U.S. flag

An official website of the United States government

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Links from GEO Profiles

Items: 1 to 20 of 52

1.
TRIM21-dependent target protein ubiquitination mediates cell-free Trim-Away
Tycho E.T. Mevissen, Anisa V. Prasad, Johannes C. Walter
Cell Rep. Author manuscript; available in PMC 2023 Oct 23.
Published in final edited form as: Cell Rep. 2023 Feb 28; 42(2): 112125. Published online 2023 Feb 18. doi: 10.1016/j.celrep.2023.112125
PMCID:
PMC10435667
AbstractArticlePDF–2.3M
2.
Trim-Away ubiquitinates and degrades lysine-less and N-terminally acetylated substrates
Leo Kiss, Tyler Rhinesmith, Jakub Luptak, Claire F. Dickson, Jonas Weidenhausen, Shannon Smyly, Ji-Chun Yang, Sarah L. Maslen, Irmgard Sinning, David Neuhaus, Dean Clift, Leo C. James
Nat Commun. 2023; 14: 2160. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37504-x
PMCID:
PMC10105713
AbstractArticlePDF–4.2M
3.
The UAS thioredoxin-like domain of UBXN7 regulates E3 ubiquitin ligase activity of RNF111/Arkadia
Sadek Amhaz, Batiste Boëda, Mouna Chouchène, Sabrina Colasse, Florent Dingli, Damarys Loew, Julien Henri, Céline Prunier, Laurence Levy
BMC Biol. 2023; 21: 73. Published online 2023 Apr 7. doi: 10.1186/s12915-023-01576-4
PMCID:
PMC10080908
AbstractArticlePDF–3.2M
4.
Phosphorylation of OTUB1 at Tyr 26 stabilizes the mTORC1 component, Raptor
Seung Un Seo, Seon Min Woo, Min Wook Kim, Eun-Woo Lee, Kyoung-jin Min, Taeg Kyu Kwon
Cell Death Differ. 2023 Jan; 30(1): 82–93. Published online 2022 Aug 4. doi: 10.1038/s41418-022-01047-3
PMCID:
PMC9883261
AbstractArticlePDF–4.6M
5.
Divergent self-association properties of paralogous proteins TRIM2 and TRIM3 regulate their E3 ligase activity
Diego Esposito, Jane Dudley-Fraser, Acely Garza-Garcia, Katrin Rittinger
Nat Commun. 2022; 13: 7583. Published online 2022 Dec 8. doi: 10.1038/s41467-022-35300-7
PMCID:
PMC9732051
AbstractArticlePDF–4.5M
6.
TRIM7 Restricts Coxsackievirus and Norovirus Infection by Detecting the C-Terminal Glutamine Generated by 3C Protease Processing
Jakub Luptak, Donna L. Mallery, Aminu S. Jahun, Anna Albecka, Dean Clift, Osaid Ather, Greg Slodkowicz, Ian Goodfellow, Leo C. James
Viruses. 2022 Aug; 14(8): 1610. Published online 2022 Jul 23. doi: 10.3390/v14081610
PMCID:
PMC9394474
AbstractArticlePDF–3.1M
7.
E3 ubiquitin ligase RBX1 drives the metastasis of triple negative breast cancer through a FBXO45-TWIST1-dependent degradation mechanism
Jun Shao, Qian Feng, Weifan Jiang, Yuting Yang, Zhiqiang Liu, Liang Li, Wenlong Yang, Yufeng Zou
Aging (Albany NY) 2022 Jul 15; 14(13): 5493–5510. Published online 2022 Jul 8. doi: 10.18632/aging.204163
PMCID:
PMC9320552
AbstractArticlePDF–1.8M
8.
Antibody toolkit reveals N-terminally ubiquitinated substrates of UBE2W
Christopher W. Davies, Simon E. Vidal, Lilian Phu, Jawahar Sudhamsu, Trent B. Hinkle, Scott Chan Rosenberg, Frances-Rose Schumacher, Yi Jimmy Zeng, Carsten Schwerdtfeger, Andrew S. Peterson, Jennie R. Lill, Christopher M. Rose, Andrey S. Shaw, Ingrid E. Wertz, Donald S. Kirkpatrick, James T. Koerber
Nat Commun. 2021; 12: 4608. Published online 2021 Jul 29. doi: 10.1038/s41467-021-24669-6
PMCID:
PMC8322077
AbstractArticlePDF–2.7M
9.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
10.
Prognostic value of ubiquitin E2 UBE2W and its correlation with tumor-infiltrating immune cells in breast cancer
Yan Yuan, Wei-Wei Xiao, Wei-Hao Xie, Rong-Zhen Li, Yuan-Hong Gao
BMC Cancer. 2021; 21: 479. Published online 2021 Apr 30. doi: 10.1186/s12885-021-08234-4
PMCID:
PMC8086329
AbstractArticlePDF–5.0M
11.
UbcH5 Interacts with Substrates to Participate in Lysine Selection with the E3 Ubiquitin Ligase CHIP
Adam Kanack, Vinayak Vittal, Holly Haver, Theodore Keppel, Rebekah L. Gundry, Rachel E. Klevit, Kenneth Matthew Scaglione
Biochemistry. Author manuscript; available in PMC 2021 Jun 9.
Published in final edited form as: Biochemistry. 2020 Jun 9; 59(22): 2078–2088. Published online 2020 May 27. doi: 10.1021/acs.biochem.0c00084
PMCID:
PMC7780428
AbstractArticlePDF–2.6M
12.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
13.
N-Terminal Ubiquitination of Amyloidogenic Proteins Triggers Removal of Their Oligomers by the Proteasome Holoenzyme
Yu Ye, David Klenerman, Daniel Finley
J Mol Biol. 2020 Jan 17; 432(2): 585–596. doi: 10.1016/j.jmb.2019.08.021
PMCID:
PMC6990400
AbstractArticlePDF–1.3M
14.
Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations
Robert Fragoza, Jishnu Das, Shayne D. Wierbowski, Jin Liang, Tina N. Tran, Siqi Liang, Juan F. Beltran, Christen A. Rivera-Erick, Kaixiong Ye, Ting-Yi Wang, Li Yao, Matthew Mort, Peter D. Stenson, David N. Cooper, Xiaomu Wei, Alon Keinan, John C. Schimenti, Andrew G. Clark, Haiyuan Yu
Nat Commun. 2019; 10: 4141. Published online 2019 Sep 12. doi: 10.1038/s41467-019-11959-3
PMCID:
PMC6742646
AbstractArticlePDF–1.2M
15.
Cbl interacts with multiple E2s in vitro and in cells
Mariya S. Liyasova, Ke Ma, Donna Voeller, Philip E. Ryan, Jinqiu Chen, Rachel E. Klevit, Stanley Lipkowitz
PLoS One. 2019; 14(5): e0216967. Published online 2019 May 23. doi: 10.1371/journal.pone.0216967
PMCID:
PMC6533038
AbstractArticlePDF–2.4M
16.
Trivalent RING Assembly on Retroviral Capsids Activates TRIM5 Ubiquitination and Innate Immune Signaling
Adam J. Fletcher, Marina Vaysburd, Sarah Maslen, Jingwei Zeng, J. Mark Skehel, Greg J. Towers, Leo C. James
Cell Host Microbe. 2018 Dec 12; 24(6): 761–775.e6. doi: 10.1016/j.chom.2018.10.007
PMCID:
PMC6299210
AbstractArticle
17.
The MALDI-TOF E2/E3 Ligase Assay as Universal Tool for Drug Discovery in the Ubiquitin Pathway
Virginia De Cesare, Clare Johnson, Victoria Barlow, James Hastie, Axel Knebel, Matthias Trost
Cell Chem Biol. 2018 Sep 20; 25(9): 1117–1127.e4. doi: 10.1016/j.chembiol.2018.06.004
PMCID:
PMC6162346
AbstractArticle
18.
Real-time tracking of complex ubiquitination cascades using a fluorescent confocal on-bead assay
Joanna Koszela, Nhan T. Pham, David Evans, Stefan Mann, Irene Perez-Pi, Steven Shave, Derek F. J. Ceccarelli, Frank Sicheri, Mike Tyers, Manfred Auer
BMC Biol. 2018; 16: 88. Published online 2018 Aug 10. doi: 10.1186/s12915-018-0554-z
PMCID:
PMC6086040
AbstractArticlePDF–1.4M
19.
Structural insights into the nanomolar affinity of RING E3 ligase ZNRF1 for Ube2N and its functional implications
Adaitya Prasad Behera, Pritam Naskar, Shubhangi Agarwal, Prerana Agarwal Banka, Asim Poddar, Ajit B. Datta
Biochem J. 2018 May 15; 475(9): 1569–1582. Prepublished online 2018 Apr 6. Published online 2018 May 9. doi: 10.1042/BCJ20170909
Correction in:
Biochem J. 2019 Sep 13; 476(17): 2515–2516.
PMCID:
PMC5941314
AbstractArticlePDF–2.2M
20.
Structure and catalytic activation of the TRIM23 RING E3 ubiquitin ligase
Daria M. Dawidziak, Jacint G. Sanchez, Jonathan M. Wagner, Barbie K. Ganser-Pornillos, Owen Pornillos
Proteins. Author manuscript; available in PMC 2018 Oct 1.
Published in final edited form as: Proteins. 2017 Oct; 85(10): 1957–1961. Published online 2017 Jul 24. doi: 10.1002/prot.25348
PMCID:
PMC5638660
AbstractArticlePDF–881K

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Filter your results:

Find related data

Recent activity

You are here: NCBI > Literature > PubMed Central (PMC)
Support Center