PMC Links for GEO Profiles (Select 116037920) - PMC

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Items: 11

Select item 41238551.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 22921772.

Protein abundance profiling of the Escherichia coli cytosol

Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman

BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102

PMCID:: PMC2292177

Abstract Article PDF–1.0M

Select item 16814813.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 16362194.

Time-Dependent Proteome Alterations under Osmotic Stress during Aerobic and Anaerobic Growth in Escherichia coli

Arnim Weber, Stephanie A. Kögl, Kirsten Jung

J Bacteriol. 2006 Oct; 188(20): 7165–7175. doi: 10.1128/JB.00508-06

PMCID:: PMC1636219

Abstract Article PDF–424K

Select item 14570525.

Large-scale identification of protein–protein interaction of Escherichia coli K-12

Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori

Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806

PMCID:: PMC1457052

Abstract Article PDF–536K

Select item 13252006.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405

PMCID:: PMC1325200

Abstract Article PDF–204K

Select item 10639997.

Genome-Wide Analysis of the General Stress Response Network in Escherichia coli: σ^S-Dependent Genes, Promoters, and Sigma Factor Selectivity

Harald Weber, Tino Polen, Johanna Heuveling, Volker F. Wendisch, Regine Hengge

J Bacteriol. 2005 Mar; 187(5): 1591–1603. doi: 10.1128/JB.187.5.1591-1603.2005

PMCID:: PMC1063999

Abstract Article PDF–370K

Select item 3105798.

Analysis of the Escherichia coli genome. IV. DNA sequence of the region from 89.2 to 92.8 minutes.

F R Blattner, V Burland, G Plunkett, 3rd, H J Sofia, D L Daniels

Nucleic Acids Res. 1993 Nov 25; 21(23): 5408–5417. doi: 10.1093/nar/21.23.5408

PMCID:: PMC310579

Summary Page Browse PDF–1.8M

Select item 1939709.

Genome-Wide Analyses Revealing a Signaling Network of the RcsC-YojN-RcsB Phosphorelay System in Escherichia coli

Daisuke Hagiwara, Masahito Sugiura, Taku Oshima, Hirotada Mori, Hirofumi Aiba, Takafumi Yamashino, Takeshi Mizuno

J Bacteriol. 2003 Oct; 185(19): 5735–5746. doi: 10.1128/JB.185.19.5735-5746.2003

PMCID:: PMC193970

Abstract Article PDF–451K

Select item 17953410.

Methods for generating precise deletions and insertions in the genome of wild-type Escherichia coli: application to open reading frame characterization.

A J Link, D Phillips, G M Church

J Bacteriol. 1997 Oct; 179(20): 6228–6237. doi: 10.1128/jb.179.20.6228-6237.1997

PMCID:: PMC179534

Summary PDF–5.5M

Select item 12227811.

An NMR approach to structural proteomics

Adelinda Yee, Xiaoqing Chang, Antonio Pineda-Lucena, Bin Wu, Anthony Semesi, Brian Le, Theresa Ramelot, Gregory M. Lee, Sudeepa Bhattacharyya, Pablo Gutierrez, Aleksej Denisov, Chang-Hun Lee, John R. Cort, Guennadi Kozlov, Jack Liao, Grzegorz Finak, Limin Chen, David Wishart, Weontae Lee, Lawrence P. McIntosh, Kalle Gehring, Michael A. Kennedy, Aled M. Edwards, Cheryl H. Arrowsmith

Proc Natl Acad Sci U S A. 2002 Feb 19; 99(4): 1825–1830. doi: 10.1073/pnas.042684599