PMC Links for GEO Profiles (Select 116518138) - PMC

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 76695625.

Keratin 13 Deficiency Causes White Sponge Nevus in Mice

Laura Simonson, Samantha Vold, Colton Mowers, Randall J Massey, Irene M Ong, B. Jack Longley, Hao Chang

Dev Biol. Author manuscript; available in PMC 2021 Dec 1.

Published in final edited form as: Dev Biol. 2020 Dec 1; 468(1-2): 146–153. Published online 2020 Aug 3. doi: 10.1016/j.ydbio.2020.07.016

PMCID:: PMC7669562

Abstract Article PDF–2.2M

Select item 73637066.

Sox21 Regulates Anapc10 Expression and Determines the Fate of Ectodermal Organ

Kan Saito, Frederic Michon, Aya Yamada, Hiroyuki Inuzuka, Satoko Yamaguchi, Emiko Fukumoto, Keigo Yoshizaki, Takashi Nakamura, Makiko Arakaki, Yuta Chiba, Masaki Ishikawa, Hideyuki Okano, Irma Thesleff, Satoshi Fukumoto

iScience. 2020 Jul 24; 23(7): 101329. Published online 2020 Jun 30. doi: 10.1016/j.isci.2020.101329

PMCID:: PMC7363706

Abstract Article PDF–9.9M

Select item 71824327.

Chloride channels regulate differentiation and barrier functions of the mammalian airway

Mu He, Bing Wu, Wenlei Ye, Daniel D Le, Adriane W Sinclair, Valeria Padovano, Yuzhang Chen, Ke-Xin Li, Rene Sit, Michelle Tan, Michael J Caplan, Norma Neff, Yuh Nung Jan, Spyros Darmanis, Lily Yeh Jan

eLife. 2020; 9: e53085. Published online 2020 Apr 14. doi: 10.7554/eLife.53085

PMCID:: PMC7182432

Abstract Article PDF–3.3M

Select item 69212458.

Polycomb Repressive Complex 1 Controls Maintenance of Fungiform Papillae by Repressing Sonic Hedgehog Expression

Carmit Bar, Idan Cohen, Dejian Zhao, Venu Pothula, Anna Litskevitch, Haruhiko Koseki, Deyou Zheng, Elena Ezhkova

Cell Rep. Author manuscript; available in PMC 2019 Dec 19.

Published in final edited form as: Cell Rep. 2019 Jul 2; 28(1): 257–266.e5. doi: 10.1016/j.celrep.2019.06.011

PMCID:: PMC6921245

Abstract Article PDF–1.0M

Select item 62441839.

Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells

Sunyuan Zhang, Nicholas A. Williamson, Marie A. Bogoyevitch

Sci Data. 2018; 5: 180262. Published online 2018 Nov 20. doi: 10.1038/sdata.2018.262

PMCID:: PMC6244183

Abstract Article PDF–753K

Select item 619134410.

FOXF1 Transcription Factor Promotes Lung Morphogenesis by Inducing Cellular Proliferation in Fetal Lung Mesenchyme

Vladimir Ustiyan, Craig Bolte, Yufang Zhang, Lu Han, Yan Xu, Katherine E. Yutzey, Aaron M. Zorn, Tanya V. Kalin, John M. Shannon, Vladimir V. Kalinichenko

Dev Biol. Author manuscript; available in PMC 2019 Nov 1.

Published in final edited form as: Dev Biol. 2018 Nov 1; 443(1): 50–63. Published online 2018 Aug 25. doi: 10.1016/j.ydbio.2018.08.011

PMCID:: PMC6191344

Abstract Article PDF–3.3M

Select item 586277111.

A CRISPR-based screen for Hedgehog signaling provides insights into ciliary function and ciliopathies

David K. Breslow, Sascha Hoogendoorn, Adam R. Kopp, David W. Morgens, Brandon K. Vu, Margaret C. Kennedy, Kyuho Han, Amy Li, Gaelen T. Hess, Michael C. Bassik, James K. Chen, Maxence V. Nachury

Nat Genet. Author manuscript; available in PMC 2018 Aug 19.

Published in final edited form as: Nat Genet. 2018 Mar; 50(3): 460–471. Published online 2018 Feb 19. doi: 10.1038/s41588-018-0054-7

PMCID:: PMC5862771

Abstract Article PDF–2.5M

Select item 538122612.

Fancd2 in vivo interaction network reveals a non-canonical role in mitochondrial function

Tingting Zhang, Wei Du, Andrew F. Wilson, Satoshi H. Namekawa, Paul R. Andreassen, Amom Ruhikanta Meetei, Qishen Pang

Sci Rep. 2017; 7: 45626. Published online 2017 Apr 5. doi: 10.1038/srep45626

PMCID:: PMC5381226

Abstract Article PDF–1.4M

Select item 483681913.

Identification of a Novel Proto-oncogenic Network in Head and Neck Squamous Cell Carcinoma

Smitha R. Georgy, Michael Cangkrama, Seema Srivastava, Darren Partridge, Alana Auden, Sebastian Dworkin, Catriona A. McLean, Stephen M. Jane, Charbel Darido

J Natl Cancer Inst. 2015 Sep; 107(9): djv152. Published online 2015 Jun 10. doi: 10.1093/jnci/djv152

PMCID:: PMC4836819

Abstract Article PDF–28M

Select item 444092414.

An illustrated anatomical ontology of the developing mouse lower urogenital tract

Kylie M. Georgas, Jane Armstrong, Janet R. Keast, Christine E. Larkins, Kirk M. McHugh, E. Michelle Southard-Smith, Martin J. Cohn, Ekatherina Batourina, Hanbin Dan, Kerry Schneider, Dennis P. Buehler, Carrie B. Wiese, Jane Brennan, Jamie A. Davies, Simon D. Harding, Richard A. Baldock, Melissa H. Little, Chad M. Vezina, Cathy Mendelsohn

Development. 2015 May 15; 142(10): 1893–1908. doi: 10.1242/dev.117903

PMCID:: PMC4440924

Abstract Article

Select item 424506915.

Eyelid Closure in Embryogenesis Is Required for Ocular Adnexa Development

Qinghang Meng, Maureen Mongan, Vinicius Carreira, Hisaka Kurita, Chia-yang Liu, Winston W.-Y. Kao, Ying Xia

Invest Ophthalmol Vis Sci. 2014 Nov; 55(11): 7652–7661. Published online 2014 Nov 26. doi: 10.1167/iovs.14-15155

PMCID:: PMC4245069

Abstract Article PDF–1.2M

Select item 357241016.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 338306517.

Mapping the Nephronophthisis-Joubert-Meckel-Gruber Protein Network Reveals Ciliopathy Disease Genes and Pathways

Liyun Sang, Julie J. Miller, Kevin C. Corbit, Rachel H. Giles, Matthew J. Brauer, Edgar A. Otto, Lisa M. Baye, Xiaohui Wen, Suzie J. Scales, Mandy Kwong, Erik G. Huntzicker, Mindan K. Sfakianos, Wendy Sandoval, J. Fernando Bazan, Priya Kulkarni, Francesc R. Garcia-Gonzalo, Allen D. Seol, John F. O'Toole, Susanne Held, Heiko M. Reutter, William S. Lane, Muhammad Arshad Rafiq, Abdul Noor, Muhammad Ansar, Akella Radha Rama Devi, Val C. Sheffield, Diane C. Slusarski, John B. Vincent, Daniel A. Doherty, Friedhelm Hildebrandt, Jeremy F. Reiter, Peter K. Jackson

Cell. Author manuscript; available in PMC 2012 Jun 26.

Published in final edited form as: Cell. 2011 May 13; 145(4): 513–528. doi: 10.1016/j.cell.2011.04.019

PMCID:: PMC3383065

Abstract Article PDF–2.0M

Select item 317805918.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 304709519.

Kaposi sarcoma-associated herpesvirus-encoded viral FLICE inhibitory protein (vFLIP) K13 cooperates with Myc to promote lymphoma in mice

Anwaar Ahmad, Jason S Groshong, Hittu Matta, Sandra Schamus, Vasu Punj, Lisa J Robinson, Parkash S Gill, Preet M Chaudhary

Cancer Biol Ther. 2010 Nov 15; 10(10): 1033–1040. Published online 2010 Nov 15. doi: 10.4161/cbt.10.10.13291

PMCID:: PMC3047095

Abstract Article PDF–14M

Select item 302253420.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

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