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Items: 1 to 20 of 45

1.
Topoisomerases I and II facilitate condensin DC translocation to organize and repress X chromosomes in C. elegans
Ana Karina Morao, Jun Kim, Daniel Obaji, Siyu Sun, Sevinc Ercan
Mol Cell. Author manuscript; available in PMC 2023 Nov 17.
Published in final edited form as: Mol Cell. 2022 Nov 17; 82(22): 4202–4217.e5. Published online 2022 Oct 26. doi: 10.1016/j.molcel.2022.10.002
PMCID:
PMC9837612
AbstractArticlePDF–3.0M
2.
Condensin DC loads and spreads from recruitment sites to create loop-anchored TADs in C. elegans
Jun Kim, David S Jimenez, Bhavana Ragipani, Bo Zhang, Lena A Street, Maxwell Kramer, Sarah E Albritton, Lara H Winterkorn, Ana K Morao, Sevinc Ercan
eLife. 2022; 11: e68745. Published online 2022 Nov 4. doi: 10.7554/eLife.68745
PMCID:
PMC9635877
AbstractArticlePDF–4.8M
3.
Inducible degradation of dosage compensation protein DPY-27 facilitates isolation of Caenorhabditis elegans males for molecular and biochemical analyses
Qianyan Li, Arshdeep Kaur, Benjamin Mallory, Sara Hariri, JoAnne Engebrecht
G3 (Bethesda) 2022 May; 12(5): jkac085. Published online 2022 Apr 11. doi: 10.1093/g3journal/jkac085
PMCID:
PMC9073673
AbstractArticlePDF–1.5M
4.
Dual roles for nuclear RNAi Argonautes in Caenorhabditis elegans dosage compensation
Michael B Davis, Eshna Jash, Bahaar Chawla, Rebecca A Haines, Lillian E Tushman, Ryan Troll, Györgyi Csankovszki
Genetics. 2022 May; 221(1): iyac033. Published online 2022 Mar 2. doi: 10.1093/genetics/iyac033
PMCID:
PMC9071528
AbstractArticlePDF–1.3M
5.
The histone H4 lysine 20 demethylase DPY-21 regulates the dynamics of condensin DC binding
Laura Breimann, Ana Karina Morao, Jun Kim, David Sebastian Jimenez, Nina Maryn, Krishna Bikkasani, Michael J. Carrozza, Sarah E. Albritton, Maxwell Kramer, Lena Annika Street, Kustrim Cerimi, Vic-Fabienne Schumann, Ella Bahry, Stephan Preibisch, Andrew Woehler, Sevinç Ercan
J Cell Sci. 2022 Jan 15; 135(2): jcs258818. Published online 2022 Jan 26. doi: 10.1242/jcs.258818
PMCID:
PMC8917352
AbstractArticle
6.
EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes
Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili
Nat Methods. Author manuscript; available in PMC 2021 Mar 26.
Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4
PMCID:
PMC7995176
AbstractArticlePDF–1.0M
7.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M
8.
An SMC-like protein binds and regulates Caenorhabditis elegans condensins
Lucy Fang-I Chao, Meha Singh, James Thompson, John R. Yates, III, Kirsten A. Hagstrom
PLoS Genet. 2017 Mar; 13(3): e1006614. Published online 2017 Mar 16. doi: 10.1371/journal.pgen.1006614
PMCID:
PMC5373644
AbstractArticlePDF–4.4M
9.
X-Chromosome dosage compensation.
Barbara J Meyer
WormBook. 2005 : 1–14. Published online 2005 Jun 25. doi: 10.1895/wormbook.1.8.1
PMCID:
PMC4781388
AbstractArticle
10.
The evolution of nematode sex determination: C. elegans as a reference point for comparative biology.
Eric S Haag
WormBook. 2005 : 1–14. Published online 2005 Dec 29. doi: 10.1895/wormbook.1.120.1
PMCID:
PMC4781019
AbstractArticle
11.
Developmental Dynamics of X-Chromosome Dosage Compensation by the DCC and H4K20me1 in C. elegans
Maxwell Kramer, Anna-Lena Kranz, Amanda Su, Lara H. Winterkorn, Sarah Elizabeth Albritton, Sevinc Ercan
PLoS Genet. 2015 Dec; 11(12): e1005698. Published online 2015 Dec 7. doi: 10.1371/journal.pgen.1005698
Correction in:
PLoS Genet. 2016 Feb; 12(2): e1005899.
PMCID:
PMC4671695
AbstractArticlePDF–5.8M
12.
SUMOylation is essential for sex-specific assembly and function of the Caenorhabditis elegans dosage compensation complex on X chromosomes
Rebecca R. Pferdehirt, Barbara J. Meyer
Proc Natl Acad Sci U S A. 2013 Oct 1; 110(40): E3810–E3819. Published online 2013 Sep 16. doi: 10.1073/pnas.1315793110
PMCID:
PMC3791726
AbstractArticlePDF–1.6M
13.
A Highly Efficient Multifunctional Tandem Affinity Purification Approach Applicable to Diverse Organisms
Hanhui Ma, Janel R. McLean, Lucy Fang-I Chao, Sebastian Mana-Capelli, Murugan Paramasivam, Kirsten A. Hagstrom, Kathleen L. Gould, Dannel McCollum
Mol Cell Proteomics. 2012 Aug; 11(8): 501–511. Published online 2012 Apr 3. doi: 10.1074/mcp.O111.016246
PMCID:
PMC3412978
AbstractArticlePDF–528K
14.
Regulation of DCC Localization by HTZ-1/H2A.Z and DPY-30 Does not Correlate with H3K4 Methylation Levels
Emily Petty, Emily Laughlin, Györgyi Csankovszki
PLoS One. 2011; 6(10): e25973. Published online 2011 Oct 5. doi: 10.1371/journal.pone.0025973
PMCID:
PMC3187824
AbstractArticlePDF–2.4M
15.
Systematic bias in high-throughput sequencing data and its correction by BEADS
Ming-Sin Cheung, Thomas A. Down, Isabel Latorre, Julie Ahringer
Nucleic Acids Res. 2011 Aug; 39(15): e103. Published online 2011 Jun 6. doi: 10.1093/nar/gkr425
PMCID:
PMC3159482
AbstractArticlePDF–4.7M
16.
OrthoList: A Compendium of C. elegans Genes with Human Orthologs
Daniel D. Shaye, Iva Greenwald
PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085
Correction in:
PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.
PMCID:
PMC3102077
AbstractArticlePDF–530K
17.
An MLL/COMPASS subunit functions in the C. elegans dosage compensation complex to target X chromosomes for transcriptional regulation of gene expression
Rebecca R. Pferdehirt, William S. Kruesi, Barbara J. Meyer
Genes Dev. 2011 Mar 1; 25(5): 499–515. doi: 10.1101/gad.2016011
PMCID:
PMC3049290
AbstractArticlePDF–1.9M
18.
Genome-Wide Identification of Binding Sites Defines Distinct Functions for Caenorhabditis elegans PHA-4/FOXA in Development and Environmental Response
Mei Zhong, Wei Niu, Zhi John Lu, Mihail Sarov, John I. Murray, Judith Janette, Debasish Raha, Karyn L. Sheaffer, Hugo Y. K. Lam, Elicia Preston, Cindie Slightham, LaDeana W. Hillier, Trisha Brock, Ashish Agarwal, Raymond Auerbach, Anthony A. Hyman, Mark Gerstein, Susan E. Mango, Stuart K. Kim, Robert H. Waterston, Valerie Reinke, Michael Snyder
PLoS Genet. 2010 Feb; 6(2): e1000848. Published online 2010 Feb 19. doi: 10.1371/journal.pgen.1000848
PMCID:
PMC2824807
AbstractArticlePDF–628K
19.
Condensins Regulate Meiotic DNA Break Distribution, thus Crossover Frequency, by Controlling Chromosome Structure
David G. Mets, Barbara J. Meyer
Cell. Author manuscript; available in PMC 2010 Apr 2.
Published in final edited form as: Cell. 2009 Oct 2; 139(1): 73–86. Published online 2009 Sep 24. doi: 10.1016/j.cell.2009.07.035
PMCID:
PMC2785808
AbstractArticlePDF–3.2M
20.
The C. elegans dosage compensation complex propagates along chromatin dynamically and independently of X-chromosome sequence
Sevinç Ercan, Lindsay L. Dick, Jason D. Lieb
Curr Biol. Author manuscript; available in PMC 2010 Nov 17.
Published in final edited form as: Curr Biol. 2009 Nov 17; 19(21): 1777–1787. Published online 2009 Oct 22. doi: 10.1016/j.cub.2009.09.047
PMCID:
PMC2783177
AbstractArticlePDF–2.5M

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