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Items: 10

1.
Membranome: a database for proteome-wide analysis of single-pass membrane proteins
Andrei L. Lomize, Mikhail A. Lomize, Shean R. Krolicki, Irina D. Pogozheva
Nucleic Acids Res. 2017 Jan 4; 45(Database issue): D250–D255. Published online 2016 Aug 10. doi: 10.1093/nar/gkw712
PMCID:
PMC5210604
AbstractArticlePDF–1.7M
2.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
3.
Large-scale identification of protein–protein interaction of Escherichia coli K-12
Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori
Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806
PMCID:
PMC1457052
AbstractArticlePDF–536K
4.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K
5.
The PD-(D/E)XK superfamily revisited: identification of new members among proteins involved in DNA metabolism and functional predictions for domains of (hitherto) unknown function
Jan Kosinski, Marcin Feder, Janusz M Bujnicki
BMC Bioinformatics. 2005; 6: 172. Published online 2005 Jul 12. doi: 10.1186/1471-2105-6-172
PMCID:
PMC1189080
AbstractArticlePDF–1.9M
6.
Nucleotide sequence of the Escherichia coli uridine phosphorylase (udp) gene.
L Walton, C A Richards, L P Elwell
Nucleic Acids Res. 1989 Aug 25; 17(16): 6741. doi: 10.1093/nar/17.16.6741
PMCID:
PMC318381
SummaryPage BrowsePDF–111K
7.
Factors Influencing the Identification of Transcription Factor Binding Sites by Cross-Species Comparison
Lee Ann McCue, William Thompson, C. Steven Carmack, Charles E. Lawrence
Genome Res. 2002 Oct; 12(10): 1523–1532. doi: 10.1101/gr.323602
PMCID:
PMC187528
AbstractArticlePDF–192K
8.
Holliday junction resolvases and related nucleases: identification of new families, phyletic distribution and evolutionary trajectories
L. Aravind, Kira S. Makarova, Eugene V. Koonin
Nucleic Acids Res. 2000 Sep 15; 28(18): 3417–3432. doi: 10.1093/nar/28.18.3417
PMCID:
PMC110722
AbstractArticlePDF–3.3M
9.
LuxArray, a High-Density, Genomewide Transcription Analysis of Escherichia coli Using Bioluminescent Reporter Strains
Tina K. Van Dyk, Ellen J. DeRose, Gregory E. Gonye
J Bacteriol. 2001 Oct; 183(19): 5496–5505. doi: 10.1128/JB.183.19.5496-5505.2001
PMCID:
PMC95439
AbstractArticlePDF–941K
10.
A functional update of the Escherichia coli K-12 genome
Margrethe H Serres, Shuba Gopal, Laila A Nahum, Ping Liang, Terry Gaasterland, Monica Riley
Genome Biol. 2001; 2(9): research0035.1–research0035.7. Published online 2001 Aug 20. doi: 10.1186/gb-2001-2-9-research0035
PMCID:
PMC56896
AbstractArticlePDF–87K

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