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Items: 20

1.
The Deubiquitinating Enzyme USP48 Interacts with the Retinal Degeneration-Associated Proteins UNC119a and ARL3
Laura Sánchez-Bellver, Andrea Férriz-Gordillo, Marc Carrillo-Pz, Laura Rabanal, Francesc R. Garcia-Gonzalo, Gemma Marfany
Int J Mol Sci. 2022 Oct; 23(20): 12527. Published online 2022 Oct 19. doi: 10.3390/ijms232012527
PMCID:
PMC9603860
AbstractArticlePDF–3.4M
2.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
3.
Absence of S100A4 in the mouse lens induces an aberrant retina-specific differentiation program and cataract
Rupalatha Maddala, Junyuan Gao, Richard T. Mathias, Tylor R. Lewis, Vadim Y. Arshavsky, Adriana Levine, Jonathan M. Backer, Anne R. Bresnick, Ponugoti V. Rao
Sci Rep. 2021; 11: 2203. Published online 2021 Jan 26. doi: 10.1038/s41598-021-81611-y
PMCID:
PMC7838418
AbstractArticlePDF–6.5M
4.
Foxn4 is a temporal identity factor conferring mid/late-early retinal competence and involved in retinal synaptogenesis
Shuting Liu, Xiaoning Liu, Shengguo Li, Xiuting Huang, Haohua Qian, Kangxin Jin, Mengqing Xiang
Proc Natl Acad Sci U S A. 2020 Mar 3; 117(9): 5016–5027. Published online 2020 Feb 18. doi: 10.1073/pnas.1918628117
PMCID:
PMC7060670
AbstractArticlePDF–4.2M
5.
The role of the Rx homeobox gene in retinal progenitor proliferation and cell fate specification
HM Rodgers, VJ Huffman, VA Voronina, M Lewandoski, PH Mathers
Mech Dev. Author manuscript; available in PMC 2019 Jun 1.
Published in final edited form as: Mech Dev. 2018 Jun; 151: 18–29. Published online 2018 Apr 14. doi: 10.1016/j.mod.2018.04.003
PMCID:
PMC5972075
AbstractArticlePDF–2.5M
6.
Onecut1 and Onecut2 redundantly regulate early retinal cell fates during development
Darshan Sapkota, Hemabindu Chintala, Fuguo Wu, Steven J. Fliesler, Zihua Hu, Xiuqian Mu
Proc Natl Acad Sci U S A. 2014 Sep 30; 111(39): E4086–E4095. Published online 2014 Sep 16. doi: 10.1073/pnas.1405354111
PMCID:
PMC4191802
AbstractArticlePDF–3.6M
7.
Absence of Synaptic Regulation by Phosducin in Retinal Slices
James H. Long, Vadim Y. Arshavsky, Marie E. Burns
PLoS One. 2013; 8(12): e83970. Published online 2013 Dec 20. doi: 10.1371/journal.pone.0083970
PMCID:
PMC3869837
AbstractArticlePDF–647K
8.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
9.
Phosphorylation of Phosducin Accelerates Rod Recovery from Transducin Translocation
Marycharmain Belcastro, Hongman Song, Satyabrata Sinha, Chunyan Song, Peter H Mathers, Maxim Sokolov
Invest Ophthalmol Vis Sci. 2012 May; 53(6): 3084–3091. Published online 2012 May 21. doi: 10.1167/iovs.11-8798
PMCID:
PMC3382380
AbstractArticlePDF–645K
10.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
11.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
12.
Phosducin Regulates Transmission at thePhotoreceptor-to-ON-Bipolar Cell Synapse
Rolf Herrmann, Ekaterina S. Lobanova, Timothy Hammond, Christopher Kessler, Marie E. Burns, Laura J. Frishman, Vadim Y. Arshavsky
J Neurosci. 2010 Mar 3; 30(9): 3239–3253. doi: 10.1523/JNEUROSCI.4775-09.2010
PMCID:
PMC2927985
AbstractArticlePDF–8.2M
13.
Transducin γ-Subunit Sets Expression Levels of α- and β-Subunits and Is Crucial for Rod Viability
Ekaterina S. Lobanova, Stella Finkelstein, Rolf Herrmann, Yen-Ming Chen, Christopher Kessler, Norman A. Michaud, Lynn H. Trieu, Katherine J. Strissel, Marie E. Burns, Vadim Y. Arshavsky
J Neurosci. 2008 Mar 26; 28(13): 3510–3520. doi: 10.1523/JNEUROSCI.0338-08.2008
PMCID:
PMC2795350
AbstractArticlePDF–721K
14.
Phosducin influences sympathetic activity and prevents stress-induced hypertension in humans and mice
Nadine Beetz, Michael D. Harrison, Marc Brede, Xiangang Zong, Michal J. Urbanski, Anika Sietmann, Jennifer Kaufling, Michel Barrot, Mathias W. Seeliger, Maria Augusta Vieira-Coelho, Pavel Hamet, Daniel Gaudet, Ondrej Seda, Johanne Tremblay, Theodore A. Kotchen, Mary Kaldunski, Rolf Nüsing, Bela Szabo, Howard J. Jacob, Allen W. Cowley, Jr., Martin Biel, Monika Stoll, Martin J. Lohse, Ulrich Broeckel, Lutz Hein
J Clin Invest. 2009 Dec 1; 119(12): 3597–3612. Published online 2009 Nov 23. doi: 10.1172/JCI38433
Correction in:
J Clin Invest. 2011 Jan 4; 121(1): 454.
PMCID:
PMC2786789
AbstractArticlePDF–3.0M
15.
DOPAMINE MODULATES DIURNAL AND CIRCADIAN RHYTHMS OF PROTEIN PHOSPHORYLATION IN PHOTORECEPTOR CELLS OF MOUSE RETINA
Nikita Pozdeyev, Gianluca Tosini, Li Li, Fatima Ali, Stanislav Rozov, Rehwa H. Lee, P. Michael Iuvone
Eur J Neurosci. Author manuscript; available in PMC 2009 Jan 1.
Published in final edited form as: Eur J Neurosci. 2008; 27: 2691–2700. doi: 10.1111/j.1460-9568.2008.06224.x
PMCID:
PMC2440701
AbstractArticlePDF–1.9M
16.
Phosducin Regulates the Expression of Transducin βγ Subunits in Rod Photoreceptors and Does Not Contribute to Phototransduction Adaptation
Claudia M. Krispel, Maxim Sokolov, Yen-Ming Chen, Hongman Song, Rolf Herrmann, Vadim Y. Arshavsky, Marie E. Burns
J Gen Physiol. 2007 Sep; 130(3): 303–312. doi: 10.1085/jgp.200709812
PMCID:
PMC2151643
AbstractArticlePDF–1.3M
17.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
18.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
19.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
20.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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