PMC Links for GEO Profiles (Select 116033808) - PMC - NCBI

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Items: 18

Select item 49823791.

Mutation of the Enterohemorrhagic Escherichia coli Core LPS Biosynthesis Enzyme RfaD Confers Hypersusceptibility to Host Intestinal Innate Immunity In vivo

Cheng-Ju Kuo, Jenn-Wei Chen, Hao-Chieh Chiu, Ching-Hao Teng, Tai-I Hsu, Pei-Jung Lu, Wan-Jr Syu, Sin-Tian Wang, Ting-Chen Chou, Chang-Shi Chen

Front Cell Infect Microbiol. 2016; 6: 82. Published online 2016 Aug 12. doi: 10.3389/fcimb.2016.00082

PMCID:: PMC4982379

Abstract Article PDF–6.1M

Select item 25698522.

Lipopolysaccharide Endotoxins

Christian R. H. Raetz, Chris Whitfield

Annu Rev Biochem. Author manuscript; available in PMC 2008 Oct 17.

Published in final edited form as: Annu Rev Biochem. 2002; 71: 635–700. Published online 2001 Nov 9. doi: 10.1146/annurev.biochem.71.110601.135414

PMCID:: PMC2569852

Abstract Article PDF–4.2M

Select item 17973093.

Genome-Wide Screening of Genes Required for Swarming Motility in Escherichia coli K-12

Tetsuyoshi Inoue, Ryuji Shingaki, Shotaro Hirose, Kaori Waki, Hirotada Mori, Kazuhiro Fukui

J Bacteriol. 2007 Feb; 189(3): 950–957. Published online 2006 Nov 22. doi: 10.1128/JB.01294-06

PMCID:: PMC1797309

Abstract Article PDF–141K

Select item 16814814.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 14570525.

Large-scale identification of protein–protein interaction of Escherichia coli K-12

Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori

Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806

PMCID:: PMC1457052

Abstract Article PDF–536K

Select item 13252006.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405

PMCID:: PMC1325200

Abstract Article PDF–204K

Select item 5324157.

Activation of the gab Operon in an RpoS-Dependent Manner by Mutations That Truncate the Inner Core of Lipopolysaccharide in Escherichia coli

Moses L. Joloba, Katy M. Clemmer, Darren D. Sledjeski, Philip N. Rather

J Bacteriol. 2004 Dec; 186(24): 8542–8546. doi: 10.1128/JB.186.24.8542-8546.2004

PMCID:: PMC532415

Abstract Article PDF–124K

Select item 3729308.

Genetics of lipopolysaccharide biosynthesis in enteric bacteria.

C A Schnaitman, J D Klena

Microbiol Rev. 1993 Sep; 57(3): 655–682. doi: 10.1128/mr.57.3.655-682.1993

PMCID:: PMC372930

Summary Page Browse PDF–6.6M

Select item 3284689.

The htrM gene, whose product is essential for Escherichia coli viability only at elevated temperatures, is identical to the rfaD gene.

S Raina, C Georgopoulos

Nucleic Acids Res. 1991 Jul 25; 19(14): 3811–3819. doi: 10.1093/nar/19.14.3811

PMCID:: PMC328468

Summary Page Browse PDF–2.0M

Select item 30821210.

Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes.

H J Sofia, V Burland, D L Daniels, G Plunkett, 3rd, F R Blattner

Nucleic Acids Res. 1994 Jul 11; 22(13): 2576–2586. doi: 10.1093/nar/22.13.2576

PMCID:: PMC308212

Summary Page Browse PDF–2.3M

Select item 21803711.

Two mutations which affect the barrier function of the Escherichia coli K-12 outer membrane.

W G Coleman, Jr, L Leive

J Bacteriol. 1979 Sep; 139(3): 899–910. doi: 10.1128/jb.139.3.899-910.1979

PMCID:: PMC218037

Summary Page Browse PDF–1.8M

Select item 21502812.

New cysE-pyrE-linked rfa mutation in Escherichia coli K-12 that results in a heptoseless lipopolysaccharide.

W G Coleman, Jr, K S Deshpande

J Bacteriol. 1985 Mar; 161(3): 1209–1214. doi: 10.1128/jb.161.3.1209-1214.1985

PMCID:: PMC215028

Summary Page Browse PDF–1.2M

Select item 21330013.

Cloning, expression, and characterization of the Escherichia coli K-12 rfaD gene.

J C Pegues, L S Chen, A W Gordon, L Ding, W G Coleman, Jr

J Bacteriol. 1990 Aug; 172(8): 4652–4660. doi: 10.1128/jb.172.8.4652-4660.1990

PMCID:: PMC213300

Summary Page Browse PDF–2.0M

Select item 21250114.

Physical maps of the rfa loci of Escherichia coli K-12 and Salmonella typhimurium.

C A Schnaitman, C T Parker, J D Klena, E L Pradel, N B Pearson, K E Sanderson, P R MacClachlan

J Bacteriol. 1991 Dec; 173(23): 7410–7411. doi: 10.1128/jb.173.23.7410-7411.1991

PMCID:: PMC212501

Summary Page Browse PDF–391K

Select item 20627115.

Comparison of lipopolysaccharide biosynthesis genes rfaK, rfaL, rfaY, and rfaZ of Escherichia coli K-12 and Salmonella typhimurium.

J D Klena, E Pradel, C A Schnaitman

J Bacteriol. 1992 Jul; 174(14): 4746–4752. doi: 10.1128/jb.174.14.4746-4752.1992

PMCID:: PMC206271

Summary Page Browse PDF–1.4M

Select item 20599316.

Genetic analysis of the genes involved in synthesis of the lipopolysaccharide core in Escherichia coli K-12: three operons in the rfa locus.

C Roncero, M J Casadaban

J Bacteriol. 1992 May; 174(10): 3250–3260. doi: 10.1128/jb.174.10.3250-3260.1992

PMCID:: PMC205993

Summary Page Browse PDF–2.1M

Select item 20536217.

Molecular analysis of the rfaD gene, for heptose synthesis, and the rfaF gene, for heptose transfer, in lipopolysaccharide synthesis in Salmonella typhimurium.

D M Sirisena, P R MacLachlan, S L Liu, A Hessel, K E Sanderson

J Bacteriol. 1994 Apr; 176(8): 2379–2385. doi: 10.1128/jb.176.8.2379-2385.1994

PMCID:: PMC205362

Summary Page Browse PDF–1.3M

Select item 13958518.

Biosynthesis Pathway of ADP-l-glycero-β-d-manno-Heptose in Escherichia coli

Bernd Kneidinger, Cristina Marolda, Michael Graninger, Alla Zamyatina, Fiona McArthur, Paul Kosma, Miguel A. Valvano, Paul Messner

J Bacteriol. 2002 Jan; 184(2): 363–369. doi: 10.1128/JB.184.2.363-369.2002

PMCID:: PMC139585

Abstract Article PDF–274K

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