PMC Links for GEO Profiles (Select 117092579) - PMC

Result Filters

Links from GEO Profiles

Items: 1 to 20 of 34

<< First< Prev

Page of 2

Select item 108029521.

Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly

Marcos Schaan Profes, Araven Tiroumalechetty, Neel Patel, Stephanie S. Lauar, Simone Sidoli, Peri T. Kurshan

PLoS Biol. 2024 Jan; 22(1): e3002466. Published online 2024 Jan 22. doi: 10.1371/journal.pbio.3002466

PMCID:: PMC10802952

Abstract Article PDF–2.7M

Select item 107611212.

CCAR-1 works together with the U2AF large subunit UAF-1 to regulate alternative splicing

Doreen I. Lugano, Lindsey N. Barrett, Dale Chaput, Margaret A. Park, Sandy D. Westerheide

RNA Biol. 2024; 21(1): 1–11. Published online 2023 Dec 21. doi: 10.1080/15476286.2023.2289707

PMCID:: PMC10761121

Abstract Article PDF–2.5M

Select item 106176263.

SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans

Valerie J. Robert, Matthieu Caron, Loic Gely, Annie Adrait, Victoria Pakulska, Yohann Couté, Manon Chevalier, Christian G. Riedel, Cecile Bedet, Francesca Palladino

Development. 2023 Nov 1; 150(21): dev201755. Published online 2023 Oct 17. doi: 10.1242/dev.201755

PMCID:: PMC10617626

Abstract Article

Select item 97196044.

Phase behavior of disordered proteins underlying low density and high permeability of liquid organelles

Ming-Tzo Wei, Shana Elbaum-Garfinkle, Alex S. Holehouse, Carlos Chih-Hsiung Chen, Marina Feric, Craig B. Arnold, Rodney D. Priestley, Rohit V. Pappu, Clifford P. Brangwynne

Nat Chem. Author manuscript; available in PMC 2022 Dec 4.

Published in final edited form as: Nat Chem. 2017 Nov; 9(11): 1118–1125. Published online 2017 Jun 26. doi: 10.1038/nchem.2803

PMCID:: PMC9719604

Abstract Article PDF–1.3M

Select item 96337085.

RG/RGG repeats in the C. elegans homologs of Nucleolin and GAR1 contribute to sub-nucleolar phase separation

Emily L. Spaulding, Alexis M. Feidler, Lio A. Cook, Dustin L. Updike

Nat Commun. 2022; 13: 6585. Published online 2022 Nov 3. doi: 10.1038/s41467-022-34225-5

PMCID:: PMC9633708

Abstract Article PDF–6.8M

Select item 94378486.

Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans

Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono

J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343

PMCID:: PMC9437848

Abstract Article PDF–2.0M

Select item 93225937.

Incorporation and Assembly of a Light-Emitting Enzymatic Reaction into Model Protein Condensates

Muyang Guan, Mikael V. Garabedian, Marcel Leutenegger, Benjamin S. Schuster, Matthew C. Good, Daniel A. Hammer

Biochemistry. Author manuscript; available in PMC 2022 Jul 26.

Published in final edited form as: Biochemistry. 2021 Oct 26; 60(42): 3137–3151. Published online 2021 Oct 14. doi: 10.1021/acs.biochem.1c00373

PMCID:: PMC9322593

Abstract Article PDF–1.9M

Select item 84492608.

Improved CRISPR/Cas9 knock-in efficiency via the self-excising cassette (SEC) selection method in C. elegans

George Huang, Bailey de Jesus, Alex Koh, Sara Blanco, Aubrie Rettmann, Ella DeMott, Melynda Sylvester, Cassie Ren, Carrie Meng, Skye Waterland, Anita Rhodes, Persephone Alicea, Abbey Flynn, Daniel J Dickinson, Ryan Doonan

MicroPubl Biol. 2021; 2021: 10.17912/micropub.biology.000460. Published online 2021 Sep 16. doi: 10.17912/micropub.biology.000460

PMCID:: PMC8449260

Abstract Article PDF–5.7M

Select item 84467939.

Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling

Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono

J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094

Correction in:: J Biol Chem. 2022 Jun; 298(6): 102081.

PMCID:: PMC8446793

Abstract Article PDF–1.6M

Select item 833118310.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 799517611.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 726101712.

Identifying sequence perturbations to an intrinsically disordered protein that determine its phase-separation behavior

Benjamin S. Schuster, Gregory L. Dignon, Wai Shing Tang, Fleurie M. Kelley, Aishwarya Kanchi Ranganath, Craig N. Jahnke, Alison G. Simpkins, Roshan Mammen Regy, Daniel A. Hammer, Matthew C. Good, Jeetain Mittal

Proc Natl Acad Sci U S A. 2020 May 26; 117(21): 11421–11431. Published online 2020 May 11. doi: 10.1073/pnas.2000223117

PMCID:: PMC7261017

Abstract Article PDF–2.0M

Select item 681818513.

Quantifying Dynamics in Phase-Separated Condensates Using Fluorescence Recovery after Photobleaching

Nicole O. Taylor, Ming-Tzo Wei, Howard A. Stone, Clifford P. Brangwynne

Biophys J. 2019 Oct 1; 117(7): 1285–1300. Published online 2019 Aug 30. doi: 10.1016/j.bpj.2019.08.030

PMCID:: PMC6818185

Abstract Article PDF–2.5M

Select item 677930914.

The P Granules of C. elegans: A Genetic Model for the Study of RNA–Protein Condensates

Geraldine Seydoux

J Mol Biol. Author manuscript; available in PMC 2019 Nov 2.

Published in final edited form as: J Mol Biol. 2018 Nov 2; 430(23): 4702–4710. Published online 2018 Aug 8. doi: 10.1016/j.jmb.2018.08.007

PMCID:: PMC6779309

Abstract Article PDF–573K

Select item 674675615.

Identification of proteins and miRNAs that specifically bind an mRNA in vivo

Kathrin Theil, Koshi Imami, Nikolaus Rajewsky

Nat Commun. 2019; 10: 4205. Published online 2019 Sep 16. doi: 10.1038/s41467-019-12050-7

PMCID:: PMC6746756

Abstract Article PDF–6.8M

Select item 668884116.

Methods and Strategies to Quantify Phase Separation of Disordered Proteins

Alfredo Vidal Ceballos, Charles J. McDonald, Shana Elbaum-Garfinkle

Methods Enzymol. Author manuscript; available in PMC 2019 Aug 9.

Published in final edited form as: Methods Enzymol. 2018; 611: 31–50. Published online 2018 Nov 3. doi: 10.1016/bs.mie.2018.09.037

PMCID:: PMC6688841

Abstract Article PDF–1.2M

Select item 621659017.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 606536618.

Controllable protein phase separation and modular recruitment to form responsive membraneless organelles

Benjamin S. Schuster, Ellen H. Reed, Ranganath Parthasarathy, Craig N. Jahnke, Reese M. Caldwell, Jessica G. Bermudez, Holly Ramage, Matthew C. Good, Daniel A. Hammer

Nat Commun. 2018; 9: 2985. Published online 2018 Jul 30. doi: 10.1038/s41467-018-05403-1