2022 Feb 3. doi: 10.1016/j.jbc.2022.101682

PMCID:: PMC8892144

Abstract Article PDF–1.7M

Select item 62940013.

miR-122 removal in the liver activates imprinted microRNAs and enables more effective microRNA-mediated gene repression

Paul N. Valdmanis, Hak Kyun Kim, Kirk Chu, Feijie Zhang, Jianpeng Xu, Elizabeth M. Munding, Jia Shen, Mark A. Kay

Nat Commun. 2018; 9: 5321. Published online 2018 Dec 14. doi: 10.1038/s41467-018-07786-7

PMCID:: PMC6294001

Abstract Article PDF–859K

Select item 46042524.

The Dlx5 and Foxg1 transcription factors, linked via miRNA-9 and -200, are required for the development of the olfactory and GnRH system

Giulia Garaffo, Daniele Conte, Paolo Provero, Daniela Tomaiuolo, Zheng Luo, Patrizia Pinciroli, Clelia Peano, Ilaria D'Atri, Yorick Gitton, Talya Etzion, Yoav Gothilf, Dafne Gays, Massimo M. Santoro, Giorgio R. Merlo

Mol Cell Neurosci. 2015 Sep; 68: 103–119. doi: 10.1016/j.mcn.2015.04.007

PMCID:: PMC4604252

Abstract Article

Select item 44793815.

Deregulation of MiR-34b/Sox2 Predicts Prostate Cancer Progression

Irene Forno, Stefano Ferrero, Maria Veronica Russo, Giacomo Gazzano, Sara Giangiobbe, Emanuele Montanari, Alberto Del Nero, Bernardo Rocco, Giancarlo Albo, Lucia R. Languino, Dario C. Altieri, Valentina Vaira, Silvano Bosari

PLoS One. 2015; 10(6): e0130060. Published online 2015 Jun 24. doi: 10.1371/journal.pone.0130060

PMCID:: PMC4479381

Abstract Article PDF–7.0M

Select item 42825086.

The miR-379/miR-410 cluster at the imprinted Dlk1-Dio3 domain controls neonatal metabolic adaptation

Stéphane Labialle, Virginie Marty, Marie-Line Bortolin-Cavaillé, Magali Hoareau-Osman, Jean-Philippe Pradère, Philippe Valet, Pascal GP Martin, Jérôme Cavaillé

EMBO J. 2014 Oct 1; 33(19): 2216–2230. Published online 2014 Aug 14. doi: 10.15252/embj.201387038

PMCID:: PMC4282508

Abstract Article PDF–1.8M

Select item 35219017.

Analysis of miR-376 RNA cluster members in the mouse inner ear

Denise Yan, Yazhi Xing, Xiaomei Ouyang, Juhong Zhu, Zheng-yi Chen, Hainan Lang, Xue Z Liu

Int J Exp Pathol. 2012 Dec; 93(6): 450–457. Published online 2012 Nov 8. doi: 10.1111/j.1365-2613.2012.00840.x

PMCID:: PMC3521901

Abstract Article PDF–568K

Select item 34092618.

A-to-I editing of microRNAs in the mammalian brain increases during development

Ylva Ekdahl, Hossein Shahrabi Farahani, Mikaela Behm, Jens Lagergren, Marie Öhman

Genome Res. 2012 Aug; 22(8): 1477–1487. doi: 10.1101/gr.131912.111

PMCID:: PMC3409261

Abstract Article PDF–700K

Select item 31101549.

Recent acquisition of imprinting at the rodent Sfmbt2 locus correlates with insertion of a large block of miRNAs

Qianwei Wang, Jacqueline Chow, Jenny Hong, Anne Ferguson Smith, Carol Moreno, Peter Seaby, Paul Vrana, Kamelia Miri, Joon Tak, Eu Ddeum Chung, Gabriela Mastromonaco, Isabella Caniggia, Susannah Varmuza

BMC Genomics. 2011; 12: 204. Published online 2011 Apr 21. doi: 10.1186/1471-2164-12-204

PMCID:: PMC3110154

Abstract Article PDF–2.1M

Select item 302253410.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 301365511.

miRBase: integrating microRNA annotation and deep-sequencing data

Ana Kozomara, Sam Griffiths-Jones

Nucleic Acids Res. 2011 Jan; 39(Database issue): D152–D157. Published online 2010 Oct 30. doi: 10.1093/nar/gkq1027

PMCID:: PMC3013655

Abstract Article PDF–5.1M

Select item 295341812.

Redirection of Silencing Targets by Adenosine-to-Inosine Editing of miRNAs

Yukio Kawahara, Boris Zinshteyn, Praveen Sethupathy, Hisashi Iizasa, Artemis G. Hatzigeorgiou, Kazuko Nishikura

Science. Author manuscript; available in PMC 2010 Oct 12.

Published in final edited form as: Science. 2007 Feb 23; 315(5815): 1137–1140. doi: 10.1126/science.1138050

PMCID:: PMC2953418

Abstract Article PDF–926K

Select item 288286813.

MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing

Hyo Won Ahn, Ryan D. Morin, Han Zhao, Ronald A. Harris, Cristian Coarfa, Zi-Jiang Chen, Aleksandar Milosavljevic, Marco A. Marra, Aleksandar Rajkovic

Mol Hum Reprod. 2010 Jul; 16(7): 463–471. Published online 2010 Mar 9. doi: 10.1093/molehr/gaq017

PMCID:: PMC2882868

Abstract Article PDF–392K

Select item 286721414.

Mammalian microRNAs: experimental evaluation of novel and previously annotated genes

H. Rosaria Chiang, Lori W. Schoenfeld, J. Graham Ruby, Vincent C. Auyeung, Noah Spies, Daehyun Baek, Wendy K. Johnston, Carsten Russ, Shujun Luo, Joshua E. Babiarz, Robert Blelloch, Gary P. Schroth, Chad Nusbaum, David P. Bartel

Genes Dev. 2010 May 15; 24(10): 992–1009. doi: 10.1101/gad.1884710

PMCID:: PMC2867214

Abstract Article PDF–2.2M

Select item 268123115.

A Mammalian microRNA Expression Atlas Based on Small RNA Library Sequencing

Pablo Landgraf, Mirabela Rusu, Robert Sheridan, Alain Sewer, Nicola Iovino, Alexei Aravin, Sébastien Pfeffer, Amanda Rice, Alice O. Kamphorst, Markus Landthaler, Carolina Lin, Nicholas D. Socci, Leandro Hermida, Valerio Fulci, Sabina Chiaretti, Robin Foà, Julia Schliwka, Uta Fuchs, Astrid Novosel, Roman-Ulrich Müller, Bernhard Schermer, Ute Bissels, Jason Inman, Quang Phan, Minchen Chien, David B. Weir, Ruchi Choksi, Gabriella De Vita, Daniela Frezzetti, Hans-Ingo Trompeter, Veit Hornung, Grace Teng, Gunther Hartmann, Miklos Palkovits, Roberto Di Lauro, Peter Wernet, Giuseppe Macino, Charles E. Rogler, James W. Nagle, Jingyue Ju, F. Nina Papavasiliou, Thomas Benzing, Peter Lichter, Wayne Tam, Michael J. Brownstein, Andreas Bosio, Arndt Borkhardt, James J. Russo, Chris Sander, Mihaela Zavolan, Thomas Tuschl

Cell. Author manuscript; available in PMC 2009 May 13.

Published in final edited form as: Cell. 2007 Jun 29; 129(7): 1401–1414. doi: 10.1016/j.cell.2007.04.040

PMCID:: PMC2681231

Abstract Article PDF–2.5M

Select item 182093816.

Maternal microRNAs are essential for mouse zygotic development

Fuchou Tang, Masahiro Kaneda, Dónal O’Carroll, Petra Hajkova, Sheila C. Barton, Y. Andrew Sun, Caroline Lee, Alexander Tarakhovsky, Kaiqin Lao, M. Azim Surani

Genes Dev. 2007 Mar 15; 21(6): 644–648. doi: 10.1101/gad.418707

PMCID:: PMC1820938

Abstract Article PDF–433K

Select item 134747417.

miRBase: microRNA sequences, targets and gene nomenclature

Sam Griffiths-Jones, Russell J. Grocock, Stijn van Dongen, Alex Bateman, Anton J. Enright

Nucleic Acids Res. 2006 Jan 1; 34(Database issue): D140–D144. Published online 2005 Dec 28. doi: 10.1093/nar/gkj112

PMCID:: PMC1347474

Abstract Article PDF–245K

Select item 131534118.

Identification of clustered microRNAs using an ab initio prediction method

Alain Sewer, Nicodème Paul, Pablo Landgraf, Alexei Aravin, Sébastien Pfeffer, Michael J Brownstein, Thomas Tuschl, Erik van Nimwegen, Mihaela Zavolan

BMC Bioinformatics. 2005; 6: 267. Published online 2005 Nov 7. doi: 10.1186/1471-2105-6-267

PMCID:: PMC1315341

Abstract Article PDF–518K

Select item 51532019.

A Large Imprinted microRNA Gene Cluster at the Mouse Dlk1-Gtl2 Domain

Hervé Seitz, Hélène Royo, Marie-Line Bortolin, Shau-Ping Lin, Anne C. Ferguson-Smith, Jérôme Cavaillé

Genome Res. 2004 Sep; 14(9): 1741–1748. doi: 10.1101/gr.2743304

PMCID:: PMC515320

Abstract Article PDF–332K

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