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Items: 15

1.
PBRM-1/PBAF-regulated genes in a multipotent progenitor in Caenorhabditis elegans
Laura D Mathies, Andrew C Kim, Evan M Soukup, Alan’da E Thomas, Jill C Bettinger
G3 (Bethesda) 2024 Mar; 14(3): jkad297. Published online 2023 Dec 27. doi: 10.1093/g3journal/jkad297
PMCID:
PMC10917506
AbstractArticlePDF–16M
2.
Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly
Marcos Schaan Profes, Araven Tiroumalechetty, Neel Patel, Stephanie S. Lauar, Simone Sidoli, Peri T. Kurshan
PLoS Biol. 2024 Jan; 22(1): e3002466. Published online 2024 Jan 22. doi: 10.1371/journal.pbio.3002466
PMCID:
PMC10802952
AbstractArticlePDF–2.7M
3.
SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans
Valerie J. Robert, Matthieu Caron, Loic Gely, Annie Adrait, Victoria Pakulska, Yohann Couté, Manon Chevalier, Christian G. Riedel, Cecile Bedet, Francesca Palladino
Development. 2023 Nov 1; 150(21): dev201755. Published online 2023 Oct 17. doi: 10.1242/dev.201755
PMCID:
PMC10617626
AbstractArticle
4.
A transcriptional cofactor regulatory network for the C. elegans intestine
Brent B Horowitz, Shivani Nanda, Albertha J M Walhout
G3 (Bethesda) 2023 Jul; 13(7): jkad096. Published online 2023 Apr 29. doi: 10.1093/g3journal/jkad096
PMCID:
PMC10320766
AbstractArticlePDF–1.9M
5.
Transcription factors regulating the fate and developmental potential of a multipotent progenitor in Caenorhabditis elegans
Evan M Soukup, Jill C Bettinger, Laura D Mathies
G3 (Bethesda) 2022 Nov; 12(11): jkac232. Published online 2022 Sep 5. doi: 10.1093/g3journal/jkac232
PMCID:
PMC9635636
AbstractArticlePDF–866K
6.
Binding specificity and function of the SWI/SNF subunit SMARCA4 bromodomain interaction with acetylated histone H3K14
Paul Enríquez, Krzysztof Krajewski, Brian D. Strahl, Scott B. Rothbart, Robert H. Dowen, Robert B. Rose
J Biol Chem. 2021 Oct; 297(4): 101145. Published online 2021 Aug 30. doi: 10.1016/j.jbc.2021.101145
PMCID:
PMC8506967
AbstractArticlePDF–3.2M
7.
Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules
Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus
eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833
PMCID:
PMC8331183
AbstractArticlePDF–8.5M
8.
EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes
Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili
Nat Methods. Author manuscript; available in PMC 2021 Mar 26.
Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4
PMCID:
PMC7995176
AbstractArticlePDF–1.0M
9.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M
10.
SWI/SNF chromatin remodeling regulates alcohol response behaviors in Caenorhabditis elegans and is associated with alcohol dependence in humans
Laura D. Mathies, GinaMari G. Blackwell, Makeda K. Austin, Alexis C. Edwards, Brien P. Riley, Andrew G. Davies, Jill C. Bettinger
Proc Natl Acad Sci U S A. 2015 Mar 10; 112(10): 3032–3037. Published online 2015 Feb 23. doi: 10.1073/pnas.1413451112
PMCID:
PMC4364201
AbstractArticlePDF–862K
11.
Caenorhabditis elegans SWI/SNF Subunits Control Sequential Developmental Stages in the Somatic Gonad
Edward E. Large, Laura D. Mathies
G3 (Bethesda) 2014 Mar; 4(3): 471–483. Published online 2014 Jan 8. doi: 10.1534/g3.113.009852
PMCID:
PMC3962486
AbstractArticlePDF–1.9M
12.
The Conserved PBAF Nucleosome-Remodeling Complex Mediates the Response to Stress in Caenorhabditis elegans
Aleksandra Kuzmanov, Evguenia I. Karina, Natalia V. Kirienko, David S. Fay
Mol Cell Biol. 2014 Mar; 34(6): 1121–1135. doi: 10.1128/MCB.01502-13
PMCID:
PMC3958046
AbstractArticlePDF–2.8M
13.
OrthoList: A Compendium of C. elegans Genes with Human Orthologs
Daniel D. Shaye, Iva Greenwald
PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085
Correction in:
PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.
PMCID:
PMC3102077
AbstractArticlePDF–530K
14.
Involvement of Global Genome Repair, Transcription Coupled Repair, and Chromatin Remodeling in UV DNA Damage Response Changes during Development
Hannes Lans, Jurgen A. Marteijn, Björn Schumacher, Jan H. J. Hoeijmakers, Gert Jansen, Wim Vermeulen
PLoS Genet. 2010 May; 6(5): e1000941. Published online 2010 May 6. doi: 10.1371/journal.pgen.1000941
PMCID:
PMC2865526
AbstractArticlePDF–3.7M
15.
The candidate MAP kinase phosphorylation substrate DPL-1 (DP) promotes expression of the MAP kinase phosphatase LIP-1 in C. elegans germ cells
Baiqing Lin, Valerie Reinke
Dev Biol. Author manuscript; available in PMC 2009 Apr 1.
Published in final edited form as: Dev Biol. 2008 Apr 1; 316(1): 50–61. Published online 2008 Jan 8. doi: 10.1016/j.ydbio.2007.12.042
PMCID:
PMC2359152
AbstractArticlePDF–2.5M

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