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Select item 101231001.

Single-molecule visualization of stalled replication-fork rescue by the Escherichia coli Rep helicase

Kelsey S Whinn, Zhi-Qiang Xu, Slobodan Jergic, Nischal Sharma, Lisanne M Spenkelink, Nicholas E Dixon, Antoine M van Oijen, Harshad Ghodke

Nucleic Acids Res. 2023 Apr 24; 51(7): 3307–3326. Published online 2023 Mar 20. doi: 10.1093/nar/gkad186

PMCID:: PMC10123100

Abstract Article PDF–3.4M

Select item 89416372.

Regulation of E. coli Rep Helicase Activity by PriC

Binh Nguyen, Min Kyung Shinn, Elizabeth Weiland, Timothy M. Lohman

J Mol Biol. Author manuscript; available in PMC 2022 Jul 23.

Published in final edited form as: J Mol Biol. 2021 Jul 23; 433(15): 167072. Published online 2021 Jun 1. doi: 10.1016/j.jmb.2021.167072

PMCID:: PMC8941637

Abstract Article PDF–2.0M

Select item 73378993.

E. coli Rep helicase and RecA recombinase unwind G4 DNA and are important for resistance to G4-stabilizing ligands

Tapas Paul, Andrew F Voter, Rachel R Cueny, Momčilo Gavrilov, Taekjip Ha, James L Keck, Sua Myong

Nucleic Acids Res. 2020 Jul 9; 48(12): 6640–6653. Published online 2020 May 25. doi: 10.1093/nar/gkaa442

PMCID:: PMC7337899

Abstract Article PDF–3.1M

Select item 66148394.

Single-molecule live cell imaging of Rep reveals the dynamic interplay between an accessory replicative helicase and the replisome

Aisha H Syeda, Adam J M Wollman, Alex L Hargreaves, Jamieson A L Howard, Jan-Gert Brüning, Peter McGlynn, Mark C Leake

Nucleic Acids Res. 2019 Jul 9; 47(12): 6287–6298. Published online 2019 Apr 27. doi: 10.1093/nar/gkz298

PMCID:: PMC6614839

Abstract Article PDF–1.3M

Select item 65474295.

Direct removal of RNA polymerase barriers to replication by accessory replicative helicases

Michelle Hawkins, Juachi U Dimude, Jamieson A L Howard, Abigail J Smith, Mark S Dillingham, Nigel J Savery, Christian J Rudolph, Peter McGlynn

Nucleic Acids Res. 2019 Jun 4; 47(10): 5100–5113. Published online 2019 Mar 14. doi: 10.1093/nar/gkz170

PMCID:: PMC6547429

Abstract Article PDF–3.0M

Select item 64121106.

Regulation of Rep helicase unwinding by an auto-inhibitory subdomain

Monika A Makurath, Kevin D Whitley, Binh Nguyen, Timothy M Lohman, Yann R Chemla

Nucleic Acids Res. 2019 Mar 18; 47(5): 2523–2532. Published online 2019 Jan 23. doi: 10.1093/nar/gkz023

PMCID:: PMC6412110

Abstract Article PDF–9.7M

Select item 45265287.

Are the SSB-Interacting Proteins RecO, RecG, PriA and the DnaB-Interacting Protein Rep Bound to Progressing Replication Forks in Escherichia coli?

Esma Bentchikou, Carine Chagneau, Emilie Long, Mélody Matelot, Jean-François Allemand, Bénédicte Michel

PLoS One. 2015; 10(8): e0134892. Published online 2015 Aug 5. doi: 10.1371/journal.pone.0134892

PMCID:: PMC4526528

Abstract Article PDF–1.1M

Select item 41238558.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 30862089.

Escherichia coli Rep DNA helicase and error-prone DNA polymerase IV interact physically and functionally

Thomas E. Sladewski, Kyle M. Hetrick, Patricia L. Foster

Mol Microbiol. Author manuscript; available in PMC 2012 Apr 1.

Published in final edited form as: Mol Microbiol. 2011 Apr; 80(2): 524–541. Published online 2011 Mar 7. doi: 10.1111/j.1365-2958.2011.07590.x

PMCID:: PMC3086208

Abstract Article PDF–3.3M

Select item 280703310.

Rep Provides a Second Motor at the Replisome to Promote Duplication of Protein-Bound DNA

Colin P. Guy, John Atkinson, Milind K. Gupta, Akeel A. Mahdi, Emma J. Gwynn, Christian J. Rudolph, Peter B. Moon, Ingeborg C. van Knippenberg, Chris J. Cadman, Mark S. Dillingham, Robert G. Lloyd, Peter McGlynn

Mol Cell. 2009 Nov 25; 36(4): 654–666. doi: 10.1016/j.molcel.2009.11.009

PMCID:: PMC2807033

Abstract Article

Select item 277010111.

The helicases DinG, Rep and UvrD cooperate to promote replication across transcription units in vivo

Hasna Boubakri, Anne Langlois de Septenville, Enrique Viguera, Bénédicte Michel

EMBO J. 2010 Jan 6; 29(1): 145–157. Published online 2009 Oct 22. doi: 10.1038/emboj.2009.308

Correction in:: EMBO J. 2010 Jan 6; 29(1): 278.

PMCID:: PMC2770101

Abstract Article PDF–731K

Select item 276172912.

Single Molecule Nanocontainers Made Porous Using a Bacterial Toxin

Burak Okumus, Sinan Arslan, Stephanus M. Fengler, Sua Myong, Taekjip Ha

J Am Chem Soc. 2009 Oct 21; 131(41): 14844–14849. Published online 2009 Sep 29. doi: 10.1021/ja9042356

PMCID:: PMC2761729

Abstract Article PDF–2.0M

Select item 251953913.

UvrD and UvrD252 Counteract RecQ, RecJ, and RecFOR in a rep Mutant of Escherichia coli

Roxane Lestini, Bénédicte Michel

J Bacteriol. 2008 Sep; 190(17): 5995–6001. Published online 2008 Jun 20. doi: 10.1128/JB.00620-08

PMCID:: PMC2519539

Abstract Article PDF–144K

Select item 191339714.

σ^E Regulates and Is Regulated by a Small RNA in Escherichia coli

Karl M. Thompson, Virgil A. Rhodius, Susan Gottesman

J Bacteriol. 2007 Jun; 189(11): 4243–4256. Published online 2007 Apr 6. doi: 10.1128/JB.00020-07

PMCID:: PMC1913397

Abstract Article PDF–390K

Select item 179730915.

Genome-Wide Screening of Genes Required for Swarming Motility in Escherichia coli K-12

Tetsuyoshi Inoue, Ryuji Shingaki, Shotaro Hirose, Kaori Waki, Hirotada Mori, Kazuhiro Fukui

J Bacteriol. 2007 Feb; 189(3): 950–957. Published online 2006 Nov 22. doi: 10.1128/JB.01294-06

PMCID:: PMC1797309

Abstract Article PDF–141K

Select item 168148116.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 146110417.

Multiple genetic pathways for restarting DNA replication forks in Escherichia coli K-12.

S J Sandler

Genetics. 2000 Jun; 155(2): 487–497. doi: 10.1093/genetics/155.2.487

PMCID:: PMC1461104

Summary PDF–194K

Select item 144959818.

Requirements for Replication Restart Proteins During Constitutive Stable DNA Replication in Escherichia coli K-12

Steven J. Sandler

Genetics. 2005 Apr; 169(4): 1799–1806. doi: 10.1534/genetics.104.036962

PMCID:: PMC1449598

Abstract Article PDF–119K

Select item 138352619.

RuvAB is essential for replication forks reversal in certain replication mutants

Zeynep Baharoglu, Mirjana Petranovic, Maria-Jose Flores, Bénédicte Michel

EMBO J. 2006 Feb 8; 25(3): 596–604. Published online 2006 Jan 19. doi: 10.1038/sj.emboj.7600941

PMCID:: PMC1383526

Abstract Article PDF–270K

Select item 132520020.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405